RNA–Protein interactions for RNA: ENST00000578525.5

CDK5RAP3-208, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 4

Gene CDK5RAP3, Length 564 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-208ENST00000578525 TREML4Q6UXN2 200 aa7.67□□□□□ -1.18
CDK5RAP3-208ENST00000578525 SPACA3Q8IXA5 215 aa7.67□□□□□ -1.18
CDK5RAP3-208ENST00000578525 IQCF2Q8IXL9 164 aa7.67□□□□□ -1.18
CDK5RAP3-208ENST00000578525 SLC24A4Q8NFF2 622 aa7.67□□□□□ -1.18
CDK5RAP3-208ENST00000578525 OR13D1Q8NGV5 346 aa7.67□□□□□ -1.18
CDK5RAP3-208ENST00000578525 OR4F5Q8NH21 305 aa7.67□□□□□ -1.18
CDK5RAP3-208ENST00000578525 TMEM170AQ8WVE7 144 aa7.67□□□□□ -1.18
CDK5RAP3-208ENST00000578525 ZCCHC14Q8WYQ9 949 aaKnown RBP7.67□□□□□ -1.18
CDK5RAP3-208ENST00000578525 RAB1CQ92928 201 aa7.67□□□□□ -1.18
CDK5RAP3-208ENST00000578525 RHOVQ96L33 236 aa7.67□□□□□ -1.18
CDK5RAP3-208ENST00000578525 OR4F4Q96R69 305 aa7.67□□□□□ -1.18
CDK5RAP3-208ENST00000578525 MGST2Q99735 147 aa7.67□□□□□ -1.18
CDK5RAP3-208ENST00000578525 TCEAL7Q9BRU2 100 aa7.67□□□□□ -1.18
CDK5RAP3-208ENST00000578525 GGTLC1Q9BX51 225 aa7.67□□□□□ -1.18
CDK5RAP3-208ENST00000578525 GAL3ST2Q9H3Q3 398 aa7.67□□□□□ -1.18
CDK5RAP3-208ENST00000578525 MS4A5Q9H3V2 200 aa7.67□□□□□ -1.18
CDK5RAP3-208ENST00000578525 SLC35D1Q9NTN3 355 aa7.67□□□□□ -1.18
CDK5RAP3-208ENST00000578525 TMEM14BQ9NUH8 114 aa7.67□□□□□ -1.18
CDK5RAP3-208ENST00000578525 DCAF16Q9NXF7 216 aa7.67□□□□□ -1.18
CDK5RAP3-208ENST00000578525 PRNDQ9UKY0 176 aa7.67□□□□□ -1.18
CDK5RAP3-208ENST00000578525 PPIAL4EA0A075B759 164 aa7.66□□□□□ -1.18
CDK5RAP3-208ENST00000578525 FNDC10F2Z333 226 aa7.66□□□□□ -1.18
CDK5RAP3-208ENST00000578525 PPIAL4DF5H284 164 aa7.66□□□□□ -1.18
CDK5RAP3-208ENST00000578525 F6UZH7 168 aa7.66□□□□□ -1.18
CDK5RAP3-208ENST00000578525 PAGE4O60829 102 aa7.66□□□□□ -1.18
CDK5RAP3-208ENST00000578525 MMP23AO75900 390 aa7.66□□□□□ -1.18
CDK5RAP3-208ENST00000578525 YIF1AO95070 293 aa7.66□□□□□ -1.18
CDK5RAP3-208ENST00000578525 S100A9P06702 114 aaKnown RBP7.66□□□□□ -1.18
CDK5RAP3-208ENST00000578525 IL6RP08887 468 aaPredicted RBP7.66□□□□□ -1.18
CDK5RAP3-208ENST00000578525 SMIM6P0DI80 62 aa7.66□□□□□ -1.18
CDK5RAP3-208ENST00000578525 CT45A6P0DMU7 189 aa7.66□□□□□ -1.18
CDK5RAP3-208ENST00000578525 CT45A5P0DMU8 189 aa7.66□□□□□ -1.18
CDK5RAP3-208ENST00000578525 CT45A7P0DMV0 189 aa7.66□□□□□ -1.18
CDK5RAP3-208ENST00000578525 PPIAL4FP0DN26 164 aa7.66□□□□□ -1.18
CDK5RAP3-208ENST00000578525 CCL8P80075 99 aa7.66□□□□□ -1.18
CDK5RAP3-208ENST00000578525 RBPJQ06330 500 aa7.66□□□□□ -1.18
CDK5RAP3-208ENST00000578525 FOXC1Q12948 553 aa7.66□□□□□ -1.18
CDK5RAP3-208ENST00000578525 ADIRFQ15847 76 aa7.66□□□□□ -1.18
CDK5RAP3-208ENST00000578525 BSXQ3C1V8 233 aa7.66□□□□□ -1.18
CDK5RAP3-208ENST00000578525 ZNF833PQ6ZTB9 187 aa7.66□□□□□ -1.18
CDK5RAP3-208ENST00000578525 TGIF2LYQ8IUE0 185 aa7.66□□□□□ -1.18
CDK5RAP3-208ENST00000578525 ABHD12Q8N2K0 398 aa7.66□□□□□ -1.18
CDK5RAP3-208ENST00000578525 GATAD1Q8WUU5 269 aa7.66□□□□□ -1.18
CDK5RAP3-208ENST00000578525 RPUSD4Q96CM3 377 aaKnown RBP7.66□□□□□ -1.18
CDK5RAP3-208ENST00000578525 FAM210BQ96KR6 192 aa7.66□□□□□ -1.18
CDK5RAP3-208ENST00000578525 LRFN3Q9BTN0 628 aa7.66□□□□□ -1.18
CDK5RAP3-208ENST00000578525 PARLQ9H300 379 aa7.66□□□□□ -1.18
CDK5RAP3-208ENST00000578525 NPVFQ9HCQ7 196 aa7.66□□□□□ -1.18
CDK5RAP3-208ENST00000578525 SLC25A10Q9UBX3 287 aaPredicted RBP7.66□□□□□ -1.18
CDK5RAP3-208ENST00000578525 SH3BGRL2Q9UJC5 107 aa7.66□□□□□ -1.18
CDK5RAP3-208ENST00000578525 ZNF257Q9Y2Q1 563 aa7.66□□□□□ -1.18
CDK5RAP3-208ENST00000578525 PPIAL4AQ9Y536 164 aa7.66□□□□□ -1.18
CDK5RAP3-208ENST00000578525 OR51B2Q9Y5P1 312 aa7.66□□□□□ -1.18
CDK5RAP3-208ENST00000578525 PXMP4Q9Y6I8 212 aa7.66□□□□□ -1.18
CDK5RAP3-208ENST00000578525 URGCP-MRPS24S4R325 110 aa7.66□□□□□ -1.18
CDK5RAP3-208ENST00000578525 TRBV24-1A0A075B6N3 115 aa7.65□□□□□ -1.18
CDK5RAP3-208ENST00000578525 A0A1W2PPV4 95 aa7.65□□□□□ -1.18
CDK5RAP3-208ENST00000578525 TMEM178BH3BS89 294 aa7.65□□□□□ -1.18
CDK5RAP3-208ENST00000578525 CA2P00918 260 aa7.65□□□□□ -1.18
CDK5RAP3-208ENST00000578525 APOA2P02652 100 aa7.65□□□□□ -1.18
CDK5RAP3-208ENST00000578525 RPL23P62829 140 aaKnown RBP7.65□□□□□ -1.18
CDK5RAP3-208ENST00000578525 MIC13Q5XKP0 118 aa7.65□□□□□ -1.18
CDK5RAP3-208ENST00000578525 ASCL5Q7RTU5 278 aa7.65□□□□□ -1.18
CDK5RAP3-208ENST00000578525 C16orf82Q7Z2V1 217 aa7.65□□□□□ -1.18
CDK5RAP3-208ENST00000578525 SNRNP40Q96DI7 357 aaKnown RBP7.65□□□□□ -1.18
CDK5RAP3-208ENST00000578525 SAP30LQ9HAJ7 183 aa7.65□□□□□ -1.18
CDK5RAP3-208ENST00000578525 NGBQ9NPG2 151 aa7.65□□□□□ -1.18
CDK5RAP3-208ENST00000578525 TANC2Q9HCD6 1990 aa7.64□□□□□ -1.19
CDK5RAP3-208ENST00000578525 PCP4L1A6NKN8 68 aa7.64□□□□□ -1.19
CDK5RAP3-208ENST00000578525 C11orf94C9JXX5 98 aa7.64□□□□□ -1.19
CDK5RAP3-208ENST00000578525 H7BYZ3 331 aa7.64□□□□□ -1.19
CDK5RAP3-208ENST00000578525 K7ENP7 123 aa7.64□□□□□ -1.19
CDK5RAP3-208ENST00000578525 TNFRSF13BO14836 293 aaPredicted RBP7.64□□□□□ -1.19
CDK5RAP3-208ENST00000578525 TMPRSS2O15393 492 aa7.64□□□□□ -1.19
CDK5RAP3-208ENST00000578525 NDUFB3O43676 98 aa7.64□□□□□ -1.19
CDK5RAP3-208ENST00000578525 PDE6DO43924 150 aa7.64□□□□□ -1.19
CDK5RAP3-208ENST00000578525 VENTXO95231 258 aa7.64□□□□□ -1.19
CDK5RAP3-208ENST00000578525 STAG3L2P0CL84 134 aa7.64□□□□□ -1.19
CDK5RAP3-208ENST00000578525 STAG3L3P0CL85 134 aa7.64□□□□□ -1.19
CDK5RAP3-208ENST00000578525 HOXA5P20719 270 aa7.64□□□□□ -1.19
CDK5RAP3-208ENST00000578525 ATP5IP56385 69 aaPredicted RBP7.64□□□□□ -1.19
CDK5RAP3-208ENST00000578525 NDUFA6P56556 154 aa7.64□□□□□ -1.19
CDK5RAP3-208ENST00000578525 RPL31P62899 125 aaKnown RBP7.64□□□□□ -1.19
CDK5RAP3-208ENST00000578525 S100A12P80511 92 aa7.64□□□□□ -1.19
CDK5RAP3-208ENST00000578525 PRCDQ00LT1 54 aa7.64□□□□□ -1.19
CDK5RAP3-208ENST00000578525 RAB31Q13636 194 aa7.64□□□□□ -1.19
CDK5RAP3-208ENST00000578525 PRR30Q53SZ7 412 aaPredicted RBP7.64□□□□□ -1.19
CDK5RAP3-208ENST00000578525 ARSJQ5FYB0 599 aaPredicted RBP7.64□□□□□ -1.19
CDK5RAP3-208ENST00000578525 GCSAMLQ5JQS6 135 aa7.64□□□□□ -1.19
CDK5RAP3-208ENST00000578525 NCMAPQ5T1S8 102 aa7.64□□□□□ -1.19
CDK5RAP3-208ENST00000578525 FAM71F2Q6NXP2 309 aa7.64□□□□□ -1.19
CDK5RAP3-208ENST00000578525 C8orf31Q8N9H6 132 aa7.64□□□□□ -1.19
CDK5RAP3-208ENST00000578525 RND1Q92730 232 aa7.64□□□□□ -1.19
CDK5RAP3-208ENST00000578525 ZNF714Q96N38 554 aa7.64□□□□□ -1.19
CDK5RAP3-208ENST00000578525 SSX3Q99909 188 aa7.64□□□□□ -1.19
CDK5RAP3-208ENST00000578525 TXNDC17Q9BRA2 123 aa7.64□□□□□ -1.19
CDK5RAP3-208ENST00000578525 MRPL20Q9BYC9 149 aaKnown RBP7.64□□□□□ -1.19
CDK5RAP3-208ENST00000578525 PLEKHA3Q9HB20 300 aa7.64□□□□□ -1.19
CDK5RAP3-208ENST00000578525 DYNLRB1Q9NP97 96 aa7.64□□□□□ -1.19
CDK5RAP3-208ENST00000578525 TMEM106BQ9NUM4 274 aa7.64□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms