RNA–Protein interactions for RNA: ENST00000579081.5

NF1-219, Transcript of neurofibromin 1, humanhuman

TSL 1 (best)

Gene NF1, Length 8,788 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NF1-219ENST00000579081 KLF2Q9Y5W3 355 aaPredicted RBP4.43□□□□□ -1.7
NF1-219ENST00000579081 F11RQ9Y624 299 aaKnown RBP4.43□□□□□ -1.7
NF1-219ENST00000579081 MOSPD3O75425 235 aa4.43□□□□□ -1.7
NF1-219ENST00000579081 ZFPL1O95159 310 aa4.43□□□□□ -1.7
NF1-219ENST00000579081 TMEM50BP56557 158 aa4.43□□□□□ -1.7
NF1-219ENST00000579081 TMEM95Q3KNT9 176 aa4.43□□□□□ -1.7
NF1-219ENST00000579081 KRTCAP3Q53RY4 240 aa4.43□□□□□ -1.7
NF1-219ENST00000579081 C19orf48Q6RUI8 117 aa4.43□□□□□ -1.7
NF1-219ENST00000579081 UBE2DNLQ8IWF7 75 aa4.43□□□□□ -1.7
NF1-219ENST00000579081 LRTM2Q8N967 370 aa4.43□□□□□ -1.7
NF1-219ENST00000579081 OR1K1Q8NGR3 316 aa4.43□□□□□ -1.7
NF1-219ENST00000579081 PGLYRP3Q96LB9 341 aa4.43□□□□□ -1.7
NF1-219ENST00000579081 C20orf144Q9BQM9 153 aa4.43□□□□□ -1.7
NF1-219ENST00000579081 ZNF430Q9H8G1 570 aaPredicted RBP4.43□□□□□ -1.7
NF1-219ENST00000579081 COL24A1Q17RW2 1714 aa4.43□□□□□ -1.7
NF1-219ENST00000579081 AHDC1Q5TGY3 1603 aaPredicted RBP4.43□□□□□ -1.7
NF1-219ENST00000579081 TRIP12Q14669 1992 aaPredicted RBP4.43□□□□□ -1.7
NF1-219ENST00000579081 TNRC6AQ8NDV7 1962 aaKnown RBP4.42□□□□□ -1.7
NF1-219ENST00000579081 TRBV6-7A0A0A0MS04 114 aa4.42□□□□□ -1.7
NF1-219ENST00000579081 CENPVL1A0A0U1RR11 272 aa4.42□□□□□ -1.7
NF1-219ENST00000579081 C7orf77A4D0Y5 90 aa4.42□□□□□ -1.7
NF1-219ENST00000579081 TMEM229AB2RXF0 380 aa4.42□□□□□ -1.7
NF1-219ENST00000579081 LEPROTL1O95214 131 aa4.42□□□□□ -1.7
NF1-219ENST00000579081 HIST1H1AQ02539 215 aaPredicted RBP4.42□□□□□ -1.7
NF1-219ENST00000579081 RNF133Q8WVZ7 376 aa4.42□□□□□ -1.7
NF1-219ENST00000579081 RASL10BQ96S79 203 aa4.42□□□□□ -1.7
NF1-219ENST00000579081 VGLL1Q99990 258 aa4.42□□□□□ -1.7
NF1-219ENST00000579081 HOXA3O43365 443 aaPredicted RBP4.42□□□□□ -1.7
NF1-219ENST00000579081 MALP21145 153 aa4.42□□□□□ -1.7
NF1-219ENST00000579081 OR10J3Q5JRS4 329 aa4.42□□□□□ -1.7
NF1-219ENST00000579081 TMEM170BQ5T4T1 132 aa4.42□□□□□ -1.7
NF1-219ENST00000579081 ITLN2Q8WWU7 325 aaPredicted RBP4.42□□□□□ -1.7
NF1-219ENST00000579081 SRSF12Q8WXF0 261 aaKnown RBP4.42□□□□□ -1.7
NF1-219ENST00000579081 SMCHD1A6NHR9 2005 aa4.42□□□□□ -1.7
NF1-219ENST00000579081 A0A1W2PQD3 144 aa4.42□□□□□ -1.7
NF1-219ENST00000579081 MGAT2Q10469 447 aa4.42□□□□□ -1.7
NF1-219ENST00000579081 SNAI3Q3KNW1 292 aa4.42□□□□□ -1.7
NF1-219ENST00000579081 RNF138Q8WVD3 245 aa4.42□□□□□ -1.7
NF1-219ENST00000579081 DNASE2BQ8WZ79 361 aa4.42□□□□□ -1.7
NF1-219ENST00000579081 SIGLEC1Q9BZZ2 1709 aa4.42□□□□□ -1.7
NF1-219ENST00000579081 LIPT2A6NK58 231 aa4.42□□□□□ -1.7
NF1-219ENST00000579081 LYRM9A8MSI8 78 aa4.42□□□□□ -1.7
NF1-219ENST00000579081 SIVA1O15304 175 aa4.42□□□□□ -1.7
NF1-219ENST00000579081 FGF5P12034 268 aa4.42□□□□□ -1.7
NF1-219ENST00000579081 CCL4P13236 92 aa4.42□□□□□ -1.7
NF1-219ENST00000579081 ZNF506Q5JVG8 444 aa4.42□□□□□ -1.7
NF1-219ENST00000579081 HSPB9Q9BQS6 159 aa4.42□□□□□ -1.7
NF1-219ENST00000579081 OPN3Q9H1Y3 402 aaPredicted RBP4.42□□□□□ -1.7
NF1-219ENST00000579081 PNLIPP16233 465 aa4.42□□□□□ -1.7
NF1-219ENST00000579081 GPR183P32249 361 aa4.42□□□□□ -1.7
NF1-219ENST00000579081 GLIPR1P48060 266 aa4.42□□□□□ -1.7
NF1-219ENST00000579081 RND2P52198 227 aa4.42□□□□□ -1.7
NF1-219ENST00000579081 RND3P61587 244 aa4.42□□□□□ -1.7
NF1-219ENST00000579081 GAB4Q2WGN9 574 aa4.42□□□□□ -1.7
NF1-219ENST00000579081 Q6ZNB5 142 aa4.42□□□□□ -1.7
NF1-219ENST00000579081 TMEM160Q9NX00 188 aa4.42□□□□□ -1.7
NF1-219ENST00000579081 POLR2AP24928 1970 aaKnown RBP4.42□□□□□ -1.7
NF1-219ENST00000579081 TRAV21A0A0B4J279 112 aa4.42□□□□□ -1.7
NF1-219ENST00000579081 DXOO77932 396 aaKnown RBP4.42□□□□□ -1.7
NF1-219ENST00000579081 PEX11BO96011 259 aa4.42□□□□□ -1.7
NF1-219ENST00000579081 ISG15P05161 165 aa4.42□□□□□ -1.7
NF1-219ENST00000579081 ZNF688P0C7X2 276 aa4.42□□□□□ -1.7
NF1-219ENST00000579081 XAF1Q6GPH4 301 aa4.42□□□□□ -1.7
NF1-219ENST00000579081 SPRED2Q7Z698 418 aa4.42□□□□□ -1.7
NF1-219ENST00000579081 ZNF436-AS1Q8NC38 126 aaPredicted RBP4.42□□□□□ -1.7
NF1-219ENST00000579081 C8orf46Q8TAG6 207 aa4.42□□□□□ -1.7
NF1-219ENST00000579081 FGF11Q92914 225 aa4.42□□□□□ -1.7
NF1-219ENST00000579081 DUX3Q96PT4 197 aa4.42□□□□□ -1.7
NF1-219ENST00000579081 CCL19Q99731 98 aa4.42□□□□□ -1.7
NF1-219ENST00000579081 AGMATQ9BSE5 352 aa4.42□□□□□ -1.7
NF1-219ENST00000579081 IDI2-AS1Q9NZ38 188 aa4.42□□□□□ -1.7
NF1-219ENST00000579081 C1QL1O75973 258 aa4.42□□□□□ -1.7
NF1-219ENST00000579081 AMY1AP04745 511 aa4.42□□□□□ -1.7
NF1-219ENST00000579081 VSIG10L2P0DP72 767 aa4.42□□□□□ -1.7
NF1-219ENST00000579081 MBNL2Q5VZF2 373 aaKnown RBP4.42□□□□□ -1.7
NF1-219ENST00000579081 LYZL2Q7Z4W2 148 aa4.42□□□□□ -1.7
NF1-219ENST00000579081 HEATR1Q9H583 2144 aaKnown RBP4.41□□□□□ -1.7
NF1-219ENST00000579081 NHSL1Q5SYE7 1610 aa4.41□□□□□ -1.7
NF1-219ENST00000579081 LOC105371242A0A075B767 164 aa4.41□□□□□ -1.7
NF1-219ENST00000579081 IGHV3OR16-10A0A075B7F0 116 aa4.41□□□□□ -1.7
NF1-219ENST00000579081 PPIAL4CA0A0B4J2A2 164 aa4.41□□□□□ -1.7
NF1-219ENST00000579081 PPIAL4GP0DN37 164 aa4.41□□□□□ -1.7
NF1-219ENST00000579081 MRPL23Q16540 153 aaKnown RBP4.41□□□□□ -1.7
NF1-219ENST00000579081 PMS2CLQ68D20 193 aa4.41□□□□□ -1.7
NF1-219ENST00000579081 LHX8Q68G74 356 aa4.41□□□□□ -1.7
NF1-219ENST00000579081 FAM90A1Q86YD7 464 aa4.41□□□□□ -1.7
NF1-219ENST00000579081 HIST1H2BAQ96A08 127 aa4.41□□□□□ -1.7
NF1-219ENST00000579081 TMEM106BQ9NUM4 274 aa4.41□□□□□ -1.7
NF1-219ENST00000579081 OR11H12B2RN74 326 aa4.41□□□□□ -1.7
NF1-219ENST00000579081 IL9P15248 144 aa4.41□□□□□ -1.7
NF1-219ENST00000579081 EIF4EBP2Q13542 120 aaPredicted RBP4.41□□□□□ -1.7
NF1-219ENST00000579081 MESTQ5EB52 335 aa4.41□□□□□ -1.7
NF1-219ENST00000579081 OR11H1Q8NG94 326 aa4.41□□□□□ -1.7
NF1-219ENST00000579081 OR11H2Q8NH07 326 aa4.41□□□□□ -1.7
NF1-219ENST00000579081 ZNF418Q8TF45 676 aaPredicted RBP4.41□□□□□ -1.7
NF1-219ENST00000579081 ITLN1Q8WWA0 313 aa4.41□□□□□ -1.7
NF1-219ENST00000579081 IL36RNQ9UBH0 155 aa4.41□□□□□ -1.7
NF1-219ENST00000579081 TRBV20OR9-2A0A075B6H5 130 aa4.41□□□□□ -1.7
NF1-219ENST00000579081 FOXH1O75593 365 aa4.41□□□□□ -1.7
NF1-219ENST00000579081 RPL8P62917 257 aaKnown RBP4.41□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms