RNA–Protein interactions for RNA: ENST00000578904.1

CSNK1D-209, Transcript of casein kinase 1 delta, humanhuman

TSL 3

Gene CSNK1D, Length 1,269 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-209ENST00000578904 CRLF1O75462 422 aa11.21□□□□□ -0.61
CSNK1D-209ENST00000578904 SPDEFO95238 335 aa11.21□□□□□ -0.61
CSNK1D-209ENST00000578904 SCGB1D2O95969 90 aa11.21□□□□□ -0.61
CSNK1D-209ENST00000578904 MOSP00540 346 aa11.21□□□□□ -0.61
CSNK1D-209ENST00000578904 IGKV1-5P01602 117 aa11.21□□□□□ -0.61
CSNK1D-209ENST00000578904 HES1Q14469 280 aa11.21□□□□□ -0.61
CSNK1D-209ENST00000578904 TEX45Q8NA69 505 aa11.21□□□□□ -0.61
CSNK1D-209ENST00000578904 C22orf15Q8WYQ4 148 aa11.21□□□□□ -0.61
CSNK1D-209ENST00000578904 TMEM140Q9NV12 185 aa11.21□□□□□ -0.61
CSNK1D-209ENST00000578904 PRNDQ9UKY0 176 aa11.21□□□□□ -0.61
CSNK1D-209ENST00000578904 MPTX1A8MV57 137 aa11.2□□□□□ -0.62
CSNK1D-209ENST00000578904 VENTXO95231 258 aa11.2□□□□□ -0.62
CSNK1D-209ENST00000578904 IGKV1-16P04430 117 aa11.2□□□□□ -0.62
CSNK1D-209ENST00000578904 FGF2P09038 288 aa11.2□□□□□ -0.62
CSNK1D-209ENST00000578904 C4BPBP20851 252 aa11.2□□□□□ -0.62
CSNK1D-209ENST00000578904 DYNLT3P51808 116 aa11.2□□□□□ -0.62
CSNK1D-209ENST00000578904 S100A10P60903 97 aa11.2□□□□□ -0.62
CSNK1D-209ENST00000578904 UBE2KP61086 200 aa11.2□□□□□ -0.62
CSNK1D-209ENST00000578904 AANATQ16613 207 aa11.2□□□□□ -0.62
CSNK1D-209ENST00000578904 C9orf139Q6ZV77 190 aa11.2□□□□□ -0.62
CSNK1D-209ENST00000578904 SSX9Q7RTT3 188 aa11.2□□□□□ -0.62
CSNK1D-209ENST00000578904 NOXA1Q86UR1 476 aa11.2□□□□□ -0.62
CSNK1D-209ENST00000578904 PIP4P2Q8N4L2 257 aa11.2□□□□□ -0.62
CSNK1D-209ENST00000578904 OR8H1Q8NGG4 311 aa11.2□□□□□ -0.62
CSNK1D-209ENST00000578904 OR4D5Q8NGN0 318 aa11.2□□□□□ -0.62
CSNK1D-209ENST00000578904 MEGF9Q9H1U4 602 aa11.2□□□□□ -0.62
CSNK1D-209ENST00000578904 POMT1Q9Y6A1 747 aa11.2□□□□□ -0.62
CSNK1D-209ENST00000578904 FN1P02751 2386 aaKnown RBP11.2□□□□□ -0.62
CSNK1D-209ENST00000578904 FBN3Q75N90 2809 aa11.2□□□□□ -0.62
CSNK1D-209ENST00000578904 IGHV3-72A0A0B4J1Y9 119 aa11.19□□□□□ -0.62
CSNK1D-209ENST00000578904 A0A0U1RQK1 487 aa11.19□□□□□ -0.62
CSNK1D-209ENST00000578904 L7N2F9 121 aa11.19□□□□□ -0.62
CSNK1D-209ENST00000578904 ACTL6BO94805 426 aa11.19□□□□□ -0.62
CSNK1D-209ENST00000578904 MPC2O95563 127 aa11.19□□□□□ -0.62
CSNK1D-209ENST00000578904 IGKV1D-33P01593 117 aa11.19□□□□□ -0.62
CSNK1D-209ENST00000578904 IGKV1-33P01594 117 aa11.19□□□□□ -0.62
CSNK1D-209ENST00000578904 FAM157CP0CG43 387 aa11.19□□□□□ -0.62
CSNK1D-209ENST00000578904 VAMP2P63027 116 aa11.19□□□□□ -0.62
CSNK1D-209ENST00000578904 LRRC37A5PQ49AS3 106 aa11.19□□□□□ -0.62
CSNK1D-209ENST00000578904 OR4A47Q6IF82 309 aa11.19□□□□□ -0.62
CSNK1D-209ENST00000578904 C11orf87Q6NUJ2 197 aa11.19□□□□□ -0.62
CSNK1D-209ENST00000578904 ZNF429Q86V71 674 aa11.19□□□□□ -0.62
CSNK1D-209ENST00000578904 FOXRED2Q8IWF2 684 aa11.19□□□□□ -0.62
CSNK1D-209ENST00000578904 MRPL41Q8IXM3 137 aaKnown RBP11.19□□□□□ -0.62
CSNK1D-209ENST00000578904 BCL6BQ8N143 479 aaPredicted RBP11.19□□□□□ -0.62
CSNK1D-209ENST00000578904 CFHR4Q92496 578 aa11.19□□□□□ -0.62
CSNK1D-209ENST00000578904 CIB3Q96Q77 187 aaPredicted RBP11.19□□□□□ -0.62
CSNK1D-209ENST00000578904 LSM5Q9Y4Y9 91 aaKnown RBP11.19□□□□□ -0.62
CSNK1D-209ENST00000578904 E5RGE8 158 aa11.18□□□□□ -0.62
CSNK1D-209ENST00000578904 UPK2O00526 184 aa11.18□□□□□ -0.62
CSNK1D-209ENST00000578904 GPR137BO60478 399 aa11.18□□□□□ -0.62
CSNK1D-209ENST00000578904 PITX3O75364 302 aa11.18□□□□□ -0.62
CSNK1D-209ENST00000578904 KBTBD11O94819 623 aa11.18□□□□□ -0.62
CSNK1D-209ENST00000578904 IFNA17P01571 189 aa11.18□□□□□ -0.62
CSNK1D-209ENST00000578904 SNRNP70P08621 437 aaKnown RBP11.18□□□□□ -0.62
CSNK1D-209ENST00000578904 P0C879 139 aa11.18□□□□□ -0.62
CSNK1D-209ENST00000578904 SAA1P0DJI8 122 aaPredicted RBP11.18□□□□□ -0.62
CSNK1D-209ENST00000578904 SLC25A4P12235 298 aa11.18□□□□□ -0.62
CSNK1D-209ENST00000578904 TMEM11P17152 192 aa11.18□□□□□ -0.62
CSNK1D-209ENST00000578904 MAS1LP35410 378 aa11.18□□□□□ -0.62
CSNK1D-209ENST00000578904 EIF2B2P49770 351 aaKnown RBP11.18□□□□□ -0.62
CSNK1D-209ENST00000578904 ID3Q02535 119 aa11.18□□□□□ -0.62
CSNK1D-209ENST00000578904 IL15RAQ13261 267 aa11.18□□□□□ -0.62
CSNK1D-209ENST00000578904 RAB32Q13637 225 aa11.18□□□□□ -0.62
CSNK1D-209ENST00000578904 EBI3Q14213 229 aa11.18□□□□□ -0.62
CSNK1D-209ENST00000578904 PLGLAQ15195 96 aa11.18□□□□□ -0.62
CSNK1D-209ENST00000578904 LDLRAD2Q5SZI1 272 aa11.18□□□□□ -0.62
CSNK1D-209ENST00000578904 PRSS54Q6PEW0 395 aa11.18□□□□□ -0.62
CSNK1D-209ENST00000578904 MMD2Q8IY49 270 aa11.18□□□□□ -0.62
CSNK1D-209ENST00000578904 PUSL1Q8N0Z8 303 aaKnown RBP11.18□□□□□ -0.62
CSNK1D-209ENST00000578904 INO80EQ8NBZ0 244 aaPredicted RBP11.18□□□□□ -0.62
CSNK1D-209ENST00000578904 OR52E5Q8NH55 327 aa11.18□□□□□ -0.62
CSNK1D-209ENST00000578904 RAB40CQ96S21 281 aa11.18□□□□□ -0.62
CSNK1D-209ENST00000578904 ENY2Q9NPA8 101 aa11.18□□□□□ -0.62
CSNK1D-209ENST00000578904 PITPNC1Q9UKF7 332 aa11.18□□□□□ -0.62
CSNK1D-209ENST00000578904 ZNF257Q9Y2Q1 563 aa11.18□□□□□ -0.62
CSNK1D-209ENST00000578904 NSG2Q9Y328 171 aa11.18□□□□□ -0.62
CSNK1D-209ENST00000578904 SOX21Q9Y651 276 aaPredicted RBP11.18□□□□□ -0.62
CSNK1D-209ENST00000578904 NIPBLQ6KC79 2804 aaeCLIP11.17□□□□□ -0.62
CSNK1D-209ENST00000578904 FXYD6-FXYD2A0A087WZ82 144 aa11.17□□□□□ -0.62
CSNK1D-209ENST00000578904 A0A0G2JRQ6 117 aa11.17□□□□□ -0.62
CSNK1D-209ENST00000578904 MDFIC2A0A1B0GVS7 189 aa11.17□□□□□ -0.62
CSNK1D-209ENST00000578904 BTBD17A6NE02 478 aa11.17□□□□□ -0.62
CSNK1D-209ENST00000578904 C15orf61A6NNL5 157 aa11.17□□□□□ -0.62
CSNK1D-209ENST00000578904 HMSDA8MTL9 139 aa11.17□□□□□ -0.62
CSNK1D-209ENST00000578904 NBR2O15453 112 aa11.17□□□□□ -0.62
CSNK1D-209ENST00000578904 DEDDO75618 318 aa11.17□□□□□ -0.62
CSNK1D-209ENST00000578904 MBPP02686 304 aaPredicted RBP11.17□□□□□ -0.62
CSNK1D-209ENST00000578904 SPCS3P61009 180 aa11.17□□□□□ -0.62
CSNK1D-209ENST00000578904 RPL23AP62750 156 aaKnown RBP11.17□□□□□ -0.62
CSNK1D-209ENST00000578904 RPL8P62917 257 aaKnown RBP11.17□□□□□ -0.62
CSNK1D-209ENST00000578904 RPP30P78346 268 aaKnown RBP11.17□□□□□ -0.62
CSNK1D-209ENST00000578904 MMDQ15546 238 aa11.17□□□□□ -0.62
CSNK1D-209ENST00000578904 LRRC75BQ2VPJ9 315 aa11.17□□□□□ -0.62
CSNK1D-209ENST00000578904 DEFB112Q30KQ8 113 aa11.17□□□□□ -0.62
CSNK1D-209ENST00000578904 TMEM65Q6PI78 240 aa11.17□□□□□ -0.62
CSNK1D-209ENST00000578904 ZNF546Q86UE3 836 aa11.17□□□□□ -0.62
CSNK1D-209ENST00000578904 VKORC1L1Q8N0U8 176 aa11.17□□□□□ -0.62
CSNK1D-209ENST00000578904 OR5B3Q8NH48 314 aa11.17□□□□□ -0.62
CSNK1D-209ENST00000578904 TMEM167AQ8TBQ9 72 aa11.17□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 512.7 ms