RNA–Protein interactions for RNA: ENST00000576940.1

NPLOC4-220, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 5

Gene NPLOC4, Length 216 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-220ENST00000576940 ZNF367Q7RTV3 350 aa7.47□□□□□ -1.21
NPLOC4-220ENST00000576940 FAM89BQ8N5H3 189 aa7.47□□□□□ -1.21
NPLOC4-220ENST00000576940 TMEM217Q8N7C4 229 aa7.47□□□□□ -1.21
NPLOC4-220ENST00000576940 FANCD2OSQ96PS1 177 aa7.47□□□□□ -1.21
NPLOC4-220ENST00000576940 CMSS1Q9BQ75 279 aaKnown RBP7.47□□□□□ -1.21
NPLOC4-220ENST00000576940 PECRQ9BY49 303 aa7.47□□□□□ -1.21
NPLOC4-220ENST00000576940 FBXL17Q9UF56 701 aa7.47□□□□□ -1.21
NPLOC4-220ENST00000576940 RSL24D1Q9UHA3 163 aaKnown RBP7.47□□□□□ -1.21
NPLOC4-220ENST00000576940 LSM2Q9Y333 95 aaKnown RBP7.47□□□□□ -1.21
NPLOC4-220ENST00000576940 MUC4Q99102 2169 aa7.47□□□□□ -1.21
NPLOC4-220ENST00000576940 TRAV25A0A0B4J276 109 aa7.46□□□□□ -1.22
NPLOC4-220ENST00000576940 IGHV3-35A0A0C4DH35 117 aa7.46□□□□□ -1.22
NPLOC4-220ENST00000576940 A8MWP6 167 aa7.46□□□□□ -1.22
NPLOC4-220ENST00000576940 TEX22C9J3V5 150 aa7.46□□□□□ -1.22
NPLOC4-220ENST00000576940 J3QRK9 145 aa7.46□□□□□ -1.22
NPLOC4-220ENST00000576940 FABP7O15540 132 aa7.46□□□□□ -1.22
NPLOC4-220ENST00000576940 CLEC3BP05452 202 aa7.46□□□□□ -1.22
NPLOC4-220ENST00000576940 IL6RP08887 468 aaPredicted RBP7.46□□□□□ -1.22
NPLOC4-220ENST00000576940 SAA1P0DJI8 122 aaPredicted RBP7.46□□□□□ -1.22
NPLOC4-220ENST00000576940 C8orf88P0DMB2 117 aa7.46□□□□□ -1.22
NPLOC4-220ENST00000576940 P2RY14Q15391 338 aa7.46□□□□□ -1.22
NPLOC4-220ENST00000576940 PLAC9Q5JTB6 97 aa7.46□□□□□ -1.22
NPLOC4-220ENST00000576940 AHSA2Q719I0 299 aa7.46□□□□□ -1.22
NPLOC4-220ENST00000576940 SLC38A6Q8IZM9 456 aa7.46□□□□□ -1.22
NPLOC4-220ENST00000576940 VKORC1L1Q8N0U8 176 aa7.46□□□□□ -1.22
NPLOC4-220ENST00000576940 OR6M1Q8NGM8 313 aa7.46□□□□□ -1.22
NPLOC4-220ENST00000576940 OR4A4PQ8NGN8 299 aa7.46□□□□□ -1.22
NPLOC4-220ENST00000576940 YIPF6Q96EC8 236 aa7.46□□□□□ -1.22
NPLOC4-220ENST00000576940 FYTTD1Q96QD9 318 aaKnown RBP7.46□□□□□ -1.22
NPLOC4-220ENST00000576940 DCUN1D5Q9BTE7 237 aa7.46□□□□□ -1.22
NPLOC4-220ENST00000576940 URM1Q9BTM9 101 aaKnown RBP7.46□□□□□ -1.22
NPLOC4-220ENST00000576940 KRTAP4-5Q9BYR2 181 aa7.46□□□□□ -1.22
NPLOC4-220ENST00000576940 C12orf4Q9NQ89 552 aa7.46□□□□□ -1.22
NPLOC4-220ENST00000576940 HSF4Q9ULV5 492 aa7.46□□□□□ -1.22
NPLOC4-220ENST00000576940 ZNF257Q9Y2Q1 563 aa7.46□□□□□ -1.22
NPLOC4-220ENST00000576940 RBM7Q9Y580 266 aaKnown RBP7.46□□□□□ -1.22
NPLOC4-220ENST00000576940 TRBV6-7A0A0A0MS04 114 aa7.45□□□□□ -1.22
NPLOC4-220ENST00000576940 KIR2DL5BA0A0G2JN68 375 aa7.45□□□□□ -1.22
NPLOC4-220ENST00000576940 KIR2DL5BA0A0G2JPC4 375 aa7.45□□□□□ -1.22
NPLOC4-220ENST00000576940 A0A1B0GW64 132 aa7.45□□□□□ -1.22
NPLOC4-220ENST00000576940 PTGES3LE9PB15 166 aa7.45□□□□□ -1.22
NPLOC4-220ENST00000576940 XRCC3O43542 346 aa7.45□□□□□ -1.22
NPLOC4-220ENST00000576940 S1PR2O95136 353 aa7.45□□□□□ -1.22
NPLOC4-220ENST00000576940 BPNT1O95861 308 aa7.45□□□□□ -1.22
NPLOC4-220ENST00000576940 IFNA4P05014 189 aa7.45□□□□□ -1.22
NPLOC4-220ENST00000576940 CD1AP06126 327 aa7.45□□□□□ -1.22
NPLOC4-220ENST00000576940 MED14OSP0DP75 135 aa7.45□□□□□ -1.22
NPLOC4-220ENST00000576940 CD37P11049 281 aa7.45□□□□□ -1.22
NPLOC4-220ENST00000576940 GALP22466 123 aa7.45□□□□□ -1.22
NPLOC4-220ENST00000576940 MAPK3P27361 379 aaPredicted RBP7.45□□□□□ -1.22
NPLOC4-220ENST00000576940 SERPINB10P48595 397 aa7.45□□□□□ -1.22
NPLOC4-220ENST00000576940 TAS2R43P59537 309 aa7.45□□□□□ -1.22
NPLOC4-220ENST00000576940 TPBGQ13641 420 aa7.45□□□□□ -1.22
NPLOC4-220ENST00000576940 CDK10Q15131 360 aa7.45□□□□□ -1.22
NPLOC4-220ENST00000576940 CNPY1Q3B7I2 92 aa7.45□□□□□ -1.22
NPLOC4-220ENST00000576940 OR4A47Q6IF82 309 aa7.45□□□□□ -1.22
NPLOC4-220ENST00000576940 SLC25A42Q86VD7 318 aa7.45□□□□□ -1.22
NPLOC4-220ENST00000576940 MMD2Q8IY49 270 aa7.45□□□□□ -1.22
NPLOC4-220ENST00000576940 KIR2DL5AQ8N109 375 aa7.45□□□□□ -1.22
NPLOC4-220ENST00000576940 NANOGP1Q8N7R0 232 aa7.45□□□□□ -1.22
NPLOC4-220ENST00000576940 OR5B3Q8NH48 314 aa7.45□□□□□ -1.22
NPLOC4-220ENST00000576940 OR10J5Q8NHC4 309 aa7.45□□□□□ -1.22
NPLOC4-220ENST00000576940 KIR2DL5BQ8NHK3 375 aa7.45□□□□□ -1.22
NPLOC4-220ENST00000576940 C11orf45Q8TAV5 145 aa7.45□□□□□ -1.22
NPLOC4-220ENST00000576940 OSR1Q8TAX0 266 aaPredicted RBP7.45□□□□□ -1.22
NPLOC4-220ENST00000576940 MAFIPQ8WZ33 124 aa7.45□□□□□ -1.22
NPLOC4-220ENST00000576940 EEF1AKMT3Q96AZ1 226 aa7.45□□□□□ -1.22
NPLOC4-220ENST00000576940 MND1Q9BWT6 205 aa7.45□□□□□ -1.22
NPLOC4-220ENST00000576940 MAP6D1Q9H9H5 199 aa7.45□□□□□ -1.22
NPLOC4-220ENST00000576940 MRPL27Q9P0M9 148 aaKnown RBP7.45□□□□□ -1.22
NPLOC4-220ENST00000576940 A0A1B0GVY2 172 aa7.44□□□□□ -1.22
NPLOC4-220ENST00000576940 NPIPB5A8MRT5 1133 aa7.44□□□□□ -1.22
NPLOC4-220ENST00000576940 H3BMQ9 156 aa7.44□□□□□ -1.22
NPLOC4-220ENST00000576940 RAB27BO00194 218 aa7.44□□□□□ -1.22
NPLOC4-220ENST00000576940 DEFB4AO15263 64 aa7.44□□□□□ -1.22
NPLOC4-220ENST00000576940 FCGR3BO75015 233 aa7.44□□□□□ -1.22
NPLOC4-220ENST00000576940 CRYGCP07315 174 aa7.44□□□□□ -1.22
NPLOC4-220ENST00000576940 MYOD1P15172 320 aa7.44□□□□□ -1.22
NPLOC4-220ENST00000576940 AREGP15514 252 aa7.44□□□□□ -1.22
NPLOC4-220ENST00000576940 RPA2P15927 270 aa7.44□□□□□ -1.22
NPLOC4-220ENST00000576940 MAP2K4P45985 399 aa7.44□□□□□ -1.22
NPLOC4-220ENST00000576940 MLLT11Q13015 90 aaPredicted RBP7.44□□□□□ -1.22
NPLOC4-220ENST00000576940 RBMS2Q15434 407 aaKnown RBP7.44□□□□□ -1.22
NPLOC4-220ENST00000576940 ZNF124Q15973 351 aa7.44□□□□□ -1.22
NPLOC4-220ENST00000576940 CTF1Q16619 201 aa7.44□□□□□ -1.22
NPLOC4-220ENST00000576940 ODF3L2Q3SX64 289 aa7.44□□□□□ -1.22
NPLOC4-220ENST00000576940 TIMM50Q3ZCQ8 353 aa7.44□□□□□ -1.22
NPLOC4-220ENST00000576940 C2CD4CQ8TF44 421 aa7.44□□□□□ -1.22
NPLOC4-220ENST00000576940 GFI1Q99684 422 aa7.44□□□□□ -1.22
NPLOC4-220ENST00000576940 RARRES2Q99969 163 aa7.44□□□□□ -1.22
NPLOC4-220ENST00000576940 OR51E2Q9H255 320 aa7.44□□□□□ -1.22
NPLOC4-220ENST00000576940 C5orf66Q9H5L9 145 aa7.44□□□□□ -1.22
NPLOC4-220ENST00000576940 SLC2A9Q9NRM0 540 aa7.44□□□□□ -1.22
NPLOC4-220ENST00000576940 APLNQ9ULZ1 77 aa7.44□□□□□ -1.22
NPLOC4-220ENST00000576940 KCNK7Q9Y2U2 307 aa7.44□□□□□ -1.22
NPLOC4-220ENST00000576940 MFSD2BA6NFX1 497 aa7.43□□□□□ -1.22
NPLOC4-220ENST00000576940 IGLL5B9A064 214 aa7.43□□□□□ -1.22
NPLOC4-220ENST00000576940 TSPAN4O14817 238 aa7.43□□□□□ -1.22
NPLOC4-220ENST00000576940 REG1AP05451 166 aa7.43□□□□□ -1.22
NPLOC4-220ENST00000576940 PSMB6P28072 239 aa7.43□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms