RNA–Protein interactions for RNA: ENST00000577827.5

PTPRM-205, Transcript of protein tyrosine phosphatase, receptor type M, humanhuman

TSL 2

Gene PTPRM, Length 4,640 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRM-205ENST00000577827 NMSQ5H8A3 153 aa8.79□□□□□ -1
PTPRM-205ENST00000577827 CYB5R2Q6BCY4 276 aa8.79□□□□□ -1
PTPRM-205ENST00000577827 ZNF826PQ6ZT77 177 aa8.79□□□□□ -1
PTPRM-205ENST00000577827 SAP25Q8TEE9 199 aa8.79□□□□□ -1
PTPRM-205ENST00000577827 KCNS1Q96KK3 526 aa8.79□□□□□ -1
PTPRM-205ENST00000577827 AGMATQ9BSE5 352 aa8.79□□□□□ -1
PTPRM-205ENST00000577827 SOX21Q9Y651 276 aaPredicted RBP8.79□□□□□ -1
PTPRM-205ENST00000577827 OR2J3O76001 311 aa8.78□□□□□ -1
PTPRM-205ENST00000577827 ATP5G3P48201 142 aa8.78□□□□□ -1
PTPRM-205ENST00000577827 TNFSF10P50591 281 aa8.78□□□□□ -1
PTPRM-205ENST00000577827 ZNF436-AS1Q8NC38 126 aaPredicted RBP8.78□□□□□ -1
PTPRM-205ENST00000577827 KLF14Q8TD94 323 aaPredicted RBP8.78□□□□□ -1
PTPRM-205ENST00000577827 DIRC2Q96SL1 478 aa8.78□□□□□ -1
PTPRM-205ENST00000577827 ARHGEF17Q96PE2 2063 aaPredicted RBP8.78□□□□□ -1
PTPRM-205ENST00000577827 RPL27AP46776 148 aaKnown RBP8.78□□□□□ -1
PTPRM-205ENST00000577827 CLDN18P56856 261 aa8.78□□□□□ -1
PTPRM-205ENST00000577827 RELBQ01201 579 aa8.78□□□□□ -1
PTPRM-205ENST00000577827 DMRTA1Q5VZB9 504 aa8.78□□□□□ -1
PTPRM-205ENST00000577827 OR51G1Q8NGK1 321 aa8.78□□□□□ -1
PTPRM-205ENST00000577827 GRAMD2BQ96HH9 432 aa8.78□□□□□ -1
PTPRM-205ENST00000577827 RALGAPA1Q6GYQ0 2036 aa8.78□□□□□ -1
PTPRM-205ENST00000577827 TIAF1O95411 115 aa8.78□□□□□ -1
PTPRM-205ENST00000577827 OR8B3Q8NGG8 313 aa8.78□□□□□ -1
PTPRM-205ENST00000577827 OR10AG1Q8NH19 301 aa8.78□□□□□ -1
PTPRM-205ENST00000577827 SMOC1Q9H4F8 434 aa8.78□□□□□ -1
PTPRM-205ENST00000577827 PRDM13Q9H4Q3 707 aa8.78□□□□□ -1
PTPRM-205ENST00000577827 KLF2Q9Y5W3 355 aaPredicted RBP8.78□□□□□ -1
PTPRM-205ENST00000577827 NLRC5Q86WI3 1866 aa8.77□□□□□ -1
PTPRM-205ENST00000577827 SCGB1C2P0DMR2 95 aa8.77□□□□□ -1
PTPRM-205ENST00000577827 FABP2P12104 132 aa8.77□□□□□ -1
PTPRM-205ENST00000577827 GNB2P62879 340 aa8.77□□□□□ -1
PTPRM-205ENST00000577827 HBBP68871 147 aa8.77□□□□□ -1
PTPRM-205ENST00000577827 FOXL1Q12952 345 aa8.77□□□□□ -1
PTPRM-205ENST00000577827 ZDHHC16Q969W1 377 aa8.77□□□□□ -1
PTPRM-205ENST00000577827 INSIG2Q9Y5U4 225 aa8.77□□□□□ -1
PTPRM-205ENST00000577827 IGHV3OR15-7A0A075B7D8 119 aa8.77□□□□□ -1.01
PTPRM-205ENST00000577827 SCO2A0A1W2PP80 73 aa8.77□□□□□ -1.01
PTPRM-205ENST00000577827 SERF1AO75920 110 aa8.77□□□□□ -1.01
PTPRM-205ENST00000577827 CLPSP04118 112 aa8.77□□□□□ -1.01
PTPRM-205ENST00000577827 CEBPDP49716 269 aaPredicted RBP8.77□□□□□ -1.01
PTPRM-205ENST00000577827 RND2P52198 227 aa8.77□□□□□ -1.01
PTPRM-205ENST00000577827 NUTF2P61970 127 aaKnown RBP8.77□□□□□ -1.01
PTPRM-205ENST00000577827 GFI1BQ5VTD9 330 aa8.77□□□□□ -1.01
PTPRM-205ENST00000577827 WBP1Q96G27 269 aa8.77□□□□□ -1.01
PTPRM-205ENST00000577827 FSCN3Q9NQT6 498 aa8.77□□□□□ -1.01
PTPRM-205ENST00000577827 IDI2-AS1Q9NZ38 188 aa8.77□□□□□ -1.01
PTPRM-205ENST00000577827 PEF1Q9UBV8 284 aaKnown RBP8.77□□□□□ -1.01
PTPRM-205ENST00000577827 LAMTOR2Q9Y2Q5 125 aa8.77□□□□□ -1.01
PTPRM-205ENST00000577827 TMEM177Q53S58 311 aa8.77□□□□□ -1.01
PTPRM-205ENST00000577827 PSMG4Q5JS54 123 aa8.77□□□□□ -1.01
PTPRM-205ENST00000577827 C1orf194Q5T5A4 169 aa8.77□□□□□ -1.01
PTPRM-205ENST00000577827 ZNF324BQ6AW86 544 aaPredicted RBP8.77□□□□□ -1.01
PTPRM-205ENST00000577827 PCSK4Q6UW60 755 aa8.77□□□□□ -1.01
PTPRM-205ENST00000577827 Q6ZS49 121 aa8.77□□□□□ -1.01
PTPRM-205ENST00000577827 ZNF837Q96EG3 531 aaPredicted RBP8.77□□□□□ -1.01
PTPRM-205ENST00000577827 TNFRSF19Q9NS68 423 aa8.77□□□□□ -1.01
PTPRM-205ENST00000577827 HSPB7Q9UBY9 170 aa8.77□□□□□ -1.01
PTPRM-205ENST00000577827 R4GN57 208 aa8.77□□□□□ -1.01
PTPRM-205ENST00000577827 C17orf98A8MV24 154 aa8.77□□□□□ -1.01
PTPRM-205ENST00000577827 PLAURQ03405 335 aa8.77□□□□□ -1.01
PTPRM-205ENST00000577827 PRNTQ86SH4 94 aa8.77□□□□□ -1.01
PTPRM-205ENST00000577827 RND1Q92730 232 aa8.77□□□□□ -1.01
PTPRM-205ENST00000577827 IMMP1LQ96LU5 166 aa8.77□□□□□ -1.01
PTPRM-205ENST00000577827 ZNF714Q96N38 554 aa8.77□□□□□ -1.01
PTPRM-205ENST00000577827 SLC25A10Q9UBX3 287 aaPredicted RBP8.77□□□□□ -1.01
PTPRM-205ENST00000577827 LOC102723996A0A087X1L8 192 aa8.76□□□□□ -1.01
PTPRM-205ENST00000577827 NCBP2LA6PVI3 153 aaKnown RBP8.76□□□□□ -1.01
PTPRM-205ENST00000577827 SLC17A3O00476 420 aa8.76□□□□□ -1.01
PTPRM-205ENST00000577827 MRPL14Q6P1L8 145 aaKnown RBP8.76□□□□□ -1.01
PTPRM-205ENST00000577827 C1orf210Q8IVY1 113 aa8.76□□□□□ -1.01
PTPRM-205ENST00000577827 WDR83OSQ9Y284 106 aa8.76□□□□□ -1.01
PTPRM-205ENST00000577827 IGKV1-12A0A0C4DH73 117 aa8.76□□□□□ -1.01
PTPRM-205ENST00000577827 TNFSF13O75888 250 aa8.76□□□□□ -1.01
PTPRM-205ENST00000577827 IGKV1D-12P01611 117 aa8.76□□□□□ -1.01
PTPRM-205ENST00000577827 RSPO4Q2I0M5 234 aaPredicted RBP8.76□□□□□ -1.01
PTPRM-205ENST00000577827 MYOZ3Q8TDC0 251 aa8.76□□□□□ -1.01
PTPRM-205ENST00000577827 FAM131CQ96AQ9 280 aa8.76□□□□□ -1.01
PTPRM-205ENST00000577827 OR8B2Q96RD0 313 aa8.76□□□□□ -1.01
PTPRM-205ENST00000577827 CDX2Q99626 313 aaPredicted RBP8.76□□□□□ -1.01
PTPRM-205ENST00000577827 NRN1Q9NPD7 142 aa8.76□□□□□ -1.01
PTPRM-205ENST00000577827 OSTCQ9NRP0 149 aa8.76□□□□□ -1.01
PTPRM-205ENST00000577827 FAM90A9PA6NNJ1 464 aa8.76□□□□□ -1.01
PTPRM-205ENST00000577827 FAM222BQ8WU58 562 aa8.76□□□□□ -1.01
PTPRM-205ENST00000577827 C14orf144Q96I85 54 aa8.76□□□□□ -1.01
PTPRM-205ENST00000577827 GNB1LQ9BYB4 327 aa8.76□□□□□ -1.01
PTPRM-205ENST00000577827 PNRC2Q9NPJ4 139 aaKnown RBP8.76□□□□□ -1.01
PTPRM-205ENST00000577827 DCAF16Q9NXF7 216 aa8.76□□□□□ -1.01
PTPRM-205ENST00000577827 BMI1P35226 326 aa8.76□□□□□ -1.01
PTPRM-205ENST00000577827 SSTR5P35346 364 aa8.76□□□□□ -1.01
PTPRM-205ENST00000577827 RPL13AP40429 203 aaKnown RBP8.76□□□□□ -1.01
PTPRM-205ENST00000577827 HERVK_113P61574 105 aa8.76□□□□□ -1.01
PTPRM-205ENST00000577827 SMIM12Q96EX1 92 aa8.76□□□□□ -1.01
PTPRM-205ENST00000577827 MS4A5Q9H3V2 200 aa8.76□□□□□ -1.01
PTPRM-205ENST00000577827 ONECUT1Q9UBC0 465 aa8.76□□□□□ -1.01
PTPRM-205ENST00000577827 IZUMO1RA6ND01 250 aa8.75□□□□□ -1.01
PTPRM-205ENST00000577827 PRR33A8MZF0 331 aa8.75□□□□□ -1.01
PTPRM-205ENST00000577827 C9JQL5 133 aa8.75□□□□□ -1.01
PTPRM-205ENST00000577827 RRHO14718 337 aa8.75□□□□□ -1.01
PTPRM-205ENST00000577827 RBFOX2O43251 390 aaKnown RBP eCLIP8.75□□□□□ -1.012e-6■■■■□ 22.1
PTPRM-205ENST00000577827 NAPSAO96009 420 aa8.75□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 52.2 ms