RNA–Protein interactions for RNA: ENST00000578172.1

NDEL1-204, Transcript of nudE neurodevelopment protein 1 like 1, humanhuman

Gene NDEL1, Length 3,927 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDEL1-204ENST00000578172 ZNF645Q8N7E2 425 aa11.42□□□□□ -0.58
NDEL1-204ENST00000578172 COQ2Q96H96 371 aa11.42□□□□□ -0.58
NDEL1-204ENST00000578172 HSD17B10Q99714 261 aaKnown RBP11.42□□□□□ -0.58
NDEL1-204ENST00000578172 DCAF16Q9NXF7 216 aa11.42□□□□□ -0.58
NDEL1-204ENST00000578172 CLCF1Q9UBD9 225 aa11.42□□□□□ -0.58
NDEL1-204ENST00000578172 NAT8Q9UHE5 227 aa11.42□□□□□ -0.58
NDEL1-204ENST00000578172 C20orf202A1L168 122 aa11.41□□□□□ -0.58
NDEL1-204ENST00000578172 OOEPA6NGQ2 149 aa11.41□□□□□ -0.58
NDEL1-204ENST00000578172 SIAH2O43255 324 aa11.41□□□□□ -0.58
NDEL1-204ENST00000578172 HNRNPA3P51991 378 aaKnown RBP11.41□□□□□ -0.58
NDEL1-204ENST00000578172 DMRTC2Q8IXT2 367 aaPredicted RBP11.41□□□□□ -0.58
NDEL1-204ENST00000578172 OR4P4Q8NGL7 312 aa11.41□□□□□ -0.58
NDEL1-204ENST00000578172 OR4X1Q8NH49 305 aa11.41□□□□□ -0.58
NDEL1-204ENST00000578172 CMTM2Q8TAZ6 248 aa11.41□□□□□ -0.58
NDEL1-204ENST00000578172 ITLN1Q8WWA0 313 aa11.41□□□□□ -0.58
NDEL1-204ENST00000578172 IGHV3-72A0A0B4J1Y9 119 aa11.41□□□□□ -0.58
NDEL1-204ENST00000578172 F6UZH7 168 aa11.41□□□□□ -0.58
NDEL1-204ENST00000578172 RRHO14718 337 aa11.41□□□□□ -0.58
NDEL1-204ENST00000578172 RPLP1P05386 114 aaKnown RBP11.41□□□□□ -0.58
NDEL1-204ENST00000578172 AMTP48728 403 aa11.41□□□□□ -0.58
NDEL1-204ENST00000578172 MOB3BQ86TA1 216 aa11.41□□□□□ -0.58
NDEL1-204ENST00000578172 C11orf42Q8N5U0 333 aa11.41□□□□□ -0.58
NDEL1-204ENST00000578172 HIST1H2BLQ99880 126 aa11.41□□□□□ -0.58
NDEL1-204ENST00000578172 SDF2L1Q9HCN8 221 aa11.41□□□□□ -0.58
NDEL1-204ENST00000578172 ZNF71Q9NQZ8 489 aaPredicted RBP11.41□□□□□ -0.58
NDEL1-204ENST00000578172 FAM90A10PA6NDY2 464 aa11.41□□□□□ -0.58
NDEL1-204ENST00000578172 FAM90A18PA6NE21 464 aa11.41□□□□□ -0.58
NDEL1-204ENST00000578172 FAM90A16PA6NEW6 464 aa11.41□□□□□ -0.58
NDEL1-204ENST00000578172 FAM90A20PA6NIJ5 464 aa11.41□□□□□ -0.58
NDEL1-204ENST00000578172 FAM90A8PA6NJQ4 464 aa11.41□□□□□ -0.58
NDEL1-204ENST00000578172 FAM90A7PA6NKC0 464 aa11.41□□□□□ -0.58
NDEL1-204ENST00000578172 FAM90A22PA8MWA6 464 aa11.41□□□□□ -0.58
NDEL1-204ENST00000578172 FAM90A12PA8MX19 464 aa11.41□□□□□ -0.58
NDEL1-204ENST00000578172 FAM90A5PA8MXJ8 464 aa11.41□□□□□ -0.58
NDEL1-204ENST00000578172 FAM90A23PA8MXZ1 464 aa11.41□□□□□ -0.58
NDEL1-204ENST00000578172 C17orf112F2Z3M2 114 aa11.41□□□□□ -0.58
NDEL1-204ENST00000578172 FAM90A15PP0C7V4 464 aa11.41□□□□□ -0.58
NDEL1-204ENST00000578172 FAM90A13PP0C7W8 464 aa11.41□□□□□ -0.58
NDEL1-204ENST00000578172 FAM90A14PP0C7W9 464 aa11.41□□□□□ -0.58
NDEL1-204ENST00000578172 FAM90A24PP0C7X0 464 aa11.41□□□□□ -0.58
NDEL1-204ENST00000578172 Q6ZN92 141 aa11.41□□□□□ -0.58
NDEL1-204ENST00000578172 ZNF295-AS1Q8N0V1 137 aa11.41□□□□□ -0.58
NDEL1-204ENST00000578172 NEIL1Q96FI4 390 aaPredicted RBP11.41□□□□□ -0.58
NDEL1-204ENST00000578172 ZNF586Q9NXT0 402 aa11.41□□□□□ -0.58
NDEL1-204ENST00000578172 MAP1AP78559 2803 aaPredicted RBP11.41□□□□□ -0.58
NDEL1-204ENST00000578172 FCN1O00602 326 aa11.41□□□□□ -0.58
NDEL1-204ENST00000578172 TMPRSS2O15393 492 aa11.41□□□□□ -0.58
NDEL1-204ENST00000578172 ARL14EPLP0DKL9 152 aa11.41□□□□□ -0.58
NDEL1-204ENST00000578172 RAB4AP20338 218 aa11.41□□□□□ -0.58
NDEL1-204ENST00000578172 CD1BP29016 333 aa11.41□□□□□ -0.58
NDEL1-204ENST00000578172 RPL23P62829 140 aaKnown RBP11.41□□□□□ -0.58
NDEL1-204ENST00000578172 ACOT6Q3I5F7 207 aaPredicted RBP11.41□□□□□ -0.58
NDEL1-204ENST00000578172 LYPD6BQ8NI32 183 aa11.41□□□□□ -0.58
NDEL1-204ENST00000578172 NPCDR1Q9BY65 106 aa11.41□□□□□ -0.58
NDEL1-204ENST00000578172 KLF2Q9Y5W3 355 aaPredicted RBP11.41□□□□□ -0.58
NDEL1-204ENST00000578172 NOTCH3Q9UM47 2321 aa11.4□□□□□ -0.58
NDEL1-204ENST00000578172 C21orf140B9A014 251 aa11.4□□□□□ -0.58
NDEL1-204ENST00000578172 H3BTX0 84 aa11.4□□□□□ -0.58
NDEL1-204ENST00000578172 CDX4O14627 284 aaPredicted RBP11.4□□□□□ -0.58
NDEL1-204ENST00000578172 DLX1P56177 255 aa11.4□□□□□ -0.58
NDEL1-204ENST00000578172 CD81P60033 236 aa11.4□□□□□ -0.58
NDEL1-204ENST00000578172 WDR82Q6UXN9 313 aa11.4□□□□□ -0.58
NDEL1-204ENST00000578172 Q8IYB0 196 aa11.4□□□□□ -0.58
NDEL1-204ENST00000578172 SAXO1Q8IYX7 474 aa11.4□□□□□ -0.58
NDEL1-204ENST00000578172 ATOH7Q8N100 152 aa11.4□□□□□ -0.58
NDEL1-204ENST00000578172 OR4C5Q8NGB2 326 aa11.4□□□□□ -0.58
NDEL1-204ENST00000578172 SGMS2Q8NHU3 365 aa11.4□□□□□ -0.58
NDEL1-204ENST00000578172 PKIBQ9C010 78 aa11.4□□□□□ -0.58
NDEL1-204ENST00000578172 CXXC4Q9H2H0 198 aa11.4□□□□□ -0.58
NDEL1-204ENST00000578172 CREBBPQ92793 2442 aa11.4□□□□□ -0.58
NDEL1-204ENST00000578172 FXYD3Q14802 87 aa11.4□□□□□ -0.58
NDEL1-204ENST00000578172 MLANAQ16655 118 aa11.4□□□□□ -0.58
NDEL1-204ENST00000578172 MOB1BQ7L9L4 216 aa11.4□□□□□ -0.58
NDEL1-204ENST00000578172 C1QL4Q86Z23 238 aa11.4□□□□□ -0.58
NDEL1-204ENST00000578172 TGIF2LYQ8IUE0 185 aa11.4□□□□□ -0.58
NDEL1-204ENST00000578172 HIST3H2BBQ8N257 126 aa11.4□□□□□ -0.58
NDEL1-204ENST00000578172 OR8G5Q8NG78 346 aa11.4□□□□□ -0.58
NDEL1-204ENST00000578172 GMPPAQ96IJ6 420 aaPredicted RBP11.4□□□□□ -0.58
NDEL1-204ENST00000578172 HSPB9Q9BQS6 159 aa11.4□□□□□ -0.58
NDEL1-204ENST00000578172 CTXND1A0A1B0GTU2 59 aa11.4□□□□□ -0.59
NDEL1-204ENST00000578172 APOA2P02652 100 aa11.4□□□□□ -0.59
NDEL1-204ENST00000578172 SPCS3P61009 180 aa11.4□□□□□ -0.59
NDEL1-204ENST00000578172 RPP30P78346 268 aaKnown RBP11.4□□□□□ -0.59
NDEL1-204ENST00000578172 PNRC1Q12796 327 aaPredicted RBP11.4□□□□□ -0.59
NDEL1-204ENST00000578172 SPATA31B1PQ5VZV4 182 aa11.4□□□□□ -0.59
NDEL1-204ENST00000578172 ACP7Q6ZNF0 438 aa11.4□□□□□ -0.59
NDEL1-204ENST00000578172 UHRF2Q96PU4 802 aa11.4□□□□□ -0.59
NDEL1-204ENST00000578172 CISD1Q9NZ45 108 aaKnown RBP11.4□□□□□ -0.59
NDEL1-204ENST00000578172 NAT8BQ9UHF3 227 aa11.4□□□□□ -0.59
NDEL1-204ENST00000578172 WT1P19544 449 aaPredicted RBP11.39□□□□□ -0.59
NDEL1-204ENST00000578172 TNFSF10P50591 281 aa11.39□□□□□ -0.59
NDEL1-204ENST00000578172 WIPI2Q9Y4P8 454 aa11.39□□□□□ -0.59
NDEL1-204ENST00000578172 CHD8Q9HCK8 2581 aa11.39□□□□□ -0.59
NDEL1-204ENST00000578172 IFITM10A6NMD0 228 aa11.39□□□□□ -0.59
NDEL1-204ENST00000578172 IGLV2-14P01704 120 aa11.39□□□□□ -0.59
NDEL1-204ENST00000578172 IGHV2-5P01817 119 aa11.39□□□□□ -0.59
NDEL1-204ENST00000578172 COTL1Q14019 142 aa11.39□□□□□ -0.59
NDEL1-204ENST00000578172 GABRA6Q16445 453 aa11.39□□□□□ -0.59
NDEL1-204ENST00000578172 CCL17Q92583 94 aa11.39□□□□□ -0.59
NDEL1-204ENST00000578172 CRISP2P16562 243 aa11.39□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms