RNA–Protein interactions for RNA: ENST00000575176.5

SMG6-216, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG6, Length 557 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-216ENST00000575176 CTDSPLO15194 276 aa6.67□□□□□ -1.34
SMG6-216ENST00000575176 PGLYRP1O75594 196 aaPredicted RBP6.67□□□□□ -1.34
SMG6-216ENST00000575176 TRBV12-3P01733 135 aa6.67□□□□□ -1.34
SMG6-216ENST00000575176 CD3DP04234 171 aa6.67□□□□□ -1.34
SMG6-216ENST00000575176 RLN1P04808 185 aa6.67□□□□□ -1.34
SMG6-216ENST00000575176 FGF2P09038 288 aa6.67□□□□□ -1.34
SMG6-216ENST00000575176 APELAP0DMC3 54 aa6.67□□□□□ -1.34
SMG6-216ENST00000575176 CD33P20138 364 aa6.67□□□□□ -1.34
SMG6-216ENST00000575176 HOXD3P31249 432 aaPredicted RBP6.67□□□□□ -1.34
SMG6-216ENST00000575176 SLURP1P55000 103 aa6.67□□□□□ -1.34
SMG6-216ENST00000575176 PLGLAQ15195 96 aa6.67□□□□□ -1.34
SMG6-216ENST00000575176 ZNF79Q15937 498 aa6.67□□□□□ -1.34
SMG6-216ENST00000575176 VMA21Q3ZAQ7 101 aa6.67□□□□□ -1.34
SMG6-216ENST00000575176 RNASE12Q5GAN4 147 aaKnown RBP6.67□□□□□ -1.34
SMG6-216ENST00000575176 PYHIN1Q6K0P9 492 aa6.67□□□□□ -1.34
SMG6-216ENST00000575176 FAAP20Q6NZ36 180 aa6.67□□□□□ -1.34
SMG6-216ENST00000575176 SPAG16Q8N0X2 631 aa6.67□□□□□ -1.34
SMG6-216ENST00000575176 OR11H1Q8NG94 326 aa6.67□□□□□ -1.34
SMG6-216ENST00000575176 OR5H2Q8NGV7 314 aa6.67□□□□□ -1.34
SMG6-216ENST00000575176 OR51H1Q8NH63 302 aa6.67□□□□□ -1.34
SMG6-216ENST00000575176 FANCD2OSQ96PS1 177 aa6.67□□□□□ -1.34
SMG6-216ENST00000575176 OR5B12Q96R08 314 aa6.67□□□□□ -1.34
SMG6-216ENST00000575176 RBM7Q9Y580 266 aaKnown RBP6.67□□□□□ -1.34
SMG6-216ENST00000575176 SORL1Q92673 2214 aa6.66□□□□□ -1.34
SMG6-216ENST00000575176 IGLC7A0M8Q6 106 aa6.66□□□□□ -1.34
SMG6-216ENST00000575176 HMX3A6NHT5 357 aa6.66□□□□□ -1.34
SMG6-216ENST00000575176 GABARAPH6UMI1 98 aa6.66□□□□□ -1.34
SMG6-216ENST00000575176 OR2A4O95047 310 aa6.66□□□□□ -1.34
SMG6-216ENST00000575176 IGHV3-11P01762 117 aa6.66□□□□□ -1.34
SMG6-216ENST00000575176 PRH1P02810 166 aa6.66□□□□□ -1.34
SMG6-216ENST00000575176 CRYGCP07315 174 aa6.66□□□□□ -1.34
SMG6-216ENST00000575176 AREGP15514 252 aa6.66□□□□□ -1.34
SMG6-216ENST00000575176 PTBP1P26599 531 aaKnown RBP eCLIP6.66□□□□□ -1.344e-7■■■■□ 26.4
SMG6-216ENST00000575176 KIR2DS2P43631 304 aa6.66□□□□□ -1.34
SMG6-216ENST00000575176 UCP3P55916 312 aa6.66□□□□□ -1.34
SMG6-216ENST00000575176 TAS2R31P59538 309 aa6.66□□□□□ -1.34
SMG6-216ENST00000575176 OR2B8PP59922 312 aa6.66□□□□□ -1.34
SMG6-216ENST00000575176 ZNF616Q08AN1 781 aa6.66□□□□□ -1.34
SMG6-216ENST00000575176 TNXAQ16473 311 aa6.66□□□□□ -1.34
SMG6-216ENST00000575176 MZT2AQ6P582 158 aa6.66□□□□□ -1.34
SMG6-216ENST00000575176 IL34Q6ZMJ4 242 aa6.66□□□□□ -1.34
SMG6-216ENST00000575176 MMD2Q8IY49 270 aa6.66□□□□□ -1.34
SMG6-216ENST00000575176 CADM3Q8N126 398 aa6.66□□□□□ -1.34
SMG6-216ENST00000575176 OR5T1Q8NG75 326 aa6.66□□□□□ -1.34
SMG6-216ENST00000575176 FCAMRQ8WWV6 532 aa6.66□□□□□ -1.34
SMG6-216ENST00000575176 DLX4Q92988 240 aaPredicted RBP6.66□□□□□ -1.34
SMG6-216ENST00000575176 MS4A10Q96PG2 267 aa6.66□□□□□ -1.34
SMG6-216ENST00000575176 OR2A7Q96R45 310 aa6.66□□□□□ -1.34
SMG6-216ENST00000575176 SLA2Q9H6Q3 261 aa6.66□□□□□ -1.34
SMG6-216ENST00000575176 PLEKHA2Q9HB19 425 aa6.66□□□□□ -1.34
SMG6-216ENST00000575176 TMEM140Q9NV12 185 aa6.66□□□□□ -1.34
SMG6-216ENST00000575176 COMMD9Q9P000 198 aa6.66□□□□□ -1.34
SMG6-216ENST00000575176 MRPS7Q9Y2R9 242 aaKnown RBP6.66□□□□□ -1.34
SMG6-216ENST00000575176 PRELID3BQ9Y3B1 194 aa6.66□□□□□ -1.34
SMG6-216ENST00000575176 STARD9Q9P2P6 4700 aa6.66□□□□□ -1.34
SMG6-216ENST00000575176 MSGN1A6NI15 193 aa6.65□□□□□ -1.34
SMG6-216ENST00000575176 MARCH11A6NNE9 402 aa6.65□□□□□ -1.34
SMG6-216ENST00000575176 NPIPB5A8MRT5 1133 aa6.65□□□□□ -1.34
SMG6-216ENST00000575176 GPR31O00270 319 aa6.65□□□□□ -1.34
SMG6-216ENST00000575176 UPK2O00526 184 aa6.65□□□□□ -1.34
SMG6-216ENST00000575176 GSTZ1O43708 216 aaPredicted RBP6.65□□□□□ -1.34
SMG6-216ENST00000575176 DUS4LO95620 317 aaKnown RBP6.65□□□□□ -1.34
SMG6-216ENST00000575176 HPRT1P00492 218 aa6.65□□□□□ -1.34
SMG6-216ENST00000575176 OR9G9P0C7N8 305 aa6.65□□□□□ -1.34
SMG6-216ENST00000575176 CTRB1P17538 263 aa6.65□□□□□ -1.34
SMG6-216ENST00000575176 TBPP20226 339 aa6.65□□□□□ -1.34
SMG6-216ENST00000575176 F2RP25116 425 aa6.65□□□□□ -1.34
SMG6-216ENST00000575176 MFAP2P55001 183 aa6.65□□□□□ -1.34
SMG6-216ENST00000575176 TPPP2P59282 170 aa6.65□□□□□ -1.34
SMG6-216ENST00000575176 HERV-K104P61576 105 aa6.65□□□□□ -1.34
SMG6-216ENST00000575176 RND3P61587 244 aa6.65□□□□□ -1.34
SMG6-216ENST00000575176 CTRB2Q6GPI1 263 aa6.65□□□□□ -1.34
SMG6-216ENST00000575176 ZNF343Q6P1L6 599 aa6.65□□□□□ -1.34
SMG6-216ENST00000575176 SSX9Q7RTT3 188 aa6.65□□□□□ -1.34
SMG6-216ENST00000575176 ARRDC1Q8N5I2 433 aa6.65□□□□□ -1.34
SMG6-216ENST00000575176 TTC9CQ8N5M4 171 aa6.65□□□□□ -1.34
SMG6-216ENST00000575176 TMEM229BQ8NBD8 167 aa6.65□□□□□ -1.34
SMG6-216ENST00000575176 OR13C8Q8NGS7 320 aa6.65□□□□□ -1.34
SMG6-216ENST00000575176 DCUN1D4Q92564 292 aa6.65□□□□□ -1.34
SMG6-216ENST00000575176 SEC22AQ96IW7 307 aa6.65□□□□□ -1.34
SMG6-216ENST00000575176 CCDC140Q96MF4 163 aa6.65□□□□□ -1.34
SMG6-216ENST00000575176 AKIP1Q9NQ31 210 aa6.65□□□□□ -1.34
SMG6-216ENST00000575176 SLC2A9Q9NRM0 540 aa6.65□□□□□ -1.34
SMG6-216ENST00000575176 FAM212BQ9NTI7 297 aaPredicted RBP6.65□□□□□ -1.34
SMG6-216ENST00000575176 IGLV11-55A0A075B6I3 123 aa6.64□□□□□ -1.35
SMG6-216ENST00000575176 A0A0G2JRQ6 117 aa6.64□□□□□ -1.35
SMG6-216ENST00000575176 ANKRD20A5PA0PJZ0 165 aa6.64□□□□□ -1.35
SMG6-216ENST00000575176 FAM25AB3EWG3 89 aa6.64□□□□□ -1.35
SMG6-216ENST00000575176 FAM25CB3EWG5 89 aa6.64□□□□□ -1.35
SMG6-216ENST00000575176 FAM25GB3EWG6 89 aa6.64□□□□□ -1.35
SMG6-216ENST00000575176 F8W735 103 aaPredicted RBP6.64□□□□□ -1.35
SMG6-216ENST00000575176 ZNF701M0R085 212 aaPredicted RBP6.64□□□□□ -1.35
SMG6-216ENST00000575176 BMPR1BO00238 502 aa6.64□□□□□ -1.35
SMG6-216ENST00000575176 IGKV1-5P01602 117 aa6.64□□□□□ -1.35
SMG6-216ENST00000575176 TRGV3P03979 118 aa6.64□□□□□ -1.35
SMG6-216ENST00000575176 OR8U8P0C7N1 319 aa6.64□□□□□ -1.35
SMG6-216ENST00000575176 NQO2P16083 231 aa6.64□□□□□ -1.35
SMG6-216ENST00000575176 HLA-GP17693 338 aa6.64□□□□□ -1.35
SMG6-216ENST00000575176 PI3P19957 117 aa6.64□□□□□ -1.35
SMG6-216ENST00000575176 TNFSF8P32971 234 aa6.64□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms