RNA–Protein interactions for RNA: ENST00000570189.5

MAP1LC3B-208, Transcript of microtubule associated protein 1 light chain 3 beta, humanhuman

TSL 1 (best)

Gene MAP1LC3B, Length 1,259 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MAP1LC3B-208ENST00000570189 Q8N1Y9 231 aa13.03□□□□□ -0.32
MAP1LC3B-208ENST00000570189 BORCS5Q969J3 196 aa13.03□□□□□ -0.32
MAP1LC3B-208ENST00000570189 KCTD12Q96CX2 325 aaKnown RBP13.03□□□□□ -0.32
MAP1LC3B-208ENST00000570189 S100A16Q96FQ6 103 aaKnown RBP13.03□□□□□ -0.32
MAP1LC3B-208ENST00000570189 VCX3AQ9NNX9 186 aa13.03□□□□□ -0.32
MAP1LC3B-208ENST00000570189 SLC2A9Q9NRM0 540 aa13.03□□□□□ -0.32
MAP1LC3B-208ENST00000570189 TAS2R8Q9NYW2 309 aa13.03□□□□□ -0.32
MAP1LC3B-208ENST00000570189 H0Y980 276 aa13.02□□□□□ -0.33
MAP1LC3B-208ENST00000570189 CSN3P07498 182 aa13.02□□□□□ -0.33
MAP1LC3B-208ENST00000570189 IL6RP08887 468 aaPredicted RBP13.02□□□□□ -0.33
MAP1LC3B-208ENST00000570189 APELAP0DMC3 54 aa13.02□□□□□ -0.33
MAP1LC3B-208ENST00000570189 NAT1P18440 290 aa13.02□□□□□ -0.33
MAP1LC3B-208ENST00000570189 RPS19P39019 145 aaKnown RBP13.02□□□□□ -0.33
MAP1LC3B-208ENST00000570189 RPL27AP46776 148 aaKnown RBP13.02□□□□□ -0.33
MAP1LC3B-208ENST00000570189 ATP5G2Q06055 141 aa13.02□□□□□ -0.33
MAP1LC3B-208ENST00000570189 RPEL1Q2QD12 228 aa13.02□□□□□ -0.33
MAP1LC3B-208ENST00000570189 OR2B11Q5JQS5 317 aa13.02□□□□□ -0.33
MAP1LC3B-208ENST00000570189 C10orf55Q5SWW7 151 aa13.02□□□□□ -0.33
MAP1LC3B-208ENST00000570189 SBSPONQ8IVN8 264 aa13.02□□□□□ -0.33
MAP1LC3B-208ENST00000570189 VKORC1L1Q8N0U8 176 aa13.02□□□□□ -0.33
MAP1LC3B-208ENST00000570189 TSPAN14Q8NG11 270 aa13.02□□□□□ -0.33
MAP1LC3B-208ENST00000570189 OR2K2Q8NGT1 345 aa13.02□□□□□ -0.33
MAP1LC3B-208ENST00000570189 SECTM1Q8WVN6 248 aa13.02□□□□□ -0.33
MAP1LC3B-208ENST00000570189 THAP7Q9BT49 309 aaPredicted RBP13.02□□□□□ -0.33
MAP1LC3B-208ENST00000570189 CCL28Q9NRJ3 127 aa13.02□□□□□ -0.33
MAP1LC3B-208ENST00000570189 ADAM30Q9UKF2 790 aa13.02□□□□□ -0.33
MAP1LC3B-208ENST00000570189 NBEAL2Q6ZNJ1 2754 aa13.01□□□□□ -0.33
MAP1LC3B-208ENST00000570189 A0A1B0GW64 132 aa13.01□□□□□ -0.33
MAP1LC3B-208ENST00000570189 BMPR1BO00238 502 aa13.01□□□□□ -0.33
MAP1LC3B-208ENST00000570189 TAS2R31P59538 309 aa13.01□□□□□ -0.33
MAP1LC3B-208ENST00000570189 RPL8P62917 257 aaKnown RBP13.01□□□□□ -0.33
MAP1LC3B-208ENST00000570189 DEFA5Q01523 94 aa13.01□□□□□ -0.33
MAP1LC3B-208ENST00000570189 CATR1Q13166 79 aa13.01□□□□□ -0.33
MAP1LC3B-208ENST00000570189 EXOSC2Q13868 293 aaKnown RBP13.01□□□□□ -0.33
MAP1LC3B-208ENST00000570189 DHRS11Q6UWP2 260 aa13.01□□□□□ -0.33
MAP1LC3B-208ENST00000570189 CADM3Q8N126 398 aa13.01□□□□□ -0.33
MAP1LC3B-208ENST00000570189 CD300LFQ8TDQ1 290 aa13.01□□□□□ -0.33
MAP1LC3B-208ENST00000570189 CMTM3Q96MX0 182 aa13.01□□□□□ -0.33
MAP1LC3B-208ENST00000570189 C19orf73Q9NVV2 129 aa13.01□□□□□ -0.33
MAP1LC3B-208ENST00000570189 PEMTQ9UBM1 199 aa13.01□□□□□ -0.33
MAP1LC3B-208ENST00000570189 DMRT1Q9Y5R6 373 aa13.01□□□□□ -0.33
MAP1LC3B-208ENST00000570189 E7EUB6 86 aa13□□□□□ -0.33
MAP1LC3B-208ENST00000570189 HPRT1P00492 218 aa13□□□□□ -0.33
MAP1LC3B-208ENST00000570189 TGFBR1P36897 503 aa13□□□□□ -0.33
MAP1LC3B-208ENST00000570189 C15orf32Q32M92 178 aa13□□□□□ -0.33
MAP1LC3B-208ENST00000570189 OR4A47Q6IF82 309 aa13□□□□□ -0.33
MAP1LC3B-208ENST00000570189 ZNF818PQ6ZRF7 136 aa13□□□□□ -0.33
MAP1LC3B-208ENST00000570189 SPAG16Q8N0X2 631 aa13□□□□□ -0.33
MAP1LC3B-208ENST00000570189 Q8N402 240 aa13□□□□□ -0.33
MAP1LC3B-208ENST00000570189 SLC25A46Q96AG3 418 aa13□□□□□ -0.33
MAP1LC3B-208ENST00000570189 ASCL2Q99929 193 aa13□□□□□ -0.33
MAP1LC3B-208ENST00000570189 SRSF8Q9BRL6 282 aaKnown RBP13□□□□□ -0.33
MAP1LC3B-208ENST00000570189 RSRP1Q9BUV0 290 aa13□□□□□ -0.33
MAP1LC3B-208ENST00000570189 SLC5A7Q9GZV3 580 aa13□□□□□ -0.33
MAP1LC3B-208ENST00000570189 PLEKHA2Q9HB19 425 aa13□□□□□ -0.33
MAP1LC3B-208ENST00000570189 C3orf84H3BNL1 204 aa12.99□□□□□ -0.33
MAP1LC3B-208ENST00000570189 DHFRP00374 187 aa12.99□□□□□ -0.33
MAP1LC3B-208ENST00000570189 PRH1P02810 166 aa12.99□□□□□ -0.33
MAP1LC3B-208ENST00000570189 PTHLHP12272 177 aa12.99□□□□□ -0.33
MAP1LC3B-208ENST00000570189 NQO2P16083 231 aa12.99□□□□□ -0.33
MAP1LC3B-208ENST00000570189 CTRB1P17538 263 aa12.99□□□□□ -0.33
MAP1LC3B-208ENST00000570189 PSMB6P28072 239 aa12.99□□□□□ -0.33
MAP1LC3B-208ENST00000570189 CTRB2Q6GPI1 263 aa12.99□□□□□ -0.33
MAP1LC3B-208ENST00000570189 LCN12Q6JVE5 192 aa12.99□□□□□ -0.33
MAP1LC3B-208ENST00000570189 FANCD2OSQ96PS1 177 aa12.99□□□□□ -0.33
MAP1LC3B-208ENST00000570189 FYTTD1Q96QD9 318 aaKnown RBP12.99□□□□□ -0.33
MAP1LC3B-208ENST00000570189 TM2D3Q9BRN9 247 aa12.99□□□□□ -0.33
MAP1LC3B-208ENST00000570189 IFT46Q9NQC8 304 aa12.99□□□□□ -0.33
MAP1LC3B-208ENST00000570189 HMX3A6NHT5 357 aa12.98□□□□□ -0.33
MAP1LC3B-208ENST00000570189 LGALS9O00182 355 aa12.98□□□□□ -0.33
MAP1LC3B-208ENST00000570189 IGHV4-30-4P0DP06 118 aa12.98□□□□□ -0.33
MAP1LC3B-208ENST00000570189 HIST1H1BP16401 226 aaKnown RBP12.98□□□□□ -0.33
MAP1LC3B-208ENST00000570189 HLA-GP17693 338 aa12.98□□□□□ -0.33
MAP1LC3B-208ENST00000570189 TAS2R46P59540 309 aa12.98□□□□□ -0.33
MAP1LC3B-208ENST00000570189 TAS2R20P59543 309 aa12.98□□□□□ -0.33
MAP1LC3B-208ENST00000570189 TMEM69Q5SWH9 247 aa12.98□□□□□ -0.33
MAP1LC3B-208ENST00000570189 HAPLN4Q86UW8 402 aa12.98□□□□□ -0.33
MAP1LC3B-208ENST00000570189 LAX1Q8IWV1 398 aa12.98□□□□□ -0.33
MAP1LC3B-208ENST00000570189 SGPP2Q8IWX5 399 aa12.98□□□□□ -0.33
MAP1LC3B-208ENST00000570189 SAMD12Q8N8I0 201 aa12.98□□□□□ -0.33
MAP1LC3B-208ENST00000570189 MOB3AQ96BX8 217 aa12.98□□□□□ -0.33
MAP1LC3B-208ENST00000570189 RCHY1Q96PM5 261 aa12.98□□□□□ -0.33
MAP1LC3B-208ENST00000570189 GPHA2Q96T91 129 aa12.98□□□□□ -0.33
MAP1LC3B-208ENST00000570189 COMMD9Q9P000 198 aa12.98□□□□□ -0.33
MAP1LC3B-208ENST00000570189 CGB1A6NKQ9 187 aa12.97□□□□□ -0.33
MAP1LC3B-208ENST00000570189 SULT1C2O00338 296 aa12.97□□□□□ -0.33
MAP1LC3B-208ENST00000570189 TNFSF12O43508 249 aa12.97□□□□□ -0.33
MAP1LC3B-208ENST00000570189 OR2J3O76001 311 aa12.97□□□□□ -0.33
MAP1LC3B-208ENST00000570189 GNRHRP30968 328 aa12.97□□□□□ -0.33
MAP1LC3B-208ENST00000570189 OR2B8PP59922 312 aa12.97□□□□□ -0.33
MAP1LC3B-208ENST00000570189 THOC7Q6I9Y2 204 aaKnown RBP12.97□□□□□ -0.33
MAP1LC3B-208ENST00000570189 GPHB5Q86YW7 130 aa12.97□□□□□ -0.33
MAP1LC3B-208ENST00000570189 ZMAT4Q9H898 229 aa12.97□□□□□ -0.33
MAP1LC3B-208ENST00000570189 EHFQ9NZC4 300 aa12.97□□□□□ -0.33
MAP1LC3B-208ENST00000570189 IGLV11-55A0A075B6I3 123 aa12.96□□□□□ -0.33
MAP1LC3B-208ENST00000570189 DPPA5A6NC42 116 aa12.96□□□□□ -0.33
MAP1LC3B-208ENST00000570189 UPK2O00526 184 aa12.96□□□□□ -0.33
MAP1LC3B-208ENST00000570189 GGCTO75223 188 aaKnown RBP12.96□□□□□ -0.33
MAP1LC3B-208ENST00000570189 APOA1P02647 267 aa12.96□□□□□ -0.33
MAP1LC3B-208ENST00000570189 AREGP15514 252 aa12.96□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms