RNA–Protein interactions for RNA: ENST00000577300.1

SMCHD1-202, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 3

Gene SMCHD1, Length 506 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-202ENST00000577300 CSN2P05814 226 aa2.29□□□□□ -2.04
SMCHD1-202ENST00000577300 HIST1H2BJP06899 126 aa2.29□□□□□ -2.04
SMCHD1-202ENST00000577300 DBIP07108 87 aaKnown RBP2.29□□□□□ -2.04
SMCHD1-202ENST00000577300 SLC35G6P0C7Q6 338 aa2.29□□□□□ -2.04
SMCHD1-202ENST00000577300 AKAIN1P0CW23 69 aa2.29□□□□□ -2.04
SMCHD1-202ENST00000577300 CPMP14384 443 aa2.29□□□□□ -2.04
SMCHD1-202ENST00000577300 PGCP20142 388 aa2.29□□□□□ -2.04
SMCHD1-202ENST00000577300 HIST1H2BOP23527 126 aa2.29□□□□□ -2.04
SMCHD1-202ENST00000577300 HIST1H2BBP33778 126 aa2.29□□□□□ -2.04
SMCHD1-202ENST00000577300 G6PCP35575 357 aa2.29□□□□□ -2.04
SMCHD1-202ENST00000577300 RPL13AP40429 203 aaKnown RBP2.29□□□□□ -2.04
SMCHD1-202ENST00000577300 KLK7P49862 253 aa2.29□□□□□ -2.04
SMCHD1-202ENST00000577300 SSR4P51571 173 aa2.29□□□□□ -2.04
SMCHD1-202ENST00000577300 POLR2HP52434 150 aaKnown RBP2.29□□□□□ -2.04
SMCHD1-202ENST00000577300 EMP1P54849 157 aa2.29□□□□□ -2.04
SMCHD1-202ENST00000577300 LIM2P55344 173 aa2.29□□□□□ -2.04
SMCHD1-202ENST00000577300 CTBP2P56545 445 aa2.29□□□□□ -2.04
SMCHD1-202ENST00000577300 HIST1H2BDP58876 126 aa2.29□□□□□ -2.04
SMCHD1-202ENST00000577300 TAS2R20P59543 309 aa2.29□□□□□ -2.04
SMCHD1-202ENST00000577300 RPS14P62263 151 aaKnown RBP2.29□□□□□ -2.04
SMCHD1-202ENST00000577300 HIST1H2BCP62807 126 aa2.29□□□□□ -2.04
SMCHD1-202ENST00000577300 HIST1H3AP68431 136 aa2.29□□□□□ -2.04
SMCHD1-202ENST00000577300 SLC35A2P78381 396 aa2.29□□□□□ -2.04
SMCHD1-202ENST00000577300 H3F3AP84243 136 aa2.29□□□□□ -2.04
SMCHD1-202ENST00000577300 TGFBR3Q03167 851 aa2.29□□□□□ -2.04
SMCHD1-202ENST00000577300 UBE2V2Q15819 145 aa2.29□□□□□ -2.04
SMCHD1-202ENST00000577300 HIST2H2BEQ16778 126 aa2.29□□□□□ -2.04
SMCHD1-202ENST00000577300 COA6Q5JTJ3 125 aaKnown RBP2.29□□□□□ -2.04
SMCHD1-202ENST00000577300 HIST2H2BFQ5QNW6 126 aaPredicted RBP2.29□□□□□ -2.04
SMCHD1-202ENST00000577300 BCL2L15Q5TBC7 163 aa2.29□□□□□ -2.04
SMCHD1-202ENST00000577300 Q5XG85 94 aa2.29□□□□□ -2.04
SMCHD1-202ENST00000577300 ZNF660Q6AZW8 331 aaPredicted RBP2.29□□□□□ -2.04
SMCHD1-202ENST00000577300 AMMECR1LQ6DCA0 310 aa2.29□□□□□ -2.04
SMCHD1-202ENST00000577300 CNIH2Q6PI25 160 aa2.29□□□□□ -2.04
SMCHD1-202ENST00000577300 EPGNQ6UW88 154 aa2.29□□□□□ -2.04
SMCHD1-202ENST00000577300 HRCT1Q6UXD1 115 aa2.29□□□□□ -2.04
SMCHD1-202ENST00000577300 FAM231DQ6ZW35 169 aa2.29□□□□□ -2.04
SMCHD1-202ENST00000577300 HIST2H3AQ71DI3 136 aa2.29□□□□□ -2.04
SMCHD1-202ENST00000577300 ANKRD37Q7Z713 158 aa2.29□□□□□ -2.04
SMCHD1-202ENST00000577300 LINC01561Q8N1V8 128 aa2.29□□□□□ -2.04
SMCHD1-202ENST00000577300 EXOC3-AS1Q8N2X6 119 aa2.29□□□□□ -2.04
SMCHD1-202ENST00000577300 OR11H7Q8NGC8 314 aa2.29□□□□□ -2.04
SMCHD1-202ENST00000577300 OR5A1Q8NGJ0 315 aa2.29□□□□□ -2.04
SMCHD1-202ENST00000577300 OR2G3Q8NGZ4 309 aa2.29□□□□□ -2.04
SMCHD1-202ENST00000577300 PIFOQ8TCI5 191 aa2.29□□□□□ -2.04
SMCHD1-202ENST00000577300 ZNF675Q8TD23 568 aa2.29□□□□□ -2.04
SMCHD1-202ENST00000577300 HIST1H2BHQ93079 126 aa2.29□□□□□ -2.04
SMCHD1-202ENST00000577300 CARD19Q96LW7 228 aa2.29□□□□□ -2.04
SMCHD1-202ENST00000577300 CIB3Q96Q77 187 aaPredicted RBP2.29□□□□□ -2.04
SMCHD1-202ENST00000577300 LYSMD1Q96S90 227 aa2.29□□□□□ -2.04
SMCHD1-202ENST00000577300 LINC01587Q99440 93 aa2.29□□□□□ -2.04
SMCHD1-202ENST00000577300 GPER1Q99527 375 aa2.29□□□□□ -2.04
SMCHD1-202ENST00000577300 HSD17B10Q99714 261 aaKnown RBP2.29□□□□□ -2.04
SMCHD1-202ENST00000577300 HIST1H2BNQ99877 126 aa2.29□□□□□ -2.04
SMCHD1-202ENST00000577300 HIST1H2BMQ99879 126 aa2.29□□□□□ -2.04
SMCHD1-202ENST00000577300 GINS4Q9BRT9 223 aa2.29□□□□□ -2.04
SMCHD1-202ENST00000577300 PBDC1Q9BVG4 233 aa2.29□□□□□ -2.04
SMCHD1-202ENST00000577300 TSSK6Q9BXA6 273 aa2.29□□□□□ -2.04
SMCHD1-202ENST00000577300 ATG5Q9H1Y0 275 aa2.29□□□□□ -2.04
SMCHD1-202ENST00000577300 SH3BGRL3Q9H299 93 aa2.29□□□□□ -2.04
SMCHD1-202ENST00000577300 NOX3Q9HBY0 568 aa2.29□□□□□ -2.04
SMCHD1-202ENST00000577300 HES4Q9HCC6 221 aa2.29□□□□□ -2.04
SMCHD1-202ENST00000577300 NPVFQ9HCQ7 196 aa2.29□□□□□ -2.04
SMCHD1-202ENST00000577300 EXOSC4Q9NPD3 245 aaKnown RBP2.29□□□□□ -2.04
SMCHD1-202ENST00000577300 MCTS1Q9ULC4 181 aaKnown RBP2.29□□□□□ -2.04
SMCHD1-202ENST00000577300 SIGLEC7Q9Y286 467 aa2.29□□□□□ -2.04
SMCHD1-202ENST00000577300 BTRCQ9Y297 605 aa2.29□□□□□ -2.04
SMCHD1-202ENST00000577300 ZNF443Q9Y2A4 671 aaPredicted RBP2.29□□□□□ -2.04
SMCHD1-202ENST00000577300 KLF12Q9Y4X4 402 aa2.29□□□□□ -2.04
SMCHD1-202ENST00000577300 LSM5Q9Y4Y9 91 aaKnown RBP2.29□□□□□ -2.04
SMCHD1-202ENST00000577300 ORC6Q9Y5N6 252 aa2.29□□□□□ -2.04
SMCHD1-202ENST00000577300 CDC42BPAQ5VT25 1732 aa2.28□□□□□ -2.04
SMCHD1-202ENST00000577300 ZC3H13Q5T200 1668 aaKnown RBP2.28□□□□□ -2.04
SMCHD1-202ENST00000577300 CAMTA1Q9Y6Y1 1673 aa2.28□□□□□ -2.04
SMCHD1-202ENST00000577300 KIF14Q15058 1648 aa2.28□□□□□ -2.04
SMCHD1-202ENST00000577300 HECW2Q9P2P5 1572 aa2.28□□□□□ -2.04
SMCHD1-202ENST00000577300 HMGXB3Q12766 1538 aa2.28□□□□□ -2.04
SMCHD1-202ENST00000577300 CDK13Q14004 1512 aaKnown RBP2.28□□□□□ -2.04
SMCHD1-202ENST00000577300 DENND4BO75064 1496 aaPredicted RBP2.28□□□□□ -2.04
SMCHD1-202ENST00000577300 PZPP20742 1482 aa2.28□□□□□ -2.04
SMCHD1-202ENST00000577300 NEO1Q92859 1461 aa2.28□□□□□ -2.04
SMCHD1-202ENST00000577300 FAM236DA0A1B0GTK5 79 aa2.28□□□□□ -2.04
SMCHD1-202ENST00000577300 DUXBA0A1W2PPF3 345 aa2.28□□□□□ -2.04
SMCHD1-202ENST00000577300 IGLC7A0M8Q6 106 aa2.28□□□□□ -2.04
SMCHD1-202ENST00000577300 ODAMA1E959 279 aa2.28□□□□□ -2.04
SMCHD1-202ENST00000577300 INMT-MINDY4F8WBC2 141 aa2.28□□□□□ -2.04
SMCHD1-202ENST00000577300 K7EMT4 169 aa2.28□□□□□ -2.04
SMCHD1-202ENST00000577300 SLC37A4O43826 429 aa2.28□□□□□ -2.04
SMCHD1-202ENST00000577300 FAM236CP0DP71 79 aa2.28□□□□□ -2.04
SMCHD1-202ENST00000577300 ATF1P18846 271 aa2.28□□□□□ -2.04
SMCHD1-202ENST00000577300 CNTFRP26992 372 aa2.28□□□□□ -2.04
SMCHD1-202ENST00000577300 ZNF140P52738 457 aaPredicted RBP2.28□□□□□ -2.04
SMCHD1-202ENST00000577300 AKR1C1Q04828 323 aa2.28□□□□□ -2.04
SMCHD1-202ENST00000577300 SLC38A11Q08AI6 406 aa2.28□□□□□ -2.04
SMCHD1-202ENST00000577300 CATR1Q13166 79 aa2.28□□□□□ -2.04
SMCHD1-202ENST00000577300 LRRC10Q5BKY1 277 aa2.28□□□□□ -2.04
SMCHD1-202ENST00000577300 RASL11AQ6T310 242 aa2.28□□□□□ -2.04
SMCHD1-202ENST00000577300 TMEM184AQ6ZMB5 413 aa2.28□□□□□ -2.04
SMCHD1-202ENST00000577300 GTF2H5Q6ZYL4 71 aa2.28□□□□□ -2.04
SMCHD1-202ENST00000577300 SLC35F2Q8IXU6 374 aa2.28□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms