RNA–Protein interactions for RNA: ENST00000580419.5

SMARCE1-216, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 1 (best) BASIC

Gene SMARCE1, Length 1,228 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-216ENST00000580419 NUDCD2Q8WVJ2 157 aa11.03□□□□□ -0.64
SMARCE1-216ENST00000580419 GIMAP1Q8WWP7 306 aa11.03□□□□□ -0.64
SMARCE1-216ENST00000580419 ACOT12Q8WYK0 555 aa11.03□□□□□ -0.64
SMARCE1-216ENST00000580419 SLC25A38Q96DW6 304 aa11.03□□□□□ -0.64
SMARCE1-216ENST00000580419 DIABLOQ9NR28 239 aa11.03□□□□□ -0.64
SMARCE1-216ENST00000580419 BET1LQ9NYM9 111 aa11.03□□□□□ -0.64
SMARCE1-216ENST00000580419 SPATA2Q9UM82 520 aa11.03□□□□□ -0.64
SMARCE1-216ENST00000580419 ANKRD34BA5PLL1 514 aa11.02□□□□□ -0.65
SMARCE1-216ENST00000580419 TEX22C9J3V5 150 aa11.02□□□□□ -0.65
SMARCE1-216ENST00000580419 BMPR1BO00238 502 aa11.02□□□□□ -0.65
SMARCE1-216ENST00000580419 RBMXL2O75526 392 aaKnown RBP11.02□□□□□ -0.65
SMARCE1-216ENST00000580419 HIST1H1BP16401 226 aaKnown RBP11.02□□□□□ -0.65
SMARCE1-216ENST00000580419 BRWD1-AS2P59051 145 aa11.02□□□□□ -0.65
SMARCE1-216ENST00000580419 ZNF45Q02386 682 aa11.02□□□□□ -0.65
SMARCE1-216ENST00000580419 CASC10Q5T4H9 136 aa11.02□□□□□ -0.65
SMARCE1-216ENST00000580419 THOC7Q6I9Y2 204 aaKnown RBP11.02□□□□□ -0.65
SMARCE1-216ENST00000580419 GTSCR1Q86UQ5 136 aa11.02□□□□□ -0.65
SMARCE1-216ENST00000580419 GPHB5Q86YW7 130 aa11.02□□□□□ -0.65
SMARCE1-216ENST00000580419 DCUN1D5Q9BTE7 237 aa11.02□□□□□ -0.65
SMARCE1-216ENST00000580419 RSRP1Q9BUV0 290 aa11.02□□□□□ -0.65
SMARCE1-216ENST00000580419 TECRQ9NZ01 308 aaKnown RBP11.02□□□□□ -0.65
SMARCE1-216ENST00000580419 DMRT1Q9Y5R6 373 aa11.02□□□□□ -0.65
SMARCE1-216ENST00000580419 TENM2Q9NT68 2774 aa11.01□□□□□ -0.65
SMARCE1-216ENST00000580419 TRBV12-3P01733 135 aa11.01□□□□□ -0.65
SMARCE1-216ENST00000580419 IL6RP08887 468 aaPredicted RBP11.01□□□□□ -0.65
SMARCE1-216ENST00000580419 RPL27AP46776 148 aaKnown RBP11.01□□□□□ -0.65
SMARCE1-216ENST00000580419 TAS2R31P59538 309 aa11.01□□□□□ -0.65
SMARCE1-216ENST00000580419 RPL8P62917 257 aaKnown RBP11.01□□□□□ -0.65
SMARCE1-216ENST00000580419 EXOSC2Q13868 293 aaKnown RBP11.01□□□□□ -0.65
SMARCE1-216ENST00000580419 TCTEX1D2Q8WW35 142 aa11.01□□□□□ -0.65
SMARCE1-216ENST00000580419 FYTTD1Q96QD9 318 aaKnown RBP11.01□□□□□ -0.65
SMARCE1-216ENST00000580419 ATP6V0BQ99437 205 aa11.01□□□□□ -0.65
SMARCE1-216ENST00000580419 AUNIPQ9H7T9 357 aa11.01□□□□□ -0.65
SMARCE1-216ENST00000580419 ZC4H2Q9NQZ6 224 aa11.01□□□□□ -0.65
SMARCE1-216ENST00000580419 XRCC3O43542 346 aa11□□□□□ -0.65
SMARCE1-216ENST00000580419 GGCTO75223 188 aaKnown RBP11□□□□□ -0.65
SMARCE1-216ENST00000580419 PPYP01298 95 aa11□□□□□ -0.65
SMARCE1-216ENST00000580419 CTRB1P17538 263 aa11□□□□□ -0.65
SMARCE1-216ENST00000580419 PSMB6P28072 239 aa11□□□□□ -0.65
SMARCE1-216ENST00000580419 CATR1Q13166 79 aa11□□□□□ -0.65
SMARCE1-216ENST00000580419 C15orf32Q32M92 178 aa11□□□□□ -0.65
SMARCE1-216ENST00000580419 CTRB2Q6GPI1 263 aa11□□□□□ -0.65
SMARCE1-216ENST00000580419 DHRS11Q6UWP2 260 aa11□□□□□ -0.65
SMARCE1-216ENST00000580419 OR5AP2Q8NGF4 316 aa11□□□□□ -0.65
SMARCE1-216ENST00000580419 SPATA25Q9BR10 227 aa11□□□□□ -0.65
SMARCE1-216ENST00000580419 EDA2RQ9HAV5 297 aa11□□□□□ -0.65
SMARCE1-216ENST00000580419 PLEKHA2Q9HB19 425 aa11□□□□□ -0.65
SMARCE1-216ENST00000580419 ADAM30Q9UKF2 790 aa11□□□□□ -0.65
SMARCE1-216ENST00000580419 ANAPC10Q9UM13 185 aa11□□□□□ -0.65
SMARCE1-216ENST00000580419 LYSTQ99698 3801 aa10.99□□□□□ -0.65
SMARCE1-216ENST00000580419 TRAV18A0A075B6X5 111 aa10.99□□□□□ -0.65
SMARCE1-216ENST00000580419 A8MWP6 167 aa10.99□□□□□ -0.65
SMARCE1-216ENST00000580419 HPRT1P00492 218 aa10.99□□□□□ -0.65
SMARCE1-216ENST00000580419 HLA-GP17693 338 aa10.99□□□□□ -0.65
SMARCE1-216ENST00000580419 FCGR2CP31995 323 aa10.99□□□□□ -0.65
SMARCE1-216ENST00000580419 LINC00322Q6ZN03 302 aaPredicted RBP10.99□□□□□ -0.65
SMARCE1-216ENST00000580419 HSD17B13Q7Z5P4 300 aaPredicted RBP10.99□□□□□ -0.65
SMARCE1-216ENST00000580419 OR13F1Q8NGS4 319 aa10.99□□□□□ -0.65
SMARCE1-216ENST00000580419 CXorf58Q96LI9 332 aa10.99□□□□□ -0.65
SMARCE1-216ENST00000580419 FANCD2OSQ96PS1 177 aa10.99□□□□□ -0.65
SMARCE1-216ENST00000580419 SACSQ9NZJ4 4579 aa10.98□□□□□ -0.65
SMARCE1-216ENST00000580419 TRBV7-1A0A0A6YYK4 115 aa10.98□□□□□ -0.65
SMARCE1-216ENST00000580419 SMIM30A4D0T7 59 aa10.98□□□□□ -0.65
SMARCE1-216ENST00000580419 LYL1P12980 280 aa10.98□□□□□ -0.65
SMARCE1-216ENST00000580419 NQO2P16083 231 aa10.98□□□□□ -0.65
SMARCE1-216ENST00000580419 NAT1P18440 290 aa10.98□□□□□ -0.65
SMARCE1-216ENST00000580419 C10orf55Q5SWW7 151 aa10.98□□□□□ -0.65
SMARCE1-216ENST00000580419 OR5H6Q8NGV6 325 aa10.98□□□□□ -0.65
SMARCE1-216ENST00000580419 S100A16Q96FQ6 103 aaKnown RBP10.98□□□□□ -0.65
SMARCE1-216ENST00000580419 FAM212BQ9NTI7 297 aaPredicted RBP10.98□□□□□ -0.65
SMARCE1-216ENST00000580419 TAS2R8Q9NYW2 309 aa10.98□□□□□ -0.65
SMARCE1-216ENST00000580419 COMMD9Q9P000 198 aa10.98□□□□□ -0.65
SMARCE1-216ENST00000580419 IGLV11-55A0A075B6I3 123 aa10.97□□□□□ -0.65
SMARCE1-216ENST00000580419 A0A1B0GW64 132 aa10.97□□□□□ -0.65
SMARCE1-216ENST00000580419 DPPA5A6NC42 116 aa10.97□□□□□ -0.65
SMARCE1-216ENST00000580419 MXD1Q05195 221 aa10.97□□□□□ -0.65
SMARCE1-216ENST00000580419 HAGHQ16775 308 aa10.97□□□□□ -0.65
SMARCE1-216ENST00000580419 DEFB114Q30KQ6 69 aa10.97□□□□□ -0.65
SMARCE1-216ENST00000580419 FAM106AQ4KMX7 169 aa10.97□□□□□ -0.65
SMARCE1-216ENST00000580419 IDNKQ5T6J7 187 aa10.97□□□□□ -0.65
SMARCE1-216ENST00000580419 OR4A47Q6IF82 309 aa10.97□□□□□ -0.65
SMARCE1-216ENST00000580419 ADAMTSL5Q6ZMM2 481 aa10.97□□□□□ -0.65
SMARCE1-216ENST00000580419 VKORC1L1Q8N0U8 176 aa10.97□□□□□ -0.65
SMARCE1-216ENST00000580419 SPAG16Q8N0X2 631 aa10.97□□□□□ -0.65
SMARCE1-216ENST00000580419 MARC2Q969Z3 335 aa10.97□□□□□ -0.65
SMARCE1-216ENST00000580419 ISOC1Q96CN7 298 aa10.97□□□□□ -0.65
SMARCE1-216ENST00000580419 CMTM3Q96MX0 182 aa10.97□□□□□ -0.65
SMARCE1-216ENST00000580419 SLC2A8Q9NY64 477 aa10.97□□□□□ -0.65
SMARCE1-216ENST00000580419 THYN1Q9P016 225 aa10.97□□□□□ -0.65
SMARCE1-216ENST00000580419 FBXL7Q9UJT9 491 aa10.97□□□□□ -0.65
SMARCE1-216ENST00000580419 LOC100506127A0A0U1RQW1 187 aa10.96□□□□□ -0.65
SMARCE1-216ENST00000580419 C2orf70A6NJV1 201 aa10.96□□□□□ -0.65
SMARCE1-216ENST00000580419 E7EUB6 86 aa10.96□□□□□ -0.65
SMARCE1-216ENST00000580419 CYB5BO43169 146 aa10.96□□□□□ -0.65
SMARCE1-216ENST00000580419 OR2J3O76001 311 aa10.96□□□□□ -0.65
SMARCE1-216ENST00000580419 IFNA6P05013 189 aa10.96□□□□□ -0.65
SMARCE1-216ENST00000580419 APELAP0DMC3 54 aa10.96□□□□□ -0.65
SMARCE1-216ENST00000580419 ELLP55199 621 aaPredicted RBP10.96□□□□□ -0.65
SMARCE1-216ENST00000580419 OR2B8PP59922 312 aa10.96□□□□□ -0.65
SMARCE1-216ENST00000580419 UBE2NLQ5JXB2 153 aa10.96□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 83.5 ms