RNA–Protein interactions for RNA: ENST00000574022.1

CHD3-217, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 2

Gene CHD3, Length 103 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-217ENST00000574022 A0A1W2PQ67 120 aa1.26□□□□□ -2.21
CHD3-217ENST00000574022 DHRS12A0PJE2 317 aa1.26□□□□□ -2.21
CHD3-217ENST00000574022 TRAPPC13A5PLN9 417 aa1.26□□□□□ -2.21
CHD3-217ENST00000574022 TMEM150BA6NC51 233 aa1.26□□□□□ -2.21
CHD3-217ENST00000574022 DPRXA6NFQ7 191 aa1.26□□□□□ -2.21
CHD3-217ENST00000574022 COLCA2A8K830 154 aa1.26□□□□□ -2.21
CHD3-217ENST00000574022 OR11H12B2RN74 326 aa1.26□□□□□ -2.21
CHD3-217ENST00000574022 G3V2T6 193 aa1.26□□□□□ -2.21
CHD3-217ENST00000574022 RPL36A-HNRNPH2H7BZ11 118 aa1.26□□□□□ -2.21
CHD3-217ENST00000574022 I3L521 148 aa1.26□□□□□ -2.21
CHD3-217ENST00000574022 K7EM74 188 aa1.26□□□□□ -2.21
CHD3-217ENST00000574022 NDUFB2O95178 105 aa1.26□□□□□ -2.21
CHD3-217ENST00000574022 CRHP06850 196 aa1.26□□□□□ -2.21
CHD3-217ENST00000574022 C8GP07360 202 aa1.26□□□□□ -2.21
CHD3-217ENST00000574022 SRP19P09132 144 aaKnown RBP1.26□□□□□ -2.21
CHD3-217ENST00000574022 RBP1P09455 135 aa1.26□□□□□ -2.21
CHD3-217ENST00000574022 ZNF705DP0CH99 300 aaPredicted RBP1.26□□□□□ -2.21
CHD3-217ENST00000574022 IGHV3-30-3P0DP02 117 aa1.26□□□□□ -2.21
CHD3-217ENST00000574022 CPMP14384 443 aa1.26□□□□□ -2.21
CHD3-217ENST00000574022 IDO1P14902 403 aa1.26□□□□□ -2.21
CHD3-217ENST00000574022 CBR1P16152 277 aa1.26□□□□□ -2.21
CHD3-217ENST00000574022 CRHBPP24387 322 aa1.26□□□□□ -2.21
CHD3-217ENST00000574022 BLVRBP30043 206 aaPredicted RBP1.26□□□□□ -2.21
CHD3-217ENST00000574022 RPL27AP46776 148 aaKnown RBP1.26□□□□□ -2.21
CHD3-217ENST00000574022 GABRA2P47869 451 aa1.26□□□□□ -2.21
CHD3-217ENST00000574022 TAS2R20P59543 309 aa1.26□□□□□ -2.21
CHD3-217ENST00000574022 ARPC4P59998 168 aa1.26□□□□□ -2.21
CHD3-217ENST00000574022 DHRS2Q13268 280 aa1.26□□□□□ -2.21
CHD3-217ENST00000574022 LGALS9BQ3B8N2 356 aa1.26□□□□□ -2.21
CHD3-217ENST00000574022 C9orf64Q5T6V5 341 aa1.26□□□□□ -2.21
CHD3-217ENST00000574022 KPRPQ5T749 579 aaPredicted RBP1.26□□□□□ -2.21
CHD3-217ENST00000574022 LGALS9CQ6DKI2 356 aa1.26□□□□□ -2.21
CHD3-217ENST00000574022 WDR59Q6PJI9 974 aa1.26□□□□□ -2.21
CHD3-217ENST00000574022 SPINT4Q6UDR6 99 aa1.26□□□□□ -2.21
CHD3-217ENST00000574022 SDIM1Q6ZPB5 146 aa1.26□□□□□ -2.21
CHD3-217ENST00000574022 SSX8Q7RTT4 187 aa1.26□□□□□ -2.21
CHD3-217ENST00000574022 SPATA12Q7Z6I5 190 aa1.26□□□□□ -2.21
CHD3-217ENST00000574022 PACRGLQ8N7B6 248 aa1.26□□□□□ -2.21
CHD3-217ENST00000574022 OR11H6Q8NGC7 330 aa1.26□□□□□ -2.21
CHD3-217ENST00000574022 OR13C8Q8NGS7 320 aa1.26□□□□□ -2.21
CHD3-217ENST00000574022 OR11H2Q8NH07 326 aa1.26□□□□□ -2.21
CHD3-217ENST00000574022 PYDC1Q8WXC3 89 aa1.26□□□□□ -2.21
CHD3-217ENST00000574022 DDA1Q9BW61 102 aa1.26□□□□□ -2.21
CHD3-217ENST00000574022 TMEM222Q9H0R3 208 aa1.26□□□□□ -2.21
CHD3-217ENST00000574022 C19orf12Q9NSK7 152 aa1.26□□□□□ -2.21
CHD3-217ENST00000574022 SS18L2Q9UHA2 77 aa1.26□□□□□ -2.21
CHD3-217ENST00000574022 ZNF443Q9Y2A4 671 aaPredicted RBP1.26□□□□□ -2.21
CHD3-217ENST00000574022 SLC35A3Q9Y2D2 325 aa1.26□□□□□ -2.21
CHD3-217ENST00000574022 ZNF835Q9Y2P0 537 aa1.26□□□□□ -2.21
CHD3-217ENST00000574022 MYO10Q9HD67 2058 aa1.26□□□□□ -2.21
CHD3-217ENST00000574022 CROCCQ5TZA2 2017 aa1.26□□□□□ -2.21
CHD3-217ENST00000574022 NUP205Q92621 2012 aa1.26□□□□□ -2.21
CHD3-217ENST00000574022 KIF1BO60333 1816 aa1.26□□□□□ -2.21
CHD3-217ENST00000574022 COL18A1P39060 1754 aa1.26□□□□□ -2.21
CHD3-217ENST00000574022 TNKS1BP1Q9C0C2 1729 aaKnown RBP1.26□□□□□ -2.21
CHD3-217ENST00000574022 COL16A1Q07092 1604 aaPredicted RBP1.26□□□□□ -2.21
CHD3-217ENST00000574022 NACAE9PAV3 2078 aa1.25□□□□□ -2.21
CHD3-217ENST00000574022 SPATA31E1Q6ZUB1 1445 aa1.25□□□□□ -2.21
CHD3-217ENST00000574022 YTHDC2Q9H6S0 1430 aaKnown RBP1.25□□□□□ -2.21
CHD3-217ENST00000574022 ATRXP46100 2492 aa1.25□□□□□ -2.21
CHD3-217ENST00000574022 ABCC12Q96J65 1359 aa1.25□□□□□ -2.21
CHD3-217ENST00000574022 IGKV2-28A0A075B6P5 120 aa1.25□□□□□ -2.21
CHD3-217ENST00000574022 TRAV9-1A0A075B6T8 112 aa1.25□□□□□ -2.21
CHD3-217ENST00000574022 TMEM269A0A1B0GVZ9 245 aa1.25□□□□□ -2.21
CHD3-217ENST00000574022 GRIFINA4D1Z8 144 aa1.25□□□□□ -2.21
CHD3-217ENST00000574022 GGTLC3B5MD39 225 aa1.25□□□□□ -2.21
CHD3-217ENST00000574022 GPR31O00270 319 aa1.25□□□□□ -2.21
CHD3-217ENST00000574022 UBFD1O14562 309 aaKnown RBP1.25□□□□□ -2.21
CHD3-217ENST00000574022 LY6HO94772 140 aa1.25□□□□□ -2.21
CHD3-217ENST00000574022 ZNF682O95780 498 aa1.25□□□□□ -2.21
CHD3-217ENST00000574022 IGKV2D-28P01615 120 aa1.25□□□□□ -2.21
CHD3-217ENST00000574022 ZNF286BP0CG31 522 aa1.25□□□□□ -2.21
CHD3-217ENST00000574022 CCL3P10147 92 aa1.25□□□□□ -2.21
CHD3-217ENST00000574022 SPI1P17947 270 aa1.25□□□□□ -2.21
CHD3-217ENST00000574022 PPIBP23284 216 aaKnown RBP1.25□□□□□ -2.21
CHD3-217ENST00000574022 HIST1H2BOP23527 126 aa1.25□□□□□ -2.21
CHD3-217ENST00000574022 S100A7P31151 101 aa1.25□□□□□ -2.21
CHD3-217ENST00000574022 HIST1H2BBP33778 126 aa1.25□□□□□ -2.21
CHD3-217ENST00000574022 PHBP35232 272 aa1.25□□□□□ -2.21
CHD3-217ENST00000574022 LPAR6P43657 344 aa1.25□□□□□ -2.21
CHD3-217ENST00000574022 CSN1S1P47710 185 aa1.25□□□□□ -2.21
CHD3-217ENST00000574022 SERPINB10P48595 397 aa1.25□□□□□ -2.21
CHD3-217ENST00000574022 FOXA1P55317 472 aa1.25□□□□□ -2.21
CHD3-217ENST00000574022 RWDD2BP57060 319 aa1.25□□□□□ -2.21
CHD3-217ENST00000574022 HIST1H2BDP58876 126 aa1.25□□□□□ -2.21
CHD3-217ENST00000574022 TAS2R30P59541 319 aa1.25□□□□□ -2.21
CHD3-217ENST00000574022 DEFA3P59666 94 aa1.25□□□□□ -2.21
CHD3-217ENST00000574022 RHOBP62745 196 aa1.25□□□□□ -2.21
CHD3-217ENST00000574022 HIST1H2BCP62807 126 aa1.25□□□□□ -2.21
CHD3-217ENST00000574022 RPL30P62888 115 aaKnown RBP1.25□□□□□ -2.21
CHD3-217ENST00000574022 HBA1P69905 142 aa1.25□□□□□ -2.21
CHD3-217ENST00000574022 EIF4EBP1Q13541 118 aaPredicted RBP1.25□□□□□ -2.21
CHD3-217ENST00000574022 ALX1Q15699 326 aa1.25□□□□□ -2.21
CHD3-217ENST00000574022 HIST2H2BEQ16778 126 aa1.25□□□□□ -2.21
CHD3-217ENST00000574022 HIST2H2BFQ5QNW6 126 aaPredicted RBP1.25□□□□□ -2.21
CHD3-217ENST00000574022 AKR1C8PQ5T2L2 129 aa1.25□□□□□ -2.21
CHD3-217ENST00000574022 IBA57Q5T440 356 aaKnown RBP1.25□□□□□ -2.21
CHD3-217ENST00000574022 ZNF660Q6AZW8 331 aaPredicted RBP1.25□□□□□ -2.21
CHD3-217ENST00000574022 ZNF322Q6U7Q0 402 aaPredicted RBP1.25□□□□□ -2.21
CHD3-217ENST00000574022 TMEM136Q6ZRR5 245 aa1.25□□□□□ -2.21
Retrieved 100 of 20,778 RNA–protein pairs in 76.9 ms