RNA–Protein interactions for RNA: ENST00000576033.5

CCDC40-215, Transcript of coiled-coil domain containing 40, humanhuman

TSL 4

Gene CCDC40, Length 466 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-215ENST00000576033 B3GALNT1O75752 331 aa6.26□□□□□ -1.41
CCDC40-215ENST00000576033 TSPAN9O75954 239 aa6.26□□□□□ -1.41
CCDC40-215ENST00000576033 MPC2O95563 127 aa6.26□□□□□ -1.41
CCDC40-215ENST00000576033 OR5AC1P0C628 307 aa6.26□□□□□ -1.41
CCDC40-215ENST00000576033 UCP1P25874 307 aa6.26□□□□□ -1.41
CCDC40-215ENST00000576033 BRS3P32247 399 aa6.26□□□□□ -1.41
CCDC40-215ENST00000576033 COMPP49747 757 aaPredicted RBP6.26□□□□□ -1.41
CCDC40-215ENST00000576033 PHLDA2Q53GA4 152 aa6.26□□□□□ -1.41
CCDC40-215ENST00000576033 CCDC144NLQ6NUI1 221 aa6.26□□□□□ -1.41
CCDC40-215ENST00000576033 C11orf87Q6NUJ2 197 aa6.26□□□□□ -1.41
CCDC40-215ENST00000576033 GSG1LQ6UXU4 331 aa6.26□□□□□ -1.41
CCDC40-215ENST00000576033 ZNF818PQ6ZRF7 136 aa6.26□□□□□ -1.41
CCDC40-215ENST00000576033 LCNL1Q6ZST4 164 aa6.26□□□□□ -1.41
CCDC40-215ENST00000576033 KLHDC1Q8N7A1 406 aa6.26□□□□□ -1.41
CCDC40-215ENST00000576033 OR4C13Q8NGP0 309 aa6.26□□□□□ -1.41
CCDC40-215ENST00000576033 OR4F5Q8NH21 305 aa6.26□□□□□ -1.41
CCDC40-215ENST00000576033 SPATA3Q8NHX4 192 aa6.26□□□□□ -1.41
CCDC40-215ENST00000576033 LHFPL5Q8TAF8 219 aa6.26□□□□□ -1.41
CCDC40-215ENST00000576033 PPP1R1CQ8WVI7 109 aa6.26□□□□□ -1.41
CCDC40-215ENST00000576033 SECTM1Q8WVN6 248 aa6.26□□□□□ -1.41
CCDC40-215ENST00000576033 EDARADDQ8WWZ3 215 aa6.26□□□□□ -1.41
CCDC40-215ENST00000576033 IL22RA2Q969J5 263 aa6.26□□□□□ -1.41
CCDC40-215ENST00000576033 AKR1E2Q96JD6 320 aa6.26□□□□□ -1.41
CCDC40-215ENST00000576033 OR10C1Q96KK4 312 aa6.26□□□□□ -1.41
CCDC40-215ENST00000576033 C2orf50Q96LR7 162 aa6.26□□□□□ -1.41
CCDC40-215ENST00000576033 TP53RKQ96S44 253 aa6.26□□□□□ -1.41
CCDC40-215ENST00000576033 RNF126Q9BV68 326 aa6.26□□□□□ -1.41
CCDC40-215ENST00000576033 SLC5A7Q9GZV3 580 aa6.26□□□□□ -1.41
CCDC40-215ENST00000576033 TMEM222Q9H0R3 208 aa6.26□□□□□ -1.41
CCDC40-215ENST00000576033 RAB9BQ9NP90 201 aa6.26□□□□□ -1.41
CCDC40-215ENST00000576033 PRR13Q9NZ81 148 aa6.26□□□□□ -1.41
CCDC40-215ENST00000576033 GAB2Q9UQC2 676 aa6.26□□□□□ -1.41
CCDC40-215ENST00000576033 KCNIP3Q9Y2W7 256 aa6.26□□□□□ -1.41
CCDC40-215ENST00000576033 FBXO7Q9Y3I1 522 aa6.26□□□□□ -1.41
CCDC40-215ENST00000576033 RNF114Q9Y508 228 aa6.26□□□□□ -1.41
CCDC40-215ENST00000576033 RBM7Q9Y580 266 aaKnown RBP6.26□□□□□ -1.41
CCDC40-215ENST00000576033 TEX13DA0A0J9YY54 714 aaPredicted RBP6.25□□□□□ -1.41
CCDC40-215ENST00000576033 C3orf85A0A1B0GTC6 90 aa6.25□□□□□ -1.41
CCDC40-215ENST00000576033 DUXBA0A1W2PPF3 345 aa6.25□□□□□ -1.41
CCDC40-215ENST00000576033 RNF222A6NCQ9 220 aa6.25□□□□□ -1.41
CCDC40-215ENST00000576033 SRRM4A7MD48 611 aaKnown RBP6.25□□□□□ -1.41
CCDC40-215ENST00000576033 H0Y980 276 aa6.25□□□□□ -1.41
CCDC40-215ENST00000576033 H0YIZ8 118 aa6.25□□□□□ -1.41
CCDC40-215ENST00000576033 H7C2Y5 167 aa6.25□□□□□ -1.41
CCDC40-215ENST00000576033 ITGB1BP1O14713 200 aa6.25□□□□□ -1.41
CCDC40-215ENST00000576033 PGLYRP1O75594 196 aaPredicted RBP6.25□□□□□ -1.41
CCDC40-215ENST00000576033 CDS2O95674 445 aa6.25□□□□□ -1.41
CCDC40-215ENST00000576033 MOSP00540 346 aa6.25□□□□□ -1.41
CCDC40-215ENST00000576033 FAM106CPP0CH98 169 aa6.25□□□□□ -1.41
CCDC40-215ENST00000576033 CD28P10747 220 aa6.25□□□□□ -1.41
CCDC40-215ENST00000576033 CD1BP29016 333 aa6.25□□□□□ -1.41
CCDC40-215ENST00000576033 DUTP33316 252 aaKnown RBP6.25□□□□□ -1.41
CCDC40-215ENST00000576033 VDAC2P45880 294 aaPredicted RBP6.25□□□□□ -1.41
CCDC40-215ENST00000576033 BRWD1-AS2P59051 145 aa6.25□□□□□ -1.41
CCDC40-215ENST00000576033 SRPXP78539 464 aa6.25□□□□□ -1.41
CCDC40-215ENST00000576033 OR2F1Q13607 317 aa6.25□□□□□ -1.41
CCDC40-215ENST00000576033 EBI3Q14213 229 aa6.25□□□□□ -1.41
CCDC40-215ENST00000576033 MMDQ15546 238 aa6.25□□□□□ -1.41
CCDC40-215ENST00000576033 GGNBP1Q5YKI7 109 aa6.25□□□□□ -1.41
CCDC40-215ENST00000576033 ZNF767PQ75MW2 155 aa6.25□□□□□ -1.41
CCDC40-215ENST00000576033 TBC1D26Q86UD7 250 aa6.25□□□□□ -1.41
CCDC40-215ENST00000576033 VKORC1L1Q8N0U8 176 aa6.25□□□□□ -1.41
CCDC40-215ENST00000576033 LGI3Q8N145 548 aa6.25□□□□□ -1.41
CCDC40-215ENST00000576033 KCNRGQ8N5I3 272 aa6.25□□□□□ -1.41
CCDC40-215ENST00000576033 FAM71E2Q8N5Q1 922 aa6.25□□□□□ -1.41
CCDC40-215ENST00000576033 ZNF645Q8N7E2 425 aa6.25□□□□□ -1.41
CCDC40-215ENST00000576033 OR5AN1Q8NGI8 311 aa6.25□□□□□ -1.41
CCDC40-215ENST00000576033 OR2T10Q8NGZ9 312 aa6.25□□□□□ -1.41
CCDC40-215ENST00000576033 DDB2Q92466 427 aa6.25□□□□□ -1.41
CCDC40-215ENST00000576033 CLCC1Q96S66 551 aa6.25□□□□□ -1.41
CCDC40-215ENST00000576033 S1PR3Q99500 378 aa6.25□□□□□ -1.41
CCDC40-215ENST00000576033 NPFFR1Q9GZQ6 430 aa6.25□□□□□ -1.41
CCDC40-215ENST00000576033 FBXL15Q9H469 300 aa6.25□□□□□ -1.41
CCDC40-215ENST00000576033 C16orf95Q9H693 158 aa6.25□□□□□ -1.41
CCDC40-215ENST00000576033 PITPNC1Q9UKF7 332 aa6.25□□□□□ -1.41
CCDC40-215ENST00000576033 FXYD6-FXYD2A0A087WZ82 144 aa6.24□□□□□ -1.41
CCDC40-215ENST00000576033 L7N2F9 121 aa6.24□□□□□ -1.41
CCDC40-215ENST00000576033 FCN1O00602 326 aa6.24□□□□□ -1.41
CCDC40-215ENST00000576033 ARPC5O15511 151 aa6.24□□□□□ -1.41
CCDC40-215ENST00000576033 TXNL1O43396 289 aa6.24□□□□□ -1.41
CCDC40-215ENST00000576033 RAMP3O60896 148 aa6.24□□□□□ -1.41
CCDC40-215ENST00000576033 IGLV2-23P01705 113 aa6.24□□□□□ -1.41
CCDC40-215ENST00000576033 MYOD1P15172 320 aa6.24□□□□□ -1.41
CCDC40-215ENST00000576033 C4BPBP20851 252 aa6.24□□□□□ -1.41
CCDC40-215ENST00000576033 F2RP25116 425 aa6.24□□□□□ -1.41
CCDC40-215ENST00000576033 PSMB6P28072 239 aa6.24□□□□□ -1.41
CCDC40-215ENST00000576033 S100A11P31949 105 aa6.24□□□□□ -1.41
CCDC40-215ENST00000576033 LUMP51884 338 aaPredicted RBP6.24□□□□□ -1.41
CCDC40-215ENST00000576033 ARHGDIBP52566 201 aa6.24□□□□□ -1.41
CCDC40-215ENST00000576033 SSBP2P81877 361 aaPredicted RBP6.24□□□□□ -1.41
CCDC40-215ENST00000576033 DEFA5Q01523 94 aa6.24□□□□□ -1.41
CCDC40-215ENST00000576033 PJVKQ0ZLH3 352 aa6.24□□□□□ -1.41
CCDC40-215ENST00000576033 FOXL1Q12952 345 aa6.24□□□□□ -1.41
CCDC40-215ENST00000576033 OPCMLQ14982 345 aa6.24□□□□□ -1.41
CCDC40-215ENST00000576033 MRGPRG-AS1Q2M3A8 158 aa6.24□□□□□ -1.41
CCDC40-215ENST00000576033 SP6Q3SY56 376 aa6.24□□□□□ -1.41
CCDC40-215ENST00000576033 ARSJQ5FYB0 599 aaPredicted RBP6.24□□□□□ -1.41
CCDC40-215ENST00000576033 NMSQ5H8A3 153 aa6.24□□□□□ -1.41
CCDC40-215ENST00000576033 TCTEX1D4Q5JR98 221 aa6.24□□□□□ -1.41
CCDC40-215ENST00000576033 FAM71F2Q6NXP2 309 aa6.24□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms