RNA–Protein interactions for RNA: ENST00000569891.5

CYLD-216, Transcript of CYLD lysine 63 deubiquitinase, humanhuman

TSL 1 (best)

Gene CYLD, Length 4,665 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CYLD-216ENST00000569891 C19orf12Q9NSK7 152 aa4.97□□□□□ -1.61
CYLD-216ENST00000569891 C15orf61A6NNL5 157 aa4.96□□□□□ -1.61
CYLD-216ENST00000569891 CST7O76096 145 aa4.96□□□□□ -1.61
CYLD-216ENST00000569891 SNAPINO95295 136 aa4.96□□□□□ -1.61
CYLD-216ENST00000569891 CFDP00746 253 aaPredicted RBP4.96□□□□□ -1.61
CYLD-216ENST00000569891 DANCRP0C864 163 aa4.96□□□□□ -1.61
CYLD-216ENST00000569891 HTR1DP28221 377 aa4.96□□□□□ -1.61
CYLD-216ENST00000569891 PLGLAQ15195 96 aa4.96□□□□□ -1.61
CYLD-216ENST00000569891 MST1LQ2TV78 715 aa4.96□□□□□ -1.61
CYLD-216ENST00000569891 TMEM177Q53S58 311 aa4.96□□□□□ -1.61
CYLD-216ENST00000569891 MINOS1Q5TGZ0 78 aa4.96□□□□□ -1.61
CYLD-216ENST00000569891 FAM213BQ8TBF2 198 aa4.96□□□□□ -1.61
CYLD-216ENST00000569891 ACTR3CQ9C0K3 210 aaPredicted RBP4.96□□□□□ -1.61
CYLD-216ENST00000569891 MINOS1-NBL1R4GNA1 71 aa4.96□□□□□ -1.61
CYLD-216ENST00000569891 ESPL1Q14674 2120 aa4.96□□□□□ -1.62
CYLD-216ENST00000569891 IGKV1-5P01602 117 aa4.96□□□□□ -1.62
CYLD-216ENST00000569891 LOXP28300 417 aaPredicted RBP4.96□□□□□ -1.62
CYLD-216ENST00000569891 DVL1P1P54792 670 aaPredicted RBP4.96□□□□□ -1.62
CYLD-216ENST00000569891 ETV3LQ6ZN32 361 aa4.96□□□□□ -1.62
CYLD-216ENST00000569891 TEX45Q8NA69 505 aa4.96□□□□□ -1.62
CYLD-216ENST00000569891 SRSF8Q9BRL6 282 aaKnown RBP4.96□□□□□ -1.62
CYLD-216ENST00000569891 HINT2Q9BX68 163 aa4.96□□□□□ -1.62
CYLD-216ENST00000569891 CYTL1Q9NRR1 136 aa4.96□□□□□ -1.62
CYLD-216ENST00000569891 PKHD1P08F94 4074 aa4.96□□□□□ -1.62
CYLD-216ENST00000569891 MSGN1A6NI15 193 aa4.96□□□□□ -1.62
CYLD-216ENST00000569891 NPY1RP25929 384 aa4.96□□□□□ -1.62
CYLD-216ENST00000569891 ZNF137PP52743 207 aa4.96□□□□□ -1.62
CYLD-216ENST00000569891 RPL8P62917 257 aaKnown RBP4.96□□□□□ -1.62
CYLD-216ENST00000569891 OR8G2PQ6IF36 304 aa4.96□□□□□ -1.62
CYLD-216ENST00000569891 ZNF439Q8NDP4 499 aa4.96□□□□□ -1.62
CYLD-216ENST00000569891 TMEM190Q8WZ59 177 aa4.96□□□□□ -1.62
CYLD-216ENST00000569891 EIF5A2Q9GZV4 153 aaKnown RBP4.96□□□□□ -1.62
CYLD-216ENST00000569891 HRH4Q9H3N8 390 aa4.96□□□□□ -1.62
CYLD-216ENST00000569891 OR51B2Q9Y5P1 312 aa4.96□□□□□ -1.62
CYLD-216ENST00000569891 IGSF23A1L1A6 192 aa4.96□□□□□ -1.62
CYLD-216ENST00000569891 SMCO3A2RU48 225 aa4.96□□□□□ -1.62
CYLD-216ENST00000569891 UPK2O00526 184 aa4.96□□□□□ -1.62
CYLD-216ENST00000569891 METTL15P1P0C7V9 234 aa4.96□□□□□ -1.62
CYLD-216ENST00000569891 TMEM182Q6ZP80 229 aaPredicted RBP4.96□□□□□ -1.62
CYLD-216ENST00000569891 SSX9Q7RTT3 188 aa4.96□□□□□ -1.62
CYLD-216ENST00000569891 MOB3BQ86TA1 216 aa4.96□□□□□ -1.62
CYLD-216ENST00000569891 THNSL2Q86YJ6 484 aa4.96□□□□□ -1.62
CYLD-216ENST00000569891 SLC24A4Q8NFF2 622 aa4.96□□□□□ -1.62
CYLD-216ENST00000569891 CCL19Q99731 98 aa4.96□□□□□ -1.62
CYLD-216ENST00000569891 C19orf24Q9BVV8 132 aa4.96□□□□□ -1.62
CYLD-216ENST00000569891 SLC39A9Q9NUM3 307 aa4.96□□□□□ -1.62
CYLD-216ENST00000569891 DPM3Q9P2X0 92 aa4.96□□□□□ -1.62
CYLD-216ENST00000569891 TCF19Q9Y242 345 aa4.96□□□□□ -1.62
CYLD-216ENST00000569891 A0A1W2PPV4 95 aa4.95□□□□□ -1.62
CYLD-216ENST00000569891 MFSD2BA6NFX1 497 aa4.95□□□□□ -1.62
CYLD-216ENST00000569891 PLAUP00749 431 aa4.95□□□□□ -1.62
CYLD-216ENST00000569891 ATP6V0CP27449 155 aa4.95□□□□□ -1.62
CYLD-216ENST00000569891 RPL30P62888 115 aaKnown RBP4.95□□□□□ -1.62
CYLD-216ENST00000569891 NHLH2Q02577 135 aa4.95□□□□□ -1.62
CYLD-216ENST00000569891 TFF3Q07654 80 aa4.95□□□□□ -1.62
CYLD-216ENST00000569891 EIF4EBP1Q13541 118 aaPredicted RBP4.95□□□□□ -1.62
CYLD-216ENST00000569891 ZNF273Q14593 569 aa4.95□□□□□ -1.62
CYLD-216ENST00000569891 AARDQ4LEZ3 155 aa4.95□□□□□ -1.62
CYLD-216ENST00000569891 RPL39P5Q59GN2 51 aa4.95□□□□□ -1.62
CYLD-216ENST00000569891 TMEM14EPQ6UXP3 125 aa4.95□□□□□ -1.62
CYLD-216ENST00000569891 C22orf34Q6ZV56 151 aa4.95□□□□□ -1.62
CYLD-216ENST00000569891 TXNDC17Q9BRA2 123 aa4.95□□□□□ -1.62
CYLD-216ENST00000569891 CUL9Q8IWT3 2517 aa4.95□□□□□ -1.62
CYLD-216ENST00000569891 DYSFO75923 2080 aa4.95□□□□□ -1.62
CYLD-216ENST00000569891 FGF7P21781 194 aa4.95□□□□□ -1.62
CYLD-216ENST00000569891 AKR1C1Q04828 323 aa4.95□□□□□ -1.62
CYLD-216ENST00000569891 HLA-DRB5Q30154 266 aa4.95□□□□□ -1.62
CYLD-216ENST00000569891 TMEM41BQ5BJD5 291 aa4.95□□□□□ -1.62
CYLD-216ENST00000569891 OR4A47Q6IF82 309 aa4.95□□□□□ -1.62
CYLD-216ENST00000569891 C11orf71Q6IPW1 123 aa4.95□□□□□ -1.62
CYLD-216ENST00000569891 OR5AN1Q8NGI8 311 aa4.95□□□□□ -1.62
CYLD-216ENST00000569891 CACNG8Q8WXS5 425 aa4.95□□□□□ -1.62
CYLD-216ENST00000569891 NEUROG1Q92886 237 aa4.95□□□□□ -1.62
CYLD-216ENST00000569891 NPVFQ9HCQ7 196 aa4.95□□□□□ -1.62
CYLD-216ENST00000569891 TBL2Q9Y4P3 447 aaKnown RBP4.95□□□□□ -1.62
CYLD-216ENST00000569891 SPTA1P02549 2419 aa4.95□□□□□ -1.62
CYLD-216ENST00000569891 F8W036 122 aa4.95□□□□□ -1.62
CYLD-216ENST00000569891 NDUFS6O75380 124 aaKnown RBP4.95□□□□□ -1.62
CYLD-216ENST00000569891 TMEM267Q0VDI3 215 aaPredicted RBP4.95□□□□□ -1.62
CYLD-216ENST00000569891 HNF4GQ14541 408 aa4.95□□□□□ -1.62
CYLD-216ENST00000569891 LRRC75BQ2VPJ9 315 aa4.95□□□□□ -1.62
CYLD-216ENST00000569891 IGHV2-26A0A0B4J1V2 119 aa4.94□□□□□ -1.62
CYLD-216ENST00000569891 TNFRSF13BO14836 293 aaPredicted RBP4.94□□□□□ -1.62
CYLD-216ENST00000569891 IGLV2-14P01704 120 aa4.94□□□□□ -1.62
CYLD-216ENST00000569891 PRTN3P24158 256 aa4.94□□□□□ -1.62
CYLD-216ENST00000569891 COL8A2P25067 703 aa4.94□□□□□ -1.62
CYLD-216ENST00000569891 TAS2R45P59539 299 aa4.94□□□□□ -1.62
CYLD-216ENST00000569891 PRCDQ00LT1 54 aa4.94□□□□□ -1.62
CYLD-216ENST00000569891 AVPI1Q5T686 147 aa4.94□□□□□ -1.62
CYLD-216ENST00000569891 ZCCHC24Q8N2G6 241 aaKnown RBP4.94□□□□□ -1.62
CYLD-216ENST00000569891 TMEM167AQ8TBQ9 72 aa4.94□□□□□ -1.62
CYLD-216ENST00000569891 TAF15Q92804 592 aaKnown RBP eCLIP4.94□□□□□ -1.62
CYLD-216ENST00000569891 LINC00473A8K010 186 aa4.94□□□□□ -1.62
CYLD-216ENST00000569891 RAMP3O60896 148 aa4.94□□□□□ -1.62
CYLD-216ENST00000569891 SELLP14151 372 aa4.94□□□□□ -1.62
CYLD-216ENST00000569891 CCL3L1P16619 93 aa4.94□□□□□ -1.62
CYLD-216ENST00000569891 TOR2AQ5JU69 321 aa4.94□□□□□ -1.62
CYLD-216ENST00000569891 FAM74A1Q5RGS3 127 aa4.94□□□□□ -1.62
CYLD-216ENST00000569891 RNASEH2CQ8TDP1 164 aaKnown RBP4.94□□□□□ -1.62
CYLD-216ENST00000569891 DDB2Q92466 427 aa4.94□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms