RNA–Protein interactions for RNA: ENST00000572365.1

SF3B3-214, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 4

Gene SF3B3, Length 575 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-214ENST00000572365 CXCR1P25024 350 aa4.14□□□□□ -1.75
SF3B3-214ENST00000572365 PPT1P50897 306 aa4.14□□□□□ -1.75
SF3B3-214ENST00000572365 GZMMP51124 257 aa4.14□□□□□ -1.75
SF3B3-214ENST00000572365 OR2B8PP59922 312 aa4.14□□□□□ -1.75
SF3B3-214ENST00000572365 RPS23P62266 143 aaKnown RBP4.14□□□□□ -1.75
SF3B3-214ENST00000572365 KIAA0141Q14154 515 aaPredicted RBP4.14□□□□□ -1.75
SF3B3-214ENST00000572365 RAB11BQ15907 218 aa4.14□□□□□ -1.75
SF3B3-214ENST00000572365 TMEM241Q24JQ0 296 aa4.14□□□□□ -1.75
SF3B3-214ENST00000572365 UBE2NLQ5JXB2 153 aa4.14□□□□□ -1.75
SF3B3-214ENST00000572365 GFI1BQ5VTD9 330 aa4.14□□□□□ -1.75
SF3B3-214ENST00000572365 C12orf73Q69YU5 71 aa4.14□□□□□ -1.75
SF3B3-214ENST00000572365 C1orf94Q6P1W5 598 aa4.14□□□□□ -1.75
SF3B3-214ENST00000572365 ULK3Q6PHR2 472 aa4.14□□□□□ -1.75
SF3B3-214ENST00000572365 CBLN2Q8IUK8 224 aa4.14□□□□□ -1.75
SF3B3-214ENST00000572365 SBSPONQ8IVN8 264 aa4.14□□□□□ -1.75
SF3B3-214ENST00000572365 ZNF101Q8IZC7 436 aa4.14□□□□□ -1.75
SF3B3-214ENST00000572365 MTURNQ8N3F0 131 aa4.14□□□□□ -1.75
SF3B3-214ENST00000572365 LRRC18Q8N456 261 aa4.14□□□□□ -1.75
SF3B3-214ENST00000572365 CCDC54Q8NEL0 328 aa4.14□□□□□ -1.75
SF3B3-214ENST00000572365 OR13C8Q8NGS7 320 aa4.14□□□□□ -1.75
SF3B3-214ENST00000572365 SLC25A40Q8TBP6 338 aa4.14□□□□□ -1.75
SF3B3-214ENST00000572365 TRMT10AQ8TBZ6 339 aaKnown RBP4.14□□□□□ -1.75
SF3B3-214ENST00000572365 TNFAIP8L1Q8WVP5 186 aa4.14□□□□□ -1.75
SF3B3-214ENST00000572365 SMIM12Q96EX1 92 aa4.14□□□□□ -1.75
SF3B3-214ENST00000572365 RAB40CQ96S21 281 aa4.14□□□□□ -1.75
SF3B3-214ENST00000572365 SPAG8Q99932 426 aaPredicted RBP4.14□□□□□ -1.75
SF3B3-214ENST00000572365 SLC25A21Q9BQT8 299 aaPredicted RBP4.14□□□□□ -1.75
SF3B3-214ENST00000572365 LINC00470Q9BZP3 86 aa4.14□□□□□ -1.75
SF3B3-214ENST00000572365 OR2J1Q9GZK6 312 aa4.14□□□□□ -1.75
SF3B3-214ENST00000572365 PARLQ9H300 379 aa4.14□□□□□ -1.75
SF3B3-214ENST00000572365 RNF167Q9H6Y7 350 aa4.14□□□□□ -1.75
SF3B3-214ENST00000572365 LYRM2Q9NU23 88 aaPredicted RBP4.14□□□□□ -1.75
SF3B3-214ENST00000572365 IL20RAQ9UHF4 553 aa4.14□□□□□ -1.75
SF3B3-214ENST00000572365 ZNF107Q9UII5 783 aaPredicted RBP4.14□□□□□ -1.75
SF3B3-214ENST00000572365 PITPNC1Q9UKF7 332 aa4.14□□□□□ -1.75
SF3B3-214ENST00000572365 VPREB3Q9UKI3 123 aa4.14□□□□□ -1.75
SF3B3-214ENST00000572365 TIMM10BQ9Y5J6 103 aa4.14□□□□□ -1.75
SF3B3-214ENST00000572365 DSPPQ9NZW4 1301 aa4.14□□□□□ -1.75
SF3B3-214ENST00000572365 DNAH10Q8IVF4 4471 aa4.14□□□□□ -1.75
SF3B3-214ENST00000572365 ALMS1Q8TCU4 4167 aa4.13□□□□□ -1.75
SF3B3-214ENST00000572365 ABCA13Q86UQ4 5058 aa4.13□□□□□ -1.75
SF3B3-214ENST00000572365 TNCP24821 2201 aa4.13□□□□□ -1.75
SF3B3-214ENST00000572365 A0A0U1RQV5 110 aa4.13□□□□□ -1.75
SF3B3-214ENST00000572365 RNASEK-C17orf49H0YIS7 233 aa4.13□□□□□ -1.75
SF3B3-214ENST00000572365 H3BUX3 64 aa4.13□□□□□ -1.75
SF3B3-214ENST00000572365 RPL36A-HNRNPH2H7BZ11 118 aa4.13□□□□□ -1.75
SF3B3-214ENST00000572365 GABRPO00591 440 aa4.13□□□□□ -1.75
SF3B3-214ENST00000572365 MAGEB4O15481 346 aaPredicted RBP4.13□□□□□ -1.75
SF3B3-214ENST00000572365 SIX6O95475 246 aa4.13□□□□□ -1.75
SF3B3-214ENST00000572365 C6orf47O95873 294 aa4.13□□□□□ -1.75
SF3B3-214ENST00000572365 IGHV3-13P01766 116 aa4.13□□□□□ -1.75
SF3B3-214ENST00000572365 IFNW1P05000 195 aa4.13□□□□□ -1.75
SF3B3-214ENST00000572365 PPIAL4GP0DN37 164 aa4.13□□□□□ -1.75
SF3B3-214ENST00000572365 PNMTP11086 282 aa4.13□□□□□ -1.75
SF3B3-214ENST00000572365 NQO2P16083 231 aa4.13□□□□□ -1.75
SF3B3-214ENST00000572365 MSR1P21757 451 aa4.13□□□□□ -1.75
SF3B3-214ENST00000572365 DTYMKP23919 212 aa4.13□□□□□ -1.75
SF3B3-214ENST00000572365 FCGR2BP31994 310 aaPredicted RBP4.13□□□□□ -1.75
SF3B3-214ENST00000572365 FCGR2CP31995 323 aa4.13□□□□□ -1.75
SF3B3-214ENST00000572365 BTCP35070 178 aa4.13□□□□□ -1.75
SF3B3-214ENST00000572365 CHI3L1P36222 383 aaPredicted RBP4.13□□□□□ -1.75
SF3B3-214ENST00000572365 MDH2P40926 338 aaKnown RBP4.13□□□□□ -1.75
SF3B3-214ENST00000572365 POLR2HP52434 150 aaKnown RBP4.13□□□□□ -1.75
SF3B3-214ENST00000572365 SPIBQ01892 262 aa4.13□□□□□ -1.75
SF3B3-214ENST00000572365 JOSD1Q15040 202 aaPredicted RBP4.13□□□□□ -1.75
SF3B3-214ENST00000572365 KIAA0040Q15053 153 aa4.13□□□□□ -1.75
SF3B3-214ENST00000572365 ZNF141Q15928 474 aa4.13□□□□□ -1.75
SF3B3-214ENST00000572365 IQCJQ1A5X6 159 aa4.13□□□□□ -1.75
SF3B3-214ENST00000572365 SLC36A2Q495M3 483 aa4.13□□□□□ -1.75
SF3B3-214ENST00000572365 MESTQ5EB52 335 aa4.13□□□□□ -1.75
SF3B3-214ENST00000572365 ZC2HC1BQ5TFG8 222 aa4.13□□□□□ -1.75
SF3B3-214ENST00000572365 WDR25Q64LD2 544 aaPredicted RBP4.13□□□□□ -1.75
SF3B3-214ENST00000572365 LEMD1Q68G75 181 aa4.13□□□□□ -1.75
SF3B3-214ENST00000572365 OR52W1Q6IF63 320 aa4.13□□□□□ -1.75
SF3B3-214ENST00000572365 SLC25A24Q6NUK1 477 aa4.13□□□□□ -1.75
SF3B3-214ENST00000572365 Q6ZR03 302 aa4.13□□□□□ -1.75
SF3B3-214ENST00000572365 SSX7Q7RTT5 188 aa4.13□□□□□ -1.75
SF3B3-214ENST00000572365 OR2W3Q7Z3T1 314 aa4.13□□□□□ -1.75
SF3B3-214ENST00000572365 C6orf120Q7Z4R8 191 aa4.13□□□□□ -1.75
SF3B3-214ENST00000572365 NDUFA11Q86Y39 141 aa4.13□□□□□ -1.75
SF3B3-214ENST00000572365 ZNF573Q86YE8 665 aa4.13□□□□□ -1.75
SF3B3-214ENST00000572365 BAP18Q8IXM2 172 aa4.13□□□□□ -1.75
SF3B3-214ENST00000572365 OR5AS1Q8N127 324 aa4.13□□□□□ -1.75
SF3B3-214ENST00000572365 ZFP82Q8N141 532 aa4.13□□□□□ -1.75
SF3B3-214ENST00000572365 TMEM104Q8NE00 496 aa4.13□□□□□ -1.75
SF3B3-214ENST00000572365 OR51A7Q8NH64 312 aa4.13□□□□□ -1.75
SF3B3-214ENST00000572365 THEM6Q8WUY1 208 aa4.13□□□□□ -1.75
SF3B3-214ENST00000572365 PPCDCQ96CD2 204 aa4.13□□□□□ -1.75
SF3B3-214ENST00000572365 S100A16Q96FQ6 103 aaKnown RBP4.13□□□□□ -1.75
SF3B3-214ENST00000572365 TECTBQ96PL2 329 aa4.13□□□□□ -1.75
SF3B3-214ENST00000572365 STACQ99469 402 aa4.13□□□□□ -1.75
SF3B3-214ENST00000572365 TEAD3Q99594 435 aa4.13□□□□□ -1.75
SF3B3-214ENST00000572365 PHB2Q99623 299 aa4.13□□□□□ -1.75
SF3B3-214ENST00000572365 NRIP2Q9BQI9 281 aa4.13□□□□□ -1.75
SF3B3-214ENST00000572365 DCTN5Q9BTE1 182 aa4.13□□□□□ -1.75
SF3B3-214ENST00000572365 ZNF471Q9BX82 626 aaPredicted RBP4.13□□□□□ -1.75
SF3B3-214ENST00000572365 ATG5Q9H1Y0 275 aa4.13□□□□□ -1.75
SF3B3-214ENST00000572365 TUBB1Q9H4B7 451 aa4.13□□□□□ -1.75
SF3B3-214ENST00000572365 RPS10P5Q9NQ39 176 aa4.13□□□□□ -1.75
SF3B3-214ENST00000572365 PIPOXQ9P0Z9 390 aa4.13□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms