RNA–Protein interactions for RNA: ENST00000576708.5

NUP88-212, Transcript of nucleoporin 88, humanhuman

TSL 5

Gene NUP88, Length 800 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-212ENST00000576708 INSL3P51460 131 aa4.76□□□□□ -1.65
NUP88-212ENST00000576708 CRIP2P52943 208 aaPredicted RBP4.76□□□□□ -1.65
NUP88-212ENST00000576708 POLR2GP62487 172 aaKnown RBP eCLIP4.76□□□□□ -1.65
NUP88-212ENST00000576708 SSBP2P81877 361 aaPredicted RBP4.76□□□□□ -1.65
NUP88-212ENST00000576708 PITPNAQ00169 270 aa4.76□□□□□ -1.65
NUP88-212ENST00000576708 PJVKQ0ZLH3 352 aa4.76□□□□□ -1.65
NUP88-212ENST00000576708 IRF3Q14653 427 aa4.76□□□□□ -1.65
NUP88-212ENST00000576708 SPHARQ15513 63 aa4.76□□□□□ -1.65
NUP88-212ENST00000576708 ACTBL2Q562R1 376 aa4.76□□□□□ -1.65
NUP88-212ENST00000576708 FAM71F2Q6NXP2 309 aa4.76□□□□□ -1.65
NUP88-212ENST00000576708 ACSM6Q6P461 480 aa4.76□□□□□ -1.65
NUP88-212ENST00000576708 CD200R1LQ6Q8B3 271 aa4.76□□□□□ -1.65
NUP88-212ENST00000576708 OR6M1Q8NGM8 313 aa4.76□□□□□ -1.65
NUP88-212ENST00000576708 GRPEL2Q8TAA5 225 aa4.76□□□□□ -1.65
NUP88-212ENST00000576708 MUC7Q8TAX7 377 aa4.76□□□□□ -1.65
NUP88-212ENST00000576708 MAFIPQ8WZ33 124 aa4.76□□□□□ -1.65
NUP88-212ENST00000576708 THRSPQ92748 146 aa4.76□□□□□ -1.65
NUP88-212ENST00000576708 C5orf30Q96GV9 206 aa4.76□□□□□ -1.65
NUP88-212ENST00000576708 ABHD1Q96SE0 405 aa4.76□□□□□ -1.65
NUP88-212ENST00000576708 MND1Q9BWT6 205 aa4.76□□□□□ -1.65
NUP88-212ENST00000576708 PECRQ9BY49 303 aa4.76□□□□□ -1.65
NUP88-212ENST00000576708 PLGRKTQ9HBL7 147 aa4.76□□□□□ -1.65
NUP88-212ENST00000576708 C8orf4Q9NR00 106 aa4.76□□□□□ -1.65
NUP88-212ENST00000576708 ZNF355PQ9NSJ1 428 aa4.76□□□□□ -1.65
NUP88-212ENST00000576708 SLC17A2O00624 439 aa4.75□□□□□ -1.65
NUP88-212ENST00000576708 ITGB1BP1O14713 200 aa4.75□□□□□ -1.65
NUP88-212ENST00000576708 RBMXL2O75526 392 aaKnown RBP4.75□□□□□ -1.65
NUP88-212ENST00000576708 RBBP9O75884 186 aa4.75□□□□□ -1.65
NUP88-212ENST00000576708 IGLV2-23P01705 113 aa4.75□□□□□ -1.65
NUP88-212ENST00000576708 APELAP0DMC3 54 aa4.75□□□□□ -1.65
NUP88-212ENST00000576708 ARSBP15848 533 aa4.75□□□□□ -1.65
NUP88-212ENST00000576708 ZBTB25P24278 435 aa4.75□□□□□ -1.65
NUP88-212ENST00000576708 MAP2K4P45985 399 aa4.75□□□□□ -1.65
NUP88-212ENST00000576708 VBP1P61758 197 aa4.75□□□□□ -1.65
NUP88-212ENST00000576708 FABP5Q01469 135 aa4.75□□□□□ -1.65
NUP88-212ENST00000576708 TMEM267Q0VDI3 215 aaPredicted RBP4.75□□□□□ -1.65
NUP88-212ENST00000576708 FXYD3Q14802 87 aa4.75□□□□□ -1.65
NUP88-212ENST00000576708 RAB11BQ15907 218 aa4.75□□□□□ -1.65
NUP88-212ENST00000576708 MOGAT2Q3SYC2 334 aa4.75□□□□□ -1.65
NUP88-212ENST00000576708 AKIRIN2Q53H80 203 aa4.75□□□□□ -1.65
NUP88-212ENST00000576708 CASC10Q5T4H9 136 aa4.75□□□□□ -1.65
NUP88-212ENST00000576708 HES5Q5TA89 166 aa4.75□□□□□ -1.65
NUP88-212ENST00000576708 RNLSQ5VYX0 342 aa4.75□□□□□ -1.65
NUP88-212ENST00000576708 SUMO4Q6EEV6 95 aa4.75□□□□□ -1.65
NUP88-212ENST00000576708 ZFAND6Q6FIF0 208 aa4.75□□□□□ -1.65
NUP88-212ENST00000576708 ZNF562Q6V9R5 426 aa4.75□□□□□ -1.65
NUP88-212ENST00000576708 MOB1BQ7L9L4 216 aa4.75□□□□□ -1.65
NUP88-212ENST00000576708 FAM89BQ8N5H3 189 aa4.75□□□□□ -1.65
NUP88-212ENST00000576708 OR6Q1Q8NGQ2 317 aa4.75□□□□□ -1.65
NUP88-212ENST00000576708 UFD1Q92890 307 aa4.75□□□□□ -1.65
NUP88-212ENST00000576708 FLYWCH2Q96CP2 140 aaKnown RBP4.75□□□□□ -1.65
NUP88-212ENST00000576708 CMSS1Q9BQ75 279 aaKnown RBP4.75□□□□□ -1.65
NUP88-212ENST00000576708 URM1Q9BTM9 101 aaKnown RBP4.75□□□□□ -1.65
NUP88-212ENST00000576708 RDH8Q9NYR8 311 aa4.75□□□□□ -1.65
NUP88-212ENST00000576708 ZNF221Q9UK13 617 aa4.75□□□□□ -1.65
NUP88-212ENST00000576708 STARD9Q9P2P6 4700 aa4.74□□□□□ -1.65
NUP88-212ENST00000576708 EPPK1P58107 5090 aaKnown RBP4.74□□□□□ -1.65
NUP88-212ENST00000576708 A0A075B6Q4 140 aa4.74□□□□□ -1.65
NUP88-212ENST00000576708 TMEM272A0A1B0GTI8 110 aa4.74□□□□□ -1.65
NUP88-212ENST00000576708 SRRM4A7MD48 611 aaKnown RBP4.74□□□□□ -1.65
NUP88-212ENST00000576708 TRDCB7Z8K6 153 aa4.74□□□□□ -1.65
NUP88-212ENST00000576708 J3QRK9 145 aa4.74□□□□□ -1.65
NUP88-212ENST00000576708 BET1O15155 118 aa4.74□□□□□ -1.65
NUP88-212ENST00000576708 LDLRAD4O15165 306 aa4.74□□□□□ -1.65
NUP88-212ENST00000576708 CNIH1O95406 144 aa4.74□□□□□ -1.65
NUP88-212ENST00000576708 TRBV12-3P01733 135 aa4.74□□□□□ -1.65
NUP88-212ENST00000576708 TFAP2AP05549 437 aa4.74□□□□□ -1.65
NUP88-212ENST00000576708 CRYGBP07316 175 aa4.74□□□□□ -1.65
NUP88-212ENST00000576708 OR8U9P0C7N5 309 aa4.74□□□□□ -1.65
NUP88-212ENST00000576708 GSTT2P0CG29 244 aa4.74□□□□□ -1.65
NUP88-212ENST00000576708 GSTT2BP0CG30 244 aa4.74□□□□□ -1.65
NUP88-212ENST00000576708 IGHV4-30-4P0DP06 118 aa4.74□□□□□ -1.65
NUP88-212ENST00000576708 NUP62P37198 522 aaPredicted RBP4.74□□□□□ -1.65
NUP88-212ENST00000576708 AQP4P55087 323 aa4.74□□□□□ -1.65
NUP88-212ENST00000576708 OR10A3P58181 314 aa4.74□□□□□ -1.65
NUP88-212ENST00000576708 RPP30P78346 268 aaKnown RBP4.74□□□□□ -1.65
NUP88-212ENST00000576708 TPBGQ13641 420 aa4.74□□□□□ -1.65
NUP88-212ENST00000576708 MRGPRG-AS1Q2M3A8 158 aa4.74□□□□□ -1.65
NUP88-212ENST00000576708 IL34Q6ZMJ4 242 aa4.74□□□□□ -1.65
NUP88-212ENST00000576708 TPRA1Q86W33 373 aa4.74□□□□□ -1.65
NUP88-212ENST00000576708 PDPNQ86YL7 162 aa4.74□□□□□ -1.65
NUP88-212ENST00000576708 TCTEX1D1Q8N7M0 179 aa4.74□□□□□ -1.65
NUP88-212ENST00000576708 POC5Q8NA72 575 aa4.74□□□□□ -1.65
NUP88-212ENST00000576708 PTX4Q96A99 478 aa4.74□□□□□ -1.65
NUP88-212ENST00000576708 FAM3DQ96BQ1 224 aa4.74□□□□□ -1.65
NUP88-212ENST00000576708 OR4C12Q96R67 309 aa4.74□□□□□ -1.65
NUP88-212ENST00000576708 TSNAXQ99598 290 aaKnown RBP4.74□□□□□ -1.65
NUP88-212ENST00000576708 RNF5Q99942 180 aa4.74□□□□□ -1.65
NUP88-212ENST00000576708 CCDC90BQ9GZT6 254 aa4.74□□□□□ -1.65
NUP88-212ENST00000576708 SLC5A7Q9GZV3 580 aa4.74□□□□□ -1.65
NUP88-212ENST00000576708 OR2D2Q9H210 308 aa4.74□□□□□ -1.65
NUP88-212ENST00000576708 RIMS4Q9H426 269 aaPredicted RBP4.74□□□□□ -1.65
NUP88-212ENST00000576708 DUSP21Q9H596 190 aa4.74□□□□□ -1.65
NUP88-212ENST00000576708 PALMDQ9NP74 551 aa4.74□□□□□ -1.65
NUP88-212ENST00000576708 C12orf4Q9NQ89 552 aa4.74□□□□□ -1.65
NUP88-212ENST00000576708 SDHAF2Q9NX18 166 aa4.74□□□□□ -1.65
NUP88-212ENST00000576708 SCN3BQ9NY72 215 aa4.74□□□□□ -1.65
NUP88-212ENST00000576708 ZNF230Q9UIE0 474 aaPredicted RBP4.74□□□□□ -1.65
NUP88-212ENST00000576708 ELF5Q9UKW6 265 aaPredicted RBP4.74□□□□□ -1.65
NUP88-212ENST00000576708 HSF4Q9ULV5 492 aa4.74□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms