RNA–Protein interactions for RNA: ENST00000572083.5

CCDC40-206, Transcript of coiled-coil domain containing 40, humanhuman

TSL 2

Gene CCDC40, Length 816 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-206ENST00000572083 DENRO43583 198 aaKnown RBP14.68□□□□□ -0.06
CCDC40-206ENST00000572083 KBTBD11O94819 623 aa14.68□□□□□ -0.06
CCDC40-206ENST00000572083 DIRAS3O95661 229 aa14.68□□□□□ -0.06
CCDC40-206ENST00000572083 REG1AP05451 166 aa14.68□□□□□ -0.06
CCDC40-206ENST00000572083 GNAO1P09471 354 aa14.68□□□□□ -0.06
CCDC40-206ENST00000572083 C8orf88P0DMB2 117 aa14.68□□□□□ -0.06
CCDC40-206ENST00000572083 FCGR2BP31994 310 aaPredicted RBP14.68□□□□□ -0.06
CCDC40-206ENST00000572083 ODF3L2Q3SX64 289 aa14.68□□□□□ -0.06
CCDC40-206ENST00000572083 H1FOOQ8IZA3 346 aaPredicted RBP14.68□□□□□ -0.06
CCDC40-206ENST00000572083 TMEM203Q969S6 136 aa14.68□□□□□ -0.06
CCDC40-206ENST00000572083 MARC2Q969Z3 335 aa14.68□□□□□ -0.06
CCDC40-206ENST00000572083 FAM3DQ96BQ1 224 aa14.68□□□□□ -0.06
CCDC40-206ENST00000572083 RAB3CQ96E17 227 aa14.68□□□□□ -0.06
CCDC40-206ENST00000572083 MND1Q9BWT6 205 aa14.68□□□□□ -0.06
CCDC40-206ENST00000572083 OR51E2Q9H255 320 aa14.68□□□□□ -0.06
CCDC40-206ENST00000572083 SLC2A9Q9NRM0 540 aa14.68□□□□□ -0.06
CCDC40-206ENST00000572083 KIR2DL5BA0A0G2JN68 375 aa14.67□□□□□ -0.06
CCDC40-206ENST00000572083 KIR2DL5BA0A0G2JPC4 375 aa14.67□□□□□ -0.06
CCDC40-206ENST00000572083 S1PR2O95136 353 aa14.67□□□□□ -0.06
CCDC40-206ENST00000572083 CLEC3BP05452 202 aa14.67□□□□□ -0.06
CCDC40-206ENST00000572083 ZNF735P0CB33 412 aa14.67□□□□□ -0.06
CCDC40-206ENST00000572083 GNB3P16520 340 aa14.67□□□□□ -0.06
CCDC40-206ENST00000572083 CTRB1P17538 263 aa14.67□□□□□ -0.06
CCDC40-206ENST00000572083 PSMB6P28072 239 aa14.67□□□□□ -0.06
CCDC40-206ENST00000572083 GPR183P32249 361 aa14.67□□□□□ -0.06
CCDC40-206ENST00000572083 RPL30P62888 115 aaKnown RBP14.67□□□□□ -0.06
CCDC40-206ENST00000572083 C2orf76Q3KRA6 126 aa14.67□□□□□ -0.06
CCDC40-206ENST00000572083 CTRB2Q6GPI1 263 aa14.67□□□□□ -0.06
CCDC40-206ENST00000572083 KIR2DL5AQ8N109 375 aa14.67□□□□□ -0.06
CCDC40-206ENST00000572083 DHRSXQ8N5I4 330 aa14.67□□□□□ -0.06
CCDC40-206ENST00000572083 KIR2DL5BQ8NHK3 375 aa14.67□□□□□ -0.06
CCDC40-206ENST00000572083 SPAG8Q99932 426 aaPredicted RBP14.67□□□□□ -0.06
CCDC40-206ENST00000572083 MRPL27Q9P0M9 148 aaKnown RBP14.67□□□□□ -0.06
CCDC40-206ENST00000572083 IGKV1D-8A0A087WSZ0 117 aa14.66□□□□□ -0.06
CCDC40-206ENST00000572083 TMEM272A0A1B0GTI8 110 aa14.66□□□□□ -0.06
CCDC40-206ENST00000572083 DHFRP00374 187 aa14.66□□□□□ -0.06
CCDC40-206ENST00000572083 CRYGCP07315 174 aa14.66□□□□□ -0.06
CCDC40-206ENST00000572083 NANOS2P60321 138 aaKnown RBP14.66□□□□□ -0.06
CCDC40-206ENST00000572083 LIPKQ5VXJ0 399 aa14.66□□□□□ -0.06
CCDC40-206ENST00000572083 C8orf59Q8N0T1 100 aaPredicted RBP14.66□□□□□ -0.06
CCDC40-206ENST00000572083 ZNF645Q8N7E2 425 aa14.66□□□□□ -0.06
CCDC40-206ENST00000572083 PLCXD1Q9NUJ7 323 aa14.66□□□□□ -0.06
CCDC40-206ENST00000572083 FKBP14Q9NWM8 211 aa14.66□□□□□ -0.06
CCDC40-206ENST00000572083 MRPS7Q9Y2R9 242 aaKnown RBP14.66□□□□□ -0.06
CCDC40-206ENST00000572083 PRELID3BQ9Y3B1 194 aa14.66□□□□□ -0.06
CCDC40-206ENST00000572083 TRBV7-1A0A0A6YYK4 115 aa14.65□□□□□ -0.06
CCDC40-206ENST00000572083 DEFA4P12838 97 aa14.65□□□□□ -0.06
CCDC40-206ENST00000572083 MYOD1P15172 320 aa14.65□□□□□ -0.06
CCDC40-206ENST00000572083 ARFRP1Q13795 201 aa14.65□□□□□ -0.06
CCDC40-206ENST00000572083 TMEM91Q6ZNR0 172 aa14.65□□□□□ -0.06
CCDC40-206ENST00000572083 TMEM167AQ8TBQ9 72 aa14.65□□□□□ -0.06
CCDC40-206ENST00000572083 OR2A7Q96R45 310 aa14.65□□□□□ -0.06
CCDC40-206ENST00000572083 C5orf66Q9H5L9 145 aa14.65□□□□□ -0.06
CCDC40-206ENST00000572083 FBXL17Q9UF56 701 aa14.65□□□□□ -0.06
CCDC40-206ENST00000572083 LSM2Q9Y333 95 aaKnown RBP14.65□□□□□ -0.06
CCDC40-206ENST00000572083 UFC1Q9Y3C8 167 aa14.65□□□□□ -0.06
CCDC40-206ENST00000572083 IGLV11-55A0A075B6I3 123 aa14.64□□□□□ -0.07
CCDC40-206ENST00000572083 RAB27BO00194 218 aa14.64□□□□□ -0.07
CCDC40-206ENST00000572083 TSPAN4O14817 238 aa14.64□□□□□ -0.07
CCDC40-206ENST00000572083 GALP22466 123 aa14.64□□□□□ -0.07
CCDC40-206ENST00000572083 CRHBPP24387 322 aa14.64□□□□□ -0.07
CCDC40-206ENST00000572083 PSMD7P51665 324 aa14.64□□□□□ -0.07
CCDC40-206ENST00000572083 MED22Q15528 200 aa14.64□□□□□ -0.07
CCDC40-206ENST00000572083 PUSL1Q8N0Z8 303 aaKnown RBP14.64□□□□□ -0.07
CCDC40-206ENST00000572083 OR5B3Q8NH48 314 aa14.64□□□□□ -0.07
CCDC40-206ENST00000572083 VSTM2AQ8TAG5 236 aa14.64□□□□□ -0.07
CCDC40-206ENST00000572083 MFNGO00587 321 aa14.63□□□□□ -0.07
CCDC40-206ENST00000572083 HIST1H1BP16401 226 aaKnown RBP14.63□□□□□ -0.07
CCDC40-206ENST00000572083 CD36P16671 472 aa14.63□□□□□ -0.07
CCDC40-206ENST00000572083 MAS1LP35410 378 aa14.63□□□□□ -0.07
CCDC40-206ENST00000572083 ELLP55199 621 aaPredicted RBP14.63□□□□□ -0.07
CCDC40-206ENST00000572083 RBMS2Q15434 407 aaKnown RBP14.63□□□□□ -0.07
CCDC40-206ENST00000572083 SPHARQ15513 63 aa14.63□□□□□ -0.07
CCDC40-206ENST00000572083 KLK9Q2XQG4 91 aa14.63□□□□□ -0.07
CCDC40-206ENST00000572083 HES5Q5TA89 166 aa14.63□□□□□ -0.07
CCDC40-206ENST00000572083 SSX9Q7RTT3 188 aa14.63□□□□□ -0.07
CCDC40-206ENST00000572083 OR10R2Q8NGX6 335 aa14.63□□□□□ -0.07
CCDC40-206ENST00000572083 OR4S2Q8NH73 311 aa14.63□□□□□ -0.07
CCDC40-206ENST00000572083 UFD1Q92890 307 aa14.63□□□□□ -0.07
CCDC40-206ENST00000572083 CXorf58Q96LI9 332 aa14.63□□□□□ -0.07
CCDC40-206ENST00000572083 MAP6D1Q9H9H5 199 aa14.63□□□□□ -0.07
CCDC40-206ENST00000572083 KLK9Q9UKQ9 250 aa14.63□□□□□ -0.07
CCDC40-206ENST00000572083 RAB22AQ9UL26 194 aa14.63□□□□□ -0.07
CCDC40-206ENST00000572083 RBMX2Q9Y388 322 aaKnown RBP14.63□□□□□ -0.07
CCDC40-206ENST00000572083 IGLV2-14P01704 120 aa14.62□□□□□ -0.07
CCDC40-206ENST00000572083 RPA2P15927 270 aa14.62□□□□□ -0.07
CCDC40-206ENST00000572083 HIST1H1DP16402 221 aaKnown RBP14.62□□□□□ -0.07
CCDC40-206ENST00000572083 RPS25P62851 125 aaKnown RBP14.62□□□□□ -0.07
CCDC40-206ENST00000572083 PLET1Q6UQ28 207 aa14.62□□□□□ -0.07
CCDC40-206ENST00000572083 ZNF502Q8TBZ5 544 aa14.62□□□□□ -0.07
CCDC40-206ENST00000572083 TCTEX1D2Q8WW35 142 aa14.62□□□□□ -0.07
CCDC40-206ENST00000572083 GALNT14Q96FL9 552 aa14.62□□□□□ -0.07
CCDC40-206ENST00000572083 DNAH17Q9UFH2 4485 aa14.61□□□□□ -0.07
CCDC40-206ENST00000572083 CGB1A6NKQ9 187 aa14.61□□□□□ -0.07
CCDC40-206ENST00000572083 ARL6IP5O75915 188 aa14.61□□□□□ -0.07
CCDC40-206ENST00000572083 NFYAP23511 347 aaPredicted RBP14.61□□□□□ -0.07
CCDC40-206ENST00000572083 GADD45AP24522 165 aa14.61□□□□□ -0.07
CCDC40-206ENST00000572083 CALRP27797 417 aaKnown RBP14.61□□□□□ -0.07
CCDC40-206ENST00000572083 TALDO1P37837 337 aa14.61□□□□□ -0.07
CCDC40-206ENST00000572083 RPL8P62917 257 aaKnown RBP14.61□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms