RNA–Protein interactions for RNA: ENST00000580949.1

PTPRM-213, Transcript of protein tyrosine phosphatase, receptor type M, humanhuman

TSL 3

Gene PTPRM, Length 687 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRM-213ENST00000580949 THOC7Q6I9Y2 204 aaKnown RBP5.04□□□□□ -1.6
PTPRM-213ENST00000580949 HCP5Q6MZN7 132 aa5.04□□□□□ -1.6
PTPRM-213ENST00000580949 SLC7A5P1Q8MH63 180 aa5.04□□□□□ -1.6
PTPRM-213ENST00000580949 CD300LFQ8TDQ1 290 aa5.04□□□□□ -1.6
PTPRM-213ENST00000580949 PCNPQ8WW12 178 aaKnown RBP5.04□□□□□ -1.6
PTPRM-213ENST00000580949 R3HDM4Q96D70 268 aa5.04□□□□□ -1.6
PTPRM-213ENST00000580949 S1PR3Q99500 378 aa5.04□□□□□ -1.6
PTPRM-213ENST00000580949 CCL19Q99731 98 aa5.04□□□□□ -1.6
PTPRM-213ENST00000580949 MRPL20Q9BYC9 149 aaKnown RBP5.04□□□□□ -1.6
PTPRM-213ENST00000580949 BPESC1Q9GZL8 116 aa5.04□□□□□ -1.6
PTPRM-213ENST00000580949 PLEKHA2Q9HB19 425 aa5.04□□□□□ -1.6
PTPRM-213ENST00000580949 COA4Q9NYJ1 87 aa5.04□□□□□ -1.6
PTPRM-213ENST00000580949 NSG2Q9Y328 171 aa5.04□□□□□ -1.6
PTPRM-213ENST00000580949 IGHV2-26A0A0B4J1V2 119 aa5.03□□□□□ -1.6
PTPRM-213ENST00000580949 KANTRA0A1W2PQU2 76 aa5.03□□□□□ -1.6
PTPRM-213ENST00000580949 MARCH11A6NNE9 402 aa5.03□□□□□ -1.6
PTPRM-213ENST00000580949 SRRM4A7MD48 611 aaKnown RBP5.03□□□□□ -1.6
PTPRM-213ENST00000580949 VWC2LB2RUY7 222 aa5.03□□□□□ -1.6
PTPRM-213ENST00000580949 H0YJW9 148 aa5.03□□□□□ -1.6
PTPRM-213ENST00000580949 LY6LH3BQJ8 138 aa5.03□□□□□ -1.6
PTPRM-213ENST00000580949 J3KRW8 73 aa5.03□□□□□ -1.6
PTPRM-213ENST00000580949 SSSCA1O60232 199 aa5.03□□□□□ -1.6
PTPRM-213ENST00000580949 GPR137BO60478 399 aa5.03□□□□□ -1.6
PTPRM-213ENST00000580949 CRYZL1O95825 349 aa5.03□□□□□ -1.6
PTPRM-213ENST00000580949 HPRT1P00492 218 aa5.03□□□□□ -1.6
PTPRM-213ENST00000580949 RBP4P02753 201 aa5.03□□□□□ -1.6
PTPRM-213ENST00000580949 IGKV1-16P04430 117 aa5.03□□□□□ -1.6
PTPRM-213ENST00000580949 LIPFP07098 398 aa5.03□□□□□ -1.6
PTPRM-213ENST00000580949 IL6RP08887 468 aaPredicted RBP5.03□□□□□ -1.6
PTPRM-213ENST00000580949 OR9G9P0C7N8 305 aa5.03□□□□□ -1.6
PTPRM-213ENST00000580949 PET100P0DJ07 73 aa5.03□□□□□ -1.6
PTPRM-213ENST00000580949 MMP9P14780 707 aa5.03□□□□□ -1.6
PTPRM-213ENST00000580949 C4BPBP20851 252 aa5.03□□□□□ -1.6
PTPRM-213ENST00000580949 COX7A1P24310 79 aa5.03□□□□□ -1.6
PTPRM-213ENST00000580949 KIR2DS2P43631 304 aa5.03□□□□□ -1.6
PTPRM-213ENST00000580949 P2RY1P47900 373 aa5.03□□□□□ -1.6
PTPRM-213ENST00000580949 PDLIM4P50479 330 aa5.03□□□□□ -1.6
PTPRM-213ENST00000580949 ZNF137PP52743 207 aa5.03□□□□□ -1.6
PTPRM-213ENST00000580949 GNB2P62879 340 aa5.03□□□□□ -1.6
PTPRM-213ENST00000580949 AARDQ4LEZ3 155 aa5.03□□□□□ -1.6
PTPRM-213ENST00000580949 GPR157Q5UAW9 335 aa5.03□□□□□ -1.6
PTPRM-213ENST00000580949 ZNF767PQ75MW2 155 aa5.03□□□□□ -1.6
PTPRM-213ENST00000580949 SSX9Q7RTT3 188 aa5.03□□□□□ -1.6
PTPRM-213ENST00000580949 H2BFWTQ7Z2G1 175 aa5.03□□□□□ -1.6
PTPRM-213ENST00000580949 SLC51BQ86UW2 128 aa5.03□□□□□ -1.6
PTPRM-213ENST00000580949 HAPLN4Q86UW8 402 aa5.03□□□□□ -1.6
PTPRM-213ENST00000580949 PNKDQ8N490 385 aa5.03□□□□□ -1.6
PTPRM-213ENST00000580949 OR10X1Q8NGY0 326 aa5.03□□□□□ -1.6
PTPRM-213ENST00000580949 OR9G1Q8NH87 305 aa5.03□□□□□ -1.6
PTPRM-213ENST00000580949 CLDND2Q8NHS1 167 aa5.03□□□□□ -1.6
PTPRM-213ENST00000580949 RNASE11Q8TAA1 199 aaKnown RBP5.03□□□□□ -1.6
PTPRM-213ENST00000580949 C10orf105Q8TEF2 133 aa5.03□□□□□ -1.6
PTPRM-213ENST00000580949 TNFRSF14Q92956 283 aa5.03□□□□□ -1.6
PTPRM-213ENST00000580949 ADTRPQ96IZ2 230 aa5.03□□□□□ -1.6
PTPRM-213ENST00000580949 RITA1Q96K30 269 aa5.03□□□□□ -1.6
PTPRM-213ENST00000580949 NABP2Q9BQ15 211 aa5.03□□□□□ -1.6
PTPRM-213ENST00000580949 RBKSQ9H477 322 aa5.03□□□□□ -1.6
PTPRM-213ENST00000580949 MMP26Q9NRE1 261 aa5.03□□□□□ -1.6
PTPRM-213ENST00000580949 CTNNBIP1Q9NSA3 81 aaPredicted RBP5.03□□□□□ -1.6
PTPRM-213ENST00000580949 ZFP57Q9NU63 452 aa5.03□□□□□ -1.6
PTPRM-213ENST00000580949 ONECUT1Q9UBC0 465 aa5.03□□□□□ -1.6
PTPRM-213ENST00000580949 PAIP2BQ9ULR5 123 aaKnown RBP5.03□□□□□ -1.6
PTPRM-213ENST00000580949 PRELID3BQ9Y3B1 194 aa5.03□□□□□ -1.6
PTPRM-213ENST00000580949 PTPN13Q12923 2485 aa5.02□□□□□ -1.61
PTPRM-213ENST00000580949 FBN2P35556 2912 aa5.02□□□□□ -1.61
PTPRM-213ENST00000580949 ARHGAP32A7KAX9 2087 aa5.02□□□□□ -1.61
PTPRM-213ENST00000580949 PIGBOS1A0A0B4J2F0 54 aa5.02□□□□□ -1.61
PTPRM-213ENST00000580949 IGHV4-61A0A0C4DH41 118 aa5.02□□□□□ -1.61
PTPRM-213ENST00000580949 RPS10-NUDT3A0A1W2PQS6 291 aa5.02□□□□□ -1.61
PTPRM-213ENST00000580949 FAM157AC9JC47 383 aa5.02□□□□□ -1.61
PTPRM-213ENST00000580949 BUB1B-PAK6H3BSN5 160 aa5.02□□□□□ -1.61
PTPRM-213ENST00000580949 M0R1W7 72 aa5.02□□□□□ -1.61
PTPRM-213ENST00000580949 WRBO00258 174 aa5.02□□□□□ -1.61
PTPRM-213ENST00000580949 TOR1AO14656 332 aa5.02□□□□□ -1.61
PTPRM-213ENST00000580949 SYNGR2O43760 224 aa5.02□□□□□ -1.61
PTPRM-213ENST00000580949 ATG12O94817 140 aa5.02□□□□□ -1.61
PTPRM-213ENST00000580949 SPDEFO95238 335 aa5.02□□□□□ -1.61
PTPRM-213ENST00000580949 FSHBP01225 129 aa5.02□□□□□ -1.61
PTPRM-213ENST00000580949 IFNA7P01567 189 aa5.02□□□□□ -1.61
PTPRM-213ENST00000580949 IAPPP10997 89 aa5.02□□□□□ -1.61
PTPRM-213ENST00000580949 MYOD1P15172 320 aa5.02□□□□□ -1.61
PTPRM-213ENST00000580949 PAX1P15863 534 aa5.02□□□□□ -1.61
PTPRM-213ENST00000580949 PRTN3P24158 256 aa5.02□□□□□ -1.61
PTPRM-213ENST00000580949 NUP62P37198 522 aaPredicted RBP5.02□□□□□ -1.61
PTPRM-213ENST00000580949 HTR2BP41595 481 aa5.02□□□□□ -1.61
PTPRM-213ENST00000580949 PRRX1P54821 245 aa5.02□□□□□ -1.61
PTPRM-213ENST00000580949 ATP5J2P56134 94 aa5.02□□□□□ -1.61
PTPRM-213ENST00000580949 LCN2P80188 198 aa5.02□□□□□ -1.61
PTPRM-213ENST00000580949 EWSR1Q01844 656 aaKnown RBP eCLIP5.02□□□□□ -1.61
PTPRM-213ENST00000580949 TNFRSF9Q07011 255 aa5.02□□□□□ -1.61
PTPRM-213ENST00000580949 ARL16Q0P5N6 197 aa5.02□□□□□ -1.61
PTPRM-213ENST00000580949 KLRD1Q13241 179 aa5.02□□□□□ -1.61
PTPRM-213ENST00000580949 POU2AF1Q16633 256 aa5.02□□□□□ -1.61
PTPRM-213ENST00000580949 HLA-DRB5Q30154 266 aa5.02□□□□□ -1.61
PTPRM-213ENST00000580949 BEAN1Q3B7T3 259 aa5.02□□□□□ -1.61
PTPRM-213ENST00000580949 SPINK9Q5DT21 86 aa5.02□□□□□ -1.61
PTPRM-213ENST00000580949 RPL7L1Q6DKI1 246 aaKnown RBP5.02□□□□□ -1.61
PTPRM-213ENST00000580949 ALKAL2Q6UX46 152 aa5.02□□□□□ -1.61
PTPRM-213ENST00000580949 C1orf122Q6ZSJ8 110 aa5.02□□□□□ -1.61
PTPRM-213ENST00000580949 TMEM252Q8N6L7 170 aa5.02□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms