RNA–Protein interactions for RNA: ENST00000570380.5

CTDNEP1-202, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 5

Gene CTDNEP1, Length 506 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-202ENST00000570380 SLC2A9Q9NRM0 540 aa7.54□□□□□ -1.2
CTDNEP1-202ENST00000570380 MRPS18AQ9NVS2 196 aaKnown RBP7.54□□□□□ -1.2
CTDNEP1-202ENST00000570380 MGAT4AQ9UM21 535 aa7.54□□□□□ -1.2
CTDNEP1-202ENST00000570380 IGLV11-55A0A075B6I3 123 aa7.53□□□□□ -1.2
CTDNEP1-202ENST00000570380 IFNA10P01566 189 aa7.53□□□□□ -1.2
CTDNEP1-202ENST00000570380 CD74P04233 296 aa7.53□□□□□ -1.2
CTDNEP1-202ENST00000570380 ZNF735P0CB33 412 aa7.53□□□□□ -1.2
CTDNEP1-202ENST00000570380 HIST1H1BP16401 226 aaKnown RBP7.53□□□□□ -1.2
CTDNEP1-202ENST00000570380 RPL27AP46776 148 aaKnown RBP7.53□□□□□ -1.2
CTDNEP1-202ENST00000570380 RASSF2P50749 326 aa7.53□□□□□ -1.2
CTDNEP1-202ENST00000570380 TNP2Q05952 138 aa7.53□□□□□ -1.2
CTDNEP1-202ENST00000570380 UNC119Q13432 240 aa7.53□□□□□ -1.2
CTDNEP1-202ENST00000570380 ZIK1Q3SY52 487 aaPredicted RBP7.53□□□□□ -1.2
CTDNEP1-202ENST00000570380 ZNF767PQ75MW2 155 aa7.53□□□□□ -1.2
CTDNEP1-202ENST00000570380 SSX9Q7RTT3 188 aa7.53□□□□□ -1.2
CTDNEP1-202ENST00000570380 NKAIN3Q8N8D7 197 aa7.53□□□□□ -1.2
CTDNEP1-202ENST00000570380 ZFP41Q8N8Y5 198 aa7.53□□□□□ -1.2
CTDNEP1-202ENST00000570380 ZNF502Q8TBZ5 544 aa7.53□□□□□ -1.2
CTDNEP1-202ENST00000570380 GGHQ92820 318 aa7.53□□□□□ -1.2
CTDNEP1-202ENST00000570380 CXorf58Q96LI9 332 aa7.53□□□□□ -1.2
CTDNEP1-202ENST00000570380 DERL3Q96Q80 235 aa7.53□□□□□ -1.2
CTDNEP1-202ENST00000570380 SLC29A1Q99808 456 aa7.53□□□□□ -1.2
CTDNEP1-202ENST00000570380 NDUFAF3Q9BU61 184 aa7.53□□□□□ -1.2
CTDNEP1-202ENST00000570380 FGF20Q9NP95 211 aaPredicted RBP7.53□□□□□ -1.2
CTDNEP1-202ENST00000570380 DAZ1Q9NQZ3 744 aaKnown RBP7.53□□□□□ -1.2
CTDNEP1-202ENST00000570380 BABAM2Q9NXR7 383 aa7.53□□□□□ -1.2
CTDNEP1-202ENST00000570380 AP4S1Q9Y587 144 aa7.53□□□□□ -1.2
CTDNEP1-202ENST00000570380 IGHV3OR16-8A0A075B7F1 116 aa7.52□□□□□ -1.21
CTDNEP1-202ENST00000570380 SAC3D1A6NKF1 404 aa7.52□□□□□ -1.21
CTDNEP1-202ENST00000570380 C15orf61A6NNL5 157 aa7.52□□□□□ -1.21
CTDNEP1-202ENST00000570380 TRDCB7Z8K6 153 aa7.52□□□□□ -1.21
CTDNEP1-202ENST00000570380 SOCS1O15524 211 aa7.52□□□□□ -1.21
CTDNEP1-202ENST00000570380 ZNF207O43670 478 aaKnown RBP7.52□□□□□ -1.21
CTDNEP1-202ENST00000570380 DHFRP00374 187 aa7.52□□□□□ -1.21
CTDNEP1-202ENST00000570380 ALPLP05186 524 aa7.52□□□□□ -1.21
CTDNEP1-202ENST00000570380 REG1AP05451 166 aa7.52□□□□□ -1.21
CTDNEP1-202ENST00000570380 UBBP0CG47 229 aa7.52□□□□□ -1.21
CTDNEP1-202ENST00000570380 SRMP19623 302 aa7.52□□□□□ -1.21
CTDNEP1-202ENST00000570380 TFPI2P48307 235 aa7.52□□□□□ -1.21
CTDNEP1-202ENST00000570380 CMC4P56277 68 aaPredicted RBP7.52□□□□□ -1.21
CTDNEP1-202ENST00000570380 C12orf74Q32Q52 190 aa7.52□□□□□ -1.21
CTDNEP1-202ENST00000570380 C1orf146Q5VVC0 180 aa7.52□□□□□ -1.21
CTDNEP1-202ENST00000570380 VKORC1L1Q8N0U8 176 aa7.52□□□□□ -1.21
CTDNEP1-202ENST00000570380 OR6M1Q8NGM8 313 aa7.52□□□□□ -1.21
CTDNEP1-202ENST00000570380 RHOXF1Q8NHV9 184 aa7.52□□□□□ -1.21
CTDNEP1-202ENST00000570380 ADTRPQ96IZ2 230 aa7.52□□□□□ -1.21
CTDNEP1-202ENST00000570380 Q96MT0 163 aa7.52□□□□□ -1.21
CTDNEP1-202ENST00000570380 OR51E2Q9H255 320 aa7.52□□□□□ -1.21
CTDNEP1-202ENST00000570380 CELA1Q9UNI1 258 aa7.52□□□□□ -1.21
CTDNEP1-202ENST00000570380 ETV7Q9Y603 341 aa7.52□□□□□ -1.21
CTDNEP1-202ENST00000570380 BET1O15155 118 aa7.51□□□□□ -1.21
CTDNEP1-202ENST00000570380 TGOLN2O43493 480 aa7.51□□□□□ -1.21
CTDNEP1-202ENST00000570380 MRPS14O60783 128 aaKnown RBP7.51□□□□□ -1.21
CTDNEP1-202ENST00000570380 GIG44P09565 113 aaPredicted RBP7.51□□□□□ -1.21
CTDNEP1-202ENST00000570380 MIFP14174 115 aa7.51□□□□□ -1.21
CTDNEP1-202ENST00000570380 SERPINB10P48595 397 aa7.51□□□□□ -1.21
CTDNEP1-202ENST00000570380 QRFPP83859 136 aa7.51□□□□□ -1.21
CTDNEP1-202ENST00000570380 IGSF11Q5DX21 431 aa7.51□□□□□ -1.21
CTDNEP1-202ENST00000570380 TMPRSS11AQ6ZMR5 421 aa7.51□□□□□ -1.21
CTDNEP1-202ENST00000570380 CENPSQ8N2Z9 138 aa7.51□□□□□ -1.21
CTDNEP1-202ENST00000570380 OR4A4PQ8NGN8 299 aa7.51□□□□□ -1.21
CTDNEP1-202ENST00000570380 CENPNQ96H22 339 aaPredicted RBP7.51□□□□□ -1.21
CTDNEP1-202ENST00000570380 RNF2Q99496 336 aa7.51□□□□□ -1.21
CTDNEP1-202ENST00000570380 DCUN1D5Q9BTE7 237 aa7.51□□□□□ -1.21
CTDNEP1-202ENST00000570380 C12orf4Q9NQ89 552 aa7.51□□□□□ -1.21
CTDNEP1-202ENST00000570380 X6R8D5 127 aa7.51□□□□□ -1.21
CTDNEP1-202ENST00000570380 IGKV3-7A0A075B6H7 116 aa7.5□□□□□ -1.21
CTDNEP1-202ENST00000570380 TRBV6-7A0A0A0MS04 114 aa7.5□□□□□ -1.21
CTDNEP1-202ENST00000570380 CGB1A6NKQ9 187 aa7.5□□□□□ -1.21
CTDNEP1-202ENST00000570380 TMEM14DPA8MWL7 114 aa7.5□□□□□ -1.21
CTDNEP1-202ENST00000570380 K7EMT4 169 aa7.5□□□□□ -1.21
CTDNEP1-202ENST00000570380 EBAG9O00559 213 aa7.5□□□□□ -1.21
CTDNEP1-202ENST00000570380 FCGR3BO75015 233 aa7.5□□□□□ -1.21
CTDNEP1-202ENST00000570380 CIB2O75838 187 aa7.5□□□□□ -1.21
CTDNEP1-202ENST00000570380 KBTBD11O94819 623 aa7.5□□□□□ -1.21
CTDNEP1-202ENST00000570380 IFNA21P01568 189 aa7.5□□□□□ -1.21
CTDNEP1-202ENST00000570380 IFNA17P01571 189 aa7.5□□□□□ -1.21
CTDNEP1-202ENST00000570380 FCGR1AP12314 374 aa7.5□□□□□ -1.21
CTDNEP1-202ENST00000570380 DEFA4P12838 97 aa7.5□□□□□ -1.21
CTDNEP1-202ENST00000570380 TMEM50BP56557 158 aa7.5□□□□□ -1.21
CTDNEP1-202ENST00000570380 IRF3Q14653 427 aa7.5□□□□□ -1.21
CTDNEP1-202ENST00000570380 UBE2DNLQ8IWF7 75 aa7.5□□□□□ -1.21
CTDNEP1-202ENST00000570380 APH1BQ8WW43 257 aa7.5□□□□□ -1.21
CTDNEP1-202ENST00000570380 CMSS1Q9BQ75 279 aaKnown RBP7.5□□□□□ -1.21
CTDNEP1-202ENST00000570380 C20orf24Q9BUV8 137 aa7.5□□□□□ -1.21
CTDNEP1-202ENST00000570380 LPAR5Q9H1C0 372 aa7.5□□□□□ -1.21
CTDNEP1-202ENST00000570380 CLEC2DQ9UHP7 191 aa7.5□□□□□ -1.21
CTDNEP1-202ENST00000570380 MYCBP2O75592 4640 aa7.5□□□□□ -1.21
CTDNEP1-202ENST00000570380 UBR4Q5T4S7 5183 aa7.49□□□□□ -1.21
CTDNEP1-202ENST00000570380 FAT1Q14517 4588 aa7.49□□□□□ -1.21
CTDNEP1-202ENST00000570380 OR2T8A6NH00 312 aa7.49□□□□□ -1.21
CTDNEP1-202ENST00000570380 FOXI3A8MTJ6 420 aaPredicted RBP7.49□□□□□ -1.21
CTDNEP1-202ENST00000570380 ZNF705EA8MWA4 302 aaPredicted RBP7.49□□□□□ -1.21
CTDNEP1-202ENST00000570380 NDUFA4O00483 81 aa7.49□□□□□ -1.21
CTDNEP1-202ENST00000570380 FABP7O15540 132 aa7.49□□□□□ -1.21
CTDNEP1-202ENST00000570380 PTBP1P26599 531 aaKnown RBP eCLIP7.49□□□□□ -1.21
CTDNEP1-202ENST00000570380 MAS1LP35410 378 aa7.49□□□□□ -1.21
CTDNEP1-202ENST00000570380 PSMD7P51665 324 aa7.49□□□□□ -1.21
CTDNEP1-202ENST00000570380 ARFRP1Q13795 201 aa7.49□□□□□ -1.21
CTDNEP1-202ENST00000570380 C1orf100Q5SVJ3 147 aa7.49□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms