RNA–Protein interactions for RNA: ENST00000569422.1

LINC00558-201, long intergenic non-protein coding RNA 558, humanhuman

TSL 1 (best) BASIC

Gene LINC00558, Length 3,163 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00558-201ENST00000569422 CXCL1P09341 107 aa7.28□□□□□ -1.24
LINC00558-201ENST00000569422 CEACAM1P13688 526 aa7.28□□□□□ -1.24
LINC00558-201ENST00000569422 C4orf17Q53FE4 359 aa7.28□□□□□ -1.24
LINC00558-201ENST00000569422 PDZD11Q5EBL8 140 aa7.28□□□□□ -1.24
LINC00558-201ENST00000569422 ZNF506Q5JVG8 444 aa7.28□□□□□ -1.24
LINC00558-201ENST00000569422 ACSM6Q6P461 480 aa7.28□□□□□ -1.24
LINC00558-201ENST00000569422 RPP25LQ8N5L8 163 aaKnown RBP7.28□□□□□ -1.24
LINC00558-201ENST00000569422 GCSAMQ8N6F7 178 aa7.28□□□□□ -1.24
LINC00558-201ENST00000569422 SLC25A15Q9Y619 301 aa7.28□□□□□ -1.24
LINC00558-201ENST00000569422 LOC102723971A0A1B0GUV8 181 aa7.28□□□□□ -1.24
LINC00558-201ENST00000569422 CYB5BO43169 146 aa7.28□□□□□ -1.24
LINC00558-201ENST00000569422 ZNF737O75373 536 aa7.28□□□□□ -1.24
LINC00558-201ENST00000569422 CYB5R3P00387 301 aaPredicted RBP7.28□□□□□ -1.24
LINC00558-201ENST00000569422 IFNA10P01566 189 aa7.28□□□□□ -1.24
LINC00558-201ENST00000569422 HSPB1P04792 205 aaKnown RBP7.28□□□□□ -1.24
LINC00558-201ENST00000569422 OR9G9P0C7N8 305 aa7.28□□□□□ -1.24
LINC00558-201ENST00000569422 KITLGP21583 273 aa7.28□□□□□ -1.24
LINC00558-201ENST00000569422 IGFL2Q6UWQ7 119 aa7.28□□□□□ -1.24
LINC00558-201ENST00000569422 RNASE8Q8TDE3 154 aaKnown RBP7.28□□□□□ -1.24
LINC00558-201ENST00000569422 Q8WTZ3 238 aa7.28□□□□□ -1.24
LINC00558-201ENST00000569422 CFHR4Q92496 578 aa7.28□□□□□ -1.24
LINC00558-201ENST00000569422 SPTA1P02549 2419 aa7.27□□□□□ -1.25
LINC00558-201ENST00000569422 TRAV3A0A0B4J244 114 aa7.27□□□□□ -1.25
LINC00558-201ENST00000569422 TM4SF5O14894 197 aa7.27□□□□□ -1.25
LINC00558-201ENST00000569422 CGAP01215 116 aa7.27□□□□□ -1.25
LINC00558-201ENST00000569422 BCL2P10415 239 aa7.27□□□□□ -1.25
LINC00558-201ENST00000569422 ARL3P36405 182 aa7.27□□□□□ -1.25
LINC00558-201ENST00000569422 ZNF134P52741 427 aa7.27□□□□□ -1.25
LINC00558-201ENST00000569422 GCSAMLQ5JQS6 135 aa7.27□□□□□ -1.25
LINC00558-201ENST00000569422 FFAR4Q5NUL3 377 aa7.27□□□□□ -1.25
LINC00558-201ENST00000569422 SNRNP40Q96DI7 357 aaKnown RBP7.27□□□□□ -1.25
LINC00558-201ENST00000569422 SIRT7Q9NRC8 400 aa7.27□□□□□ -1.25
LINC00558-201ENST00000569422 HSPB7Q9UBY9 170 aa7.27□□□□□ -1.25
LINC00558-201ENST00000569422 FAM215AQ9Y5M1 114 aa7.27□□□□□ -1.25
LINC00558-201ENST00000569422 PIGBOS1A0A0B4J2F0 54 aa7.27□□□□□ -1.25
LINC00558-201ENST00000569422 A0A1W2PPV4 95 aa7.27□□□□□ -1.25
LINC00558-201ENST00000569422 PROP1O75360 226 aa7.27□□□□□ -1.25
LINC00558-201ENST00000569422 YIF1AO95070 293 aa7.27□□□□□ -1.25
LINC00558-201ENST00000569422 CLDN14O95500 239 aa7.27□□□□□ -1.25
LINC00558-201ENST00000569422 NBEAP1P0C6P0 100 aa7.27□□□□□ -1.25
LINC00558-201ENST00000569422 COL8A2P25067 703 aa7.27□□□□□ -1.25
LINC00558-201ENST00000569422 NDUFA6P56556 154 aa7.27□□□□□ -1.25
LINC00558-201ENST00000569422 KLF3P57682 345 aaPredicted RBP7.27□□□□□ -1.25
LINC00558-201ENST00000569422 KIAA0141Q14154 515 aaPredicted RBP7.27□□□□□ -1.25
LINC00558-201ENST00000569422 GAMTQ14353 236 aa7.27□□□□□ -1.25
LINC00558-201ENST00000569422 P2RY6Q15077 328 aa7.27□□□□□ -1.25
LINC00558-201ENST00000569422 ADIRFQ15847 76 aa7.27□□□□□ -1.25
LINC00558-201ENST00000569422 KHDC3LQ587J8 217 aa7.27□□□□□ -1.25
LINC00558-201ENST00000569422 TMEM41BQ5BJD5 291 aa7.27□□□□□ -1.25
LINC00558-201ENST00000569422 SPNS3Q6ZMD2 512 aa7.27□□□□□ -1.25
LINC00558-201ENST00000569422 ZNF709Q8N972 641 aa7.27□□□□□ -1.25
LINC00558-201ENST00000569422 OR10G4Q8NGN3 311 aa7.27□□□□□ -1.25
LINC00558-201ENST00000569422 OR10G9Q8NGN4 311 aa7.27□□□□□ -1.25
LINC00558-201ENST00000569422 OR10G7Q8NGN6 311 aa7.27□□□□□ -1.25
LINC00558-201ENST00000569422 PERPQ96FX8 193 aa7.27□□□□□ -1.25
LINC00558-201ENST00000569422 SEBOXQ9HB31 216 aaPredicted RBP7.27□□□□□ -1.25
LINC00558-201ENST00000569422 HEYLQ9NQ87 328 aaPredicted RBP7.27□□□□□ -1.25
LINC00558-201ENST00000569422 ZNRD1Q9P1U0 126 aa7.27□□□□□ -1.25
LINC00558-201ENST00000569422 MUC6Q6W4X9 2439 aa7.27□□□□□ -1.25
LINC00558-201ENST00000569422 NBASA2RRP1 2371 aa7.27□□□□□ -1.25
LINC00558-201ENST00000569422 SCGB2A1O75556 95 aa7.26□□□□□ -1.25
LINC00558-201ENST00000569422 IGLV1-44P01699 117 aa7.26□□□□□ -1.25
LINC00558-201ENST00000569422 TNFRSF1AP19438 455 aa7.26□□□□□ -1.25
LINC00558-201ENST00000569422 CEACAM3P40198 252 aa7.26□□□□□ -1.25
LINC00558-201ENST00000569422 CCL8P80075 99 aa7.26□□□□□ -1.25
LINC00558-201ENST00000569422 CDPF1Q6NVV7 123 aa7.26□□□□□ -1.25
LINC00558-201ENST00000569422 TMEM14EPQ6UXP3 125 aa7.26□□□□□ -1.25
LINC00558-201ENST00000569422 OR4A16Q8NH70 328 aa7.26□□□□□ -1.25
LINC00558-201ENST00000569422 SNIP1Q8TAD8 396 aaKnown RBP7.26□□□□□ -1.25
LINC00558-201ENST00000569422 AGMATQ9BSE5 352 aa7.26□□□□□ -1.25
LINC00558-201ENST00000569422 AURKAIP1Q9NWT8 199 aaPredicted RBP7.26□□□□□ -1.25
LINC00558-201ENST00000569422 TBL2Q9Y4P3 447 aaKnown RBP7.26□□□□□ -1.25
LINC00558-201ENST00000569422 TRAV25A0A0B4J276 109 aa7.26□□□□□ -1.25
LINC00558-201ENST00000569422 A0A1B0GW15 77 aa7.26□□□□□ -1.25
LINC00558-201ENST00000569422 C15orf65H3BRN8 121 aa7.26□□□□□ -1.25
LINC00558-201ENST00000569422 AGAP20933 346 aa7.26□□□□□ -1.25
LINC00558-201ENST00000569422 ATP5J2P56134 94 aa7.26□□□□□ -1.25
LINC00558-201ENST00000569422 USF2Q15853 346 aaPredicted RBP7.26□□□□□ -1.25
LINC00558-201ENST00000569422 MORN2Q502X0 79 aa7.26□□□□□ -1.25
LINC00558-201ENST00000569422 ABHD12Q8N2K0 398 aa7.26□□□□□ -1.25
LINC00558-201ENST00000569422 CCL13Q99616 98 aa7.26□□□□□ -1.25
LINC00558-201ENST00000569422 TCEAL7Q9BRU2 100 aa7.26□□□□□ -1.25
LINC00558-201ENST00000569422 EGLN1Q9GZT9 426 aa7.26□□□□□ -1.25
LINC00558-201ENST00000569422 PATZ1Q9HBE1 687 aaKnown RBP7.26□□□□□ -1.25
LINC00558-201ENST00000569422 TPRP12270 2363 aaKnown RBP7.26□□□□□ -1.25
LINC00558-201ENST00000569422 CHD3Q12873 2000 aaKnown RBP7.26□□□□□ -1.25
LINC00558-201ENST00000569422 TRAV38-1A0A0B4J264 116 aa7.26□□□□□ -1.25
LINC00558-201ENST00000569422 A0A1B0GW64 132 aa7.26□□□□□ -1.25
LINC00558-201ENST00000569422 C5orf52A6NGY3 159 aa7.26□□□□□ -1.25
LINC00558-201ENST00000569422 SRRM5B3KS81 715 aa7.26□□□□□ -1.25
LINC00558-201ENST00000569422 GYPAP02724 150 aa7.26□□□□□ -1.25
LINC00558-201ENST00000569422 RD3LP0DJH9 198 aa7.26□□□□□ -1.25
LINC00558-201ENST00000569422 MYOD1P15172 320 aa7.26□□□□□ -1.25
LINC00558-201ENST00000569422 DUTP33316 252 aaKnown RBP7.26□□□□□ -1.25
LINC00558-201ENST00000569422 RNF212Q495C1 297 aa7.26□□□□□ -1.25
LINC00558-201ENST00000569422 MBNL2Q5VZF2 373 aaKnown RBP7.26□□□□□ -1.25
LINC00558-201ENST00000569422 FAM90A2PQ658T7 463 aa7.26□□□□□ -1.25
LINC00558-201ENST00000569422 OR4F5Q8NH21 305 aa7.26□□□□□ -1.25
LINC00558-201ENST00000569422 FAM222BQ8WU58 562 aa7.26□□□□□ -1.25
LINC00558-201ENST00000569422 OR4F4Q96R69 305 aa7.26□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms