RNA–Protein interactions for RNA: ENST00000573936.5

CHD3-216, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 3

Gene CHD3, Length 749 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-216ENST00000573936 IGHG4P01861 327 aa8.66□□□□□ -1.02
CHD3-216ENST00000573936 CTSDP07339 412 aaPredicted RBP8.66□□□□□ -1.02
CHD3-216ENST00000573936 BTCP35070 178 aa8.66□□□□□ -1.02
CHD3-216ENST00000573936 MAS1LP35410 378 aa8.66□□□□□ -1.02
CHD3-216ENST00000573936 ERVK-16P61578 105 aa8.66□□□□□ -1.02
CHD3-216ENST00000573936 GNB1P62873 340 aa8.66□□□□□ -1.02
CHD3-216ENST00000573936 FOXE3Q13461 319 aa8.66□□□□□ -1.02
CHD3-216ENST00000573936 PRSS8Q16651 343 aa8.66□□□□□ -1.02
CHD3-216ENST00000573936 NSUN5P1Q3KNT7 163 aa8.66□□□□□ -1.02
CHD3-216ENST00000573936 AKIRIN2Q53H80 203 aa8.66□□□□□ -1.02
CHD3-216ENST00000573936 CXorf66Q5JRM2 361 aaPredicted RBP8.66□□□□□ -1.02
CHD3-216ENST00000573936 TBC1D26Q86UD7 250 aa8.66□□□□□ -1.02
CHD3-216ENST00000573936 PUSL1Q8N0Z8 303 aaKnown RBP8.66□□□□□ -1.02
CHD3-216ENST00000573936 ARPC1AQ92747 370 aa8.66□□□□□ -1.02
CHD3-216ENST00000573936 RHOVQ96L33 236 aa8.66□□□□□ -1.02
CHD3-216ENST00000573936 CITED2Q99967 270 aaPredicted RBP8.66□□□□□ -1.02
CHD3-216ENST00000573936 C7orf50Q9BRJ6 194 aaKnown RBP8.66□□□□□ -1.02
CHD3-216ENST00000573936 SLC2A9Q9NRM0 540 aa8.66□□□□□ -1.02
CHD3-216ENST00000573936 TPSG1Q9NRR2 321 aa8.66□□□□□ -1.02
CHD3-216ENST00000573936 MCUBQ9NWR8 336 aa8.66□□□□□ -1.02
CHD3-216ENST00000573936 BET1LQ9NYM9 111 aa8.66□□□□□ -1.02
CHD3-216ENST00000573936 COPZ2Q9P299 210 aa8.66□□□□□ -1.02
CHD3-216ENST00000573936 C14orf166Q9Y224 244 aaKnown RBP8.66□□□□□ -1.02
CHD3-216ENST00000573936 NUBP2Q9Y5Y2 271 aa8.66□□□□□ -1.02
CHD3-216ENST00000573936 NAP1L6A6NFF2 107 aa8.65□□□□□ -1.02
CHD3-216ENST00000573936 ARPC1BO15143 372 aaKnown RBP8.65□□□□□ -1.02
CHD3-216ENST00000573936 KBTBD11O94819 623 aa8.65□□□□□ -1.02
CHD3-216ENST00000573936 EGR2P11161 476 aaPredicted RBP8.65□□□□□ -1.02
CHD3-216ENST00000573936 RPA2P15927 270 aa8.65□□□□□ -1.02
CHD3-216ENST00000573936 PPIFP30405 207 aaKnown RBP8.65□□□□□ -1.02
CHD3-216ENST00000573936 LPAR6P43657 344 aa8.65□□□□□ -1.02
CHD3-216ENST00000573936 PIGPP57054 158 aa8.65□□□□□ -1.02
CHD3-216ENST00000573936 NDPQ00604 133 aa8.65□□□□□ -1.02
CHD3-216ENST00000573936 CFHR3Q02985 330 aa8.65□□□□□ -1.02
CHD3-216ENST00000573936 TNXAQ16473 311 aa8.65□□□□□ -1.02
CHD3-216ENST00000573936 POU2AF1Q16633 256 aa8.65□□□□□ -1.02
CHD3-216ENST00000573936 TMEM65Q6PI78 240 aa8.65□□□□□ -1.02
CHD3-216ENST00000573936 UNQ5815/PRO19632Q6UWF5 114 aa8.65□□□□□ -1.02
CHD3-216ENST00000573936 C10orf99Q6UWK7 81 aa8.65□□□□□ -1.02
CHD3-216ENST00000573936 IDO2Q6ZQW0 420 aa8.65□□□□□ -1.02
CHD3-216ENST00000573936 CADM3Q8N126 398 aa8.65□□□□□ -1.02
CHD3-216ENST00000573936 MINDY2Q8NBR6 621 aa8.65□□□□□ -1.02
CHD3-216ENST00000573936 DMBX1Q8NFW5 382 aa8.65□□□□□ -1.02
CHD3-216ENST00000573936 OR4F17Q8NGA8 305 aa8.65□□□□□ -1.02
CHD3-216ENST00000573936 OR51S1Q8NGJ8 323 aa8.65□□□□□ -1.02
CHD3-216ENST00000573936 OR5M8Q8NGP6 311 aa8.65□□□□□ -1.02
CHD3-216ENST00000573936 OR13C8Q8NGS7 320 aa8.65□□□□□ -1.02
CHD3-216ENST00000573936 TMEM167AQ8TBQ9 72 aa8.65□□□□□ -1.02
CHD3-216ENST00000573936 MARCH1Q8TCQ1 289 aa8.65□□□□□ -1.02
CHD3-216ENST00000573936 MRGPRFQ96AM1 343 aa8.65□□□□□ -1.02
CHD3-216ENST00000573936 OR4F4Q96R69 305 aa8.65□□□□□ -1.02
CHD3-216ENST00000573936 WSB1Q9Y6I7 421 aa8.65□□□□□ -1.02
CHD3-216ENST00000573936 A0A1W2PN81 502 aa8.64□□□□□ -1.03
CHD3-216ENST00000573936 CENPXA8MT69 81 aa8.64□□□□□ -1.03
CHD3-216ENST00000573936 G3V318 75 aa8.64□□□□□ -1.03
CHD3-216ENST00000573936 ATG12O94817 140 aa8.64□□□□□ -1.03
CHD3-216ENST00000573936 S1PR2O95136 353 aa8.64□□□□□ -1.03
CHD3-216ENST00000573936 SERPINE2P07093 398 aa8.64□□□□□ -1.03
CHD3-216ENST00000573936 FGF2P09038 288 aa8.64□□□□□ -1.03
CHD3-216ENST00000573936 SLC6A1P30531 599 aa8.64□□□□□ -1.03
CHD3-216ENST00000573936 CHRNA7P36544 502 aa8.64□□□□□ -1.03
CHD3-216ENST00000573936 CCR6P51684 374 aa8.64□□□□□ -1.03
CHD3-216ENST00000573936 PJVKQ0ZLH3 352 aa8.64□□□□□ -1.03
CHD3-216ENST00000573936 ECSCRQ19T08 205 aa8.64□□□□□ -1.03
CHD3-216ENST00000573936 ZNF585BQ52M93 769 aa8.64□□□□□ -1.03
CHD3-216ENST00000573936 TCTEX1D4Q5JR98 221 aa8.64□□□□□ -1.03
CHD3-216ENST00000573936 KHDC1LQ5JSQ8 128 aa8.64□□□□□ -1.03
CHD3-216ENST00000573936 SSX9Q7RTT3 188 aa8.64□□□□□ -1.03
CHD3-216ENST00000573936 VKORC1L1Q8N0U8 176 aa8.64□□□□□ -1.03
CHD3-216ENST00000573936 RNF152Q8N8N0 203 aa8.64□□□□□ -1.03
CHD3-216ENST00000573936 LFNGQ8NES3 379 aa8.64□□□□□ -1.03
CHD3-216ENST00000573936 GRPEL2Q8TAA5 225 aa8.64□□□□□ -1.03
CHD3-216ENST00000573936 R3HDM4Q96D70 268 aa8.64□□□□□ -1.03
CHD3-216ENST00000573936 PHB2Q99623 299 aa8.64□□□□□ -1.03
CHD3-216ENST00000573936 ZNF430Q9H8G1 570 aaPredicted RBP8.64□□□□□ -1.03
CHD3-216ENST00000573936 GPR132Q9UNW8 380 aa8.64□□□□□ -1.03
CHD3-216ENST00000573936 FOXA2Q9Y261 457 aaPredicted RBP8.64□□□□□ -1.03
CHD3-216ENST00000573936 C3orf85A0A1B0GTC6 90 aa8.63□□□□□ -1.03
CHD3-216ENST00000573936 MARCH11A6NNE9 402 aa8.63□□□□□ -1.03
CHD3-216ENST00000573936 H0Y980 276 aa8.63□□□□□ -1.03
CHD3-216ENST00000573936 H3BUA1 57 aa8.63□□□□□ -1.03
CHD3-216ENST00000573936 UPK2O00526 184 aa8.63□□□□□ -1.03
CHD3-216ENST00000573936 IGLV1-40P01703 118 aa8.63□□□□□ -1.03
CHD3-216ENST00000573936 PI3P19957 117 aa8.63□□□□□ -1.03
CHD3-216ENST00000573936 PSMB8P28062 276 aa8.63□□□□□ -1.03
CHD3-216ENST00000573936 DEFA1P59665 94 aa8.63□□□□□ -1.03
CHD3-216ENST00000573936 DEFA3P59666 94 aa8.63□□□□□ -1.03
CHD3-216ENST00000573936 RPL23AP62750 156 aaKnown RBP8.63□□□□□ -1.03
CHD3-216ENST00000573936 RPL8P62917 257 aaKnown RBP8.63□□□□□ -1.03
CHD3-216ENST00000573936 MRGPRG-AS1Q2M3A8 158 aa8.63□□□□□ -1.03
CHD3-216ENST00000573936 C19orf54Q5BKX5 351 aa8.63□□□□□ -1.03
CHD3-216ENST00000573936 HIST2H2BDQ6DRA6 164 aa8.63□□□□□ -1.03
CHD3-216ENST00000573936 OR4A47Q6IF82 309 aa8.63□□□□□ -1.03
CHD3-216ENST00000573936 MZT2BQ6NZ67 158 aa8.63□□□□□ -1.03
CHD3-216ENST00000573936 SLC25A42Q86VD7 318 aa8.63□□□□□ -1.03
CHD3-216ENST00000573936 SRSF12Q8WXF0 261 aaKnown RBP8.63□□□□□ -1.03
CHD3-216ENST00000573936 SPIN2AQ99865 258 aa8.63□□□□□ -1.03
CHD3-216ENST00000573936 SPIN2BQ9BPZ2 258 aa8.63□□□□□ -1.03
CHD3-216ENST00000573936 SLC25A21Q9BQT8 299 aaPredicted RBP8.63□□□□□ -1.03
CHD3-216ENST00000573936 RTBDNQ9BSG5 229 aaPredicted RBP8.63□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms