RNA–Protein interactions for RNA: ENST00000573994.1

RPA1-206, Transcript of replication protein A1, humanhuman

TSL 2

Gene RPA1, Length 844 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPA1-206ENST00000573994 TINAGL1Q9GZM7 467 aaPredicted RBP7.67□□□□□ -1.18
RPA1-206ENST00000573994 IFT46Q9NQC8 304 aa7.67□□□□□ -1.18
RPA1-206ENST00000573994 CCL28Q9NRJ3 127 aa7.67□□□□□ -1.18
RPA1-206ENST00000573994 ADAM30Q9UKF2 790 aa7.67□□□□□ -1.18
RPA1-206ENST00000573994 LSM4Q9Y4Z0 139 aaKnown RBP7.67□□□□□ -1.18
RPA1-206ENST00000573994 TENM3Q9P273 2699 aa7.67□□□□□ -1.18
RPA1-206ENST00000573994 STAB2Q8WWQ8 2551 aa7.66□□□□□ -1.18
RPA1-206ENST00000573994 HMX3A6NHT5 357 aa7.66□□□□□ -1.18
RPA1-206ENST00000573994 XRCC3O43542 346 aa7.66□□□□□ -1.18
RPA1-206ENST00000573994 ACTL6BO94805 426 aa7.66□□□□□ -1.18
RPA1-206ENST00000573994 PPYP01298 95 aa7.66□□□□□ -1.18
RPA1-206ENST00000573994 OR9G9P0C7N8 305 aa7.66□□□□□ -1.18
RPA1-206ENST00000573994 SPNP16150 400 aa7.66□□□□□ -1.18
RPA1-206ENST00000573994 ZP3P21754 424 aa7.66□□□□□ -1.18
RPA1-206ENST00000573994 KIR2DS2P43631 304 aa7.66□□□□□ -1.18
RPA1-206ENST00000573994 BRWD1-AS2P59051 145 aa7.66□□□□□ -1.18
RPA1-206ENST00000573994 RHOGP84095 191 aa7.66□□□□□ -1.18
RPA1-206ENST00000573994 FAM209BQ5JX69 171 aa7.66□□□□□ -1.18
RPA1-206ENST00000573994 VAX1Q5SQQ9 334 aa7.66□□□□□ -1.18
RPA1-206ENST00000573994 TMEM69Q5SWH9 247 aa7.66□□□□□ -1.18
RPA1-206ENST00000573994 CDPF1Q6NVV7 123 aa7.66□□□□□ -1.18
RPA1-206ENST00000573994 ACSM6Q6P461 480 aa7.66□□□□□ -1.18
RPA1-206ENST00000573994 SSX9Q7RTT3 188 aa7.66□□□□□ -1.18
RPA1-206ENST00000573994 MMD2Q8IY49 270 aa7.66□□□□□ -1.18
RPA1-206ENST00000573994 MFSD4AQ8N468 514 aa7.66□□□□□ -1.18
RPA1-206ENST00000573994 USMG5Q96IX5 58 aa7.66□□□□□ -1.18
RPA1-206ENST00000573994 CMTM3Q96MX0 182 aa7.66□□□□□ -1.18
RPA1-206ENST00000573994 SPIN2AQ99865 258 aa7.66□□□□□ -1.18
RPA1-206ENST00000573994 SPIN2BQ9BPZ2 258 aa7.66□□□□□ -1.18
RPA1-206ENST00000573994 SLC5A7Q9GZV3 580 aa7.66□□□□□ -1.18
RPA1-206ENST00000573994 RANGRFQ9HD47 186 aaPredicted RBP7.66□□□□□ -1.18
RPA1-206ENST00000573994 EHFQ9NZC4 300 aa7.66□□□□□ -1.18
RPA1-206ENST00000573994 TEX22C9J3V5 150 aa7.65□□□□□ -1.18
RPA1-206ENST00000573994 SULT1C2O00338 296 aa7.65□□□□□ -1.18
RPA1-206ENST00000573994 KBTBD11O94819 623 aa7.65□□□□□ -1.18
RPA1-206ENST00000573994 OR2A4O95047 310 aa7.65□□□□□ -1.18
RPA1-206ENST00000573994 EIF4EP06730 217 aaKnown RBP7.65□□□□□ -1.18
RPA1-206ENST00000573994 NHLRC4P0CG21 123 aaPredicted RBP7.65□□□□□ -1.18
RPA1-206ENST00000573994 MYOD1P15172 320 aa7.65□□□□□ -1.18
RPA1-206ENST00000573994 SYNJ2BPP57105 145 aa7.65□□□□□ -1.18
RPA1-206ENST00000573994 VBP1P61758 197 aa7.65□□□□□ -1.18
RPA1-206ENST00000573994 ZNF45Q02386 682 aa7.65□□□□□ -1.18
RPA1-206ENST00000573994 EXOSC2Q13868 293 aaKnown RBP7.65□□□□□ -1.18
RPA1-206ENST00000573994 SLC25A42Q86VD7 318 aa7.65□□□□□ -1.18
RPA1-206ENST00000573994 OR6Q1Q8NGQ2 317 aa7.65□□□□□ -1.18
RPA1-206ENST00000573994 OR51H1Q8NH63 302 aa7.65□□□□□ -1.18
RPA1-206ENST00000573994 GIMAP1Q8WWP7 306 aa7.65□□□□□ -1.18
RPA1-206ENST00000573994 SLC25A46Q96AG3 418 aa7.65□□□□□ -1.18
RPA1-206ENST00000573994 FYTTD1Q96QD9 318 aaKnown RBP7.65□□□□□ -1.18
RPA1-206ENST00000573994 OR2A7Q96R45 310 aa7.65□□□□□ -1.18
RPA1-206ENST00000573994 OR4C12Q96R67 309 aa7.65□□□□□ -1.18
RPA1-206ENST00000573994 ELOVL1Q9BW60 279 aa7.65□□□□□ -1.18
RPA1-206ENST00000573994 FUNDC2Q9BWH2 189 aa7.65□□□□□ -1.18
RPA1-206ENST00000573994 AKIP1Q9NQ31 210 aa7.65□□□□□ -1.18
RPA1-206ENST00000573994 A0A1B0GW64 132 aa7.64□□□□□ -1.19
RPA1-206ENST00000573994 TRIM64CA6NLI5 447 aa7.64□□□□□ -1.19
RPA1-206ENST00000573994 RBFOX2O43251 390 aaKnown RBP eCLIP7.64□□□□□ -1.19
RPA1-206ENST00000573994 OR2J3O76001 311 aa7.64□□□□□ -1.19
RPA1-206ENST00000573994 HRASP01112 189 aa7.64□□□□□ -1.19
RPA1-206ENST00000573994 PMP2P02689 132 aa7.64□□□□□ -1.19
RPA1-206ENST00000573994 FGF2P09038 288 aa7.64□□□□□ -1.19
RPA1-206ENST00000573994 SMIM18P0DKX4 95 aa7.64□□□□□ -1.19
RPA1-206ENST00000573994 GP9P14770 177 aa7.64□□□□□ -1.19
RPA1-206ENST00000573994 AREGP15514 252 aa7.64□□□□□ -1.19
RPA1-206ENST00000573994 MAS1LP35410 378 aa7.64□□□□□ -1.19
RPA1-206ENST00000573994 RPL27AP46776 148 aaKnown RBP7.64□□□□□ -1.19
RPA1-206ENST00000573994 HERV-K104P61576 105 aa7.64□□□□□ -1.19
RPA1-206ENST00000573994 TATDN3Q17R31 274 aa7.64□□□□□ -1.19
RPA1-206ENST00000573994 ZNF818PQ6ZRF7 136 aa7.64□□□□□ -1.19
RPA1-206ENST00000573994 SPAG16Q8N0X2 631 aa7.64□□□□□ -1.19
RPA1-206ENST00000573994 PUSL1Q8N0Z8 303 aaKnown RBP7.64□□□□□ -1.19
RPA1-206ENST00000573994 OR5AP2Q8NGF4 316 aa7.64□□□□□ -1.19
RPA1-206ENST00000573994 TMEM167AQ8TBQ9 72 aa7.64□□□□□ -1.19
RPA1-206ENST00000573994 CD300LFQ8TDQ1 290 aa7.64□□□□□ -1.19
RPA1-206ENST00000573994 NAA50Q9GZZ1 169 aaKnown RBP7.64□□□□□ -1.19
RPA1-206ENST00000573994 FXYD6Q9H0Q3 95 aa7.64□□□□□ -1.19
RPA1-206ENST00000573994 COMMD3Q9UBI1 195 aa7.64□□□□□ -1.19
RPA1-206ENST00000573994 PEF1Q9UBV8 284 aaKnown RBP7.64□□□□□ -1.19
RPA1-206ENST00000573994 ANAPC10Q9UM13 185 aa7.64□□□□□ -1.19
RPA1-206ENST00000573994 NBEAL2Q6ZNJ1 2754 aa7.64□□□□□ -1.19
RPA1-206ENST00000573994 DNAH7Q8WXX0 4024 aa7.63□□□□□ -1.19
RPA1-206ENST00000573994 SMIM31A0A1B0GVY4 71 aa7.63□□□□□ -1.19
RPA1-206ENST00000573994 FAM223BA6NKX1 122 aa7.63□□□□□ -1.19
RPA1-206ENST00000573994 E7EUB6 86 aa7.63□□□□□ -1.19
RPA1-206ENST00000573994 BMPR1BO00238 502 aa7.63□□□□□ -1.19
RPA1-206ENST00000573994 S1PR2O95136 353 aa7.63□□□□□ -1.19
RPA1-206ENST00000573994 IGHV3-23P01764 117 aa7.63□□□□□ -1.19
RPA1-206ENST00000573994 REG1AP05451 166 aa7.63□□□□□ -1.19
RPA1-206ENST00000573994 IL6RP08887 468 aaPredicted RBP7.63□□□□□ -1.19
RPA1-206ENST00000573994 RPA2P15927 270 aa7.63□□□□□ -1.19
RPA1-206ENST00000573994 RFX2P48378 723 aa7.63□□□□□ -1.19
RPA1-206ENST00000573994 CATR1Q13166 79 aa7.63□□□□□ -1.19
RPA1-206ENST00000573994 RPEL1Q2QD12 228 aa7.63□□□□□ -1.19
RPA1-206ENST00000573994 RNASE12Q5GAN4 147 aaKnown RBP7.63□□□□□ -1.19
RPA1-206ENST00000573994 AADACL3Q5VUY0 350 aa7.63□□□□□ -1.19
RPA1-206ENST00000573994 OR4A47Q6IF82 309 aa7.63□□□□□ -1.19
RPA1-206ENST00000573994 ZNF343Q6P1L6 599 aa7.63□□□□□ -1.19
RPA1-206ENST00000573994 DHRS11Q6UWP2 260 aa7.63□□□□□ -1.19
RPA1-206ENST00000573994 ANKRD13BQ86YJ7 626 aa7.63□□□□□ -1.19
RPA1-206ENST00000573994 SNX29P2Q8IUI4 249 aa7.63□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms