RNA–Protein interactions for RNA: ENST00000568290.1

ATXN3-250, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 671 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-250ENST00000568290 SHISA2Q6UWI4 295 aa6.35□□□□□ -1.39
ATXN3-250ENST00000568290 SPNS3Q6ZMD2 512 aa6.35□□□□□ -1.39
ATXN3-250ENST00000568290 TMEM144Q7Z5S9 345 aa6.35□□□□□ -1.39
ATXN3-250ENST00000568290 LINC01551Q86U37 167 aa6.35□□□□□ -1.39
ATXN3-250ENST00000568290 LINC00469Q8N7U9 141 aa6.35□□□□□ -1.39
ATXN3-250ENST00000568290 OR2Z1Q8NG97 314 aa6.35□□□□□ -1.39
ATXN3-250ENST00000568290 OR13A1Q8NGR1 328 aa6.35□□□□□ -1.39
ATXN3-250ENST00000568290 OR1L4Q8NGR5 311 aa6.35□□□□□ -1.39
ATXN3-250ENST00000568290 MBD3L2Q8NHZ7 208 aaPredicted RBP6.35□□□□□ -1.39
ATXN3-250ENST00000568290 OSR1Q8TAX0 266 aaPredicted RBP6.35□□□□□ -1.39
ATXN3-250ENST00000568290 ABHD5Q8WTS1 349 aa6.35□□□□□ -1.39
ATXN3-250ENST00000568290 C22orf15Q8WYQ4 148 aa6.35□□□□□ -1.39
ATXN3-250ENST00000568290 GPHA2Q96T91 129 aa6.35□□□□□ -1.39
ATXN3-250ENST00000568290 TMEM140Q9NV12 185 aa6.35□□□□□ -1.39
ATXN3-250ENST00000568290 CALYQ9NYX4 217 aa6.35□□□□□ -1.39
ATXN3-250ENST00000568290 CRIM1Q9NZV1 1036 aa6.35□□□□□ -1.39
ATXN3-250ENST00000568290 IL17BQ9UHF5 180 aa6.35□□□□□ -1.39
ATXN3-250ENST00000568290 TCF19Q9Y242 345 aa6.35□□□□□ -1.39
ATXN3-250ENST00000568290 WISP2O76076 250 aa6.34□□□□□ -1.39
ATXN3-250ENST00000568290 SOD3P08294 240 aa6.34□□□□□ -1.39
ATXN3-250ENST00000568290 GPX4P36969 197 aaPredicted RBP6.34□□□□□ -1.39
ATXN3-250ENST00000568290 VDAC2P45880 294 aaPredicted RBP6.34□□□□□ -1.39
ATXN3-250ENST00000568290 CCL11P51671 97 aa6.34□□□□□ -1.39
ATXN3-250ENST00000568290 EDDM3BP56851 147 aa6.34□□□□□ -1.39
ATXN3-250ENST00000568290 BPIFB3P59826 476 aa6.34□□□□□ -1.39
ATXN3-250ENST00000568290 YPEL3P61236 119 aaPredicted RBP6.34□□□□□ -1.39
ATXN3-250ENST00000568290 ERVS71-1P61550 626 aa6.34□□□□□ -1.39
ATXN3-250ENST00000568290 SELENOTP62341 195 aa6.34□□□□□ -1.39
ATXN3-250ENST00000568290 RPL30P62888 115 aaKnown RBP6.34□□□□□ -1.39
ATXN3-250ENST00000568290 MRPS11P82912 194 aaKnown RBP6.34□□□□□ -1.39
ATXN3-250ENST00000568290 EDDM3AQ14507 147 aa6.34□□□□□ -1.39
ATXN3-250ENST00000568290 C3AR1Q16581 482 aa6.34□□□□□ -1.39
ATXN3-250ENST00000568290 IZUMO4Q1ZYL8 232 aa6.34□□□□□ -1.39
ATXN3-250ENST00000568290 RPEL1Q2QD12 228 aa6.34□□□□□ -1.39
ATXN3-250ENST00000568290 DHRS13Q6UX07 377 aa6.34□□□□□ -1.39
ATXN3-250ENST00000568290 Q6ZS46 218 aa6.34□□□□□ -1.39
ATXN3-250ENST00000568290 C11orf53Q8IXP5 236 aa6.34□□□□□ -1.39
ATXN3-250ENST00000568290 DEFB123Q8N688 67 aa6.34□□□□□ -1.39
ATXN3-250ENST00000568290 OR1L8Q8NGR8 309 aa6.34□□□□□ -1.39
ATXN3-250ENST00000568290 GATAD1Q8WUU5 269 aa6.34□□□□□ -1.39
ATXN3-250ENST00000568290 C11orf52Q96A22 123 aa6.34□□□□□ -1.39
ATXN3-250ENST00000568290 SMIM12Q96EX1 92 aa6.34□□□□□ -1.39
ATXN3-250ENST00000568290 CYYR1Q96J86 154 aa6.34□□□□□ -1.39
ATXN3-250ENST00000568290 MEGF10Q96KG7 1140 aa6.34□□□□□ -1.39
ATXN3-250ENST00000568290 RHOVQ96L33 236 aa6.34□□□□□ -1.39
ATXN3-250ENST00000568290 RBM14Q96PK6 669 aaKnown RBP6.34□□□□□ -1.39
ATXN3-250ENST00000568290 PCGF1Q9BSM1 259 aa6.34□□□□□ -1.39
ATXN3-250ENST00000568290 QTRT1Q9BXR0 403 aaKnown RBP6.34□□□□□ -1.39
ATXN3-250ENST00000568290 NGBQ9NPG2 151 aa6.34□□□□□ -1.39
ATXN3-250ENST00000568290 ZNF71Q9NQZ8 489 aaPredicted RBP6.34□□□□□ -1.39
ATXN3-250ENST00000568290 TMEM14BQ9NUH8 114 aa6.34□□□□□ -1.39
ATXN3-250ENST00000568290 BET1LQ9NYM9 111 aa6.34□□□□□ -1.39
ATXN3-250ENST00000568290 IDI2-AS1Q9NZ38 188 aa6.34□□□□□ -1.39
ATXN3-250ENST00000568290 IL36BQ9NZH7 164 aa6.34□□□□□ -1.39
ATXN3-250ENST00000568290 TRAV39A0A0B4J263 110 aa6.33□□□□□ -1.4
ATXN3-250ENST00000568290 TRAV38-1A0A0B4J264 116 aa6.33□□□□□ -1.4
ATXN3-250ENST00000568290 A0A1W2PRE2 83 aa6.33□□□□□ -1.4
ATXN3-250ENST00000568290 INS-IGF2F8WCM5 200 aa6.33□□□□□ -1.4
ATXN3-250ENST00000568290 NDUFB4O95168 129 aa6.33□□□□□ -1.4
ATXN3-250ENST00000568290 CELA3BP08861 270 aa6.33□□□□□ -1.4
ATXN3-250ENST00000568290 OR5G3P0C626 314 aa6.33□□□□□ -1.4
ATXN3-250ENST00000568290 OR10J4P0C629 311 aa6.33□□□□□ -1.4
ATXN3-250ENST00000568290 GCHFRP30047 84 aa6.33□□□□□ -1.4
ATXN3-250ENST00000568290 SSTR5P35346 364 aa6.33□□□□□ -1.4
ATXN3-250ENST00000568290 TIMP3P35625 211 aa6.33□□□□□ -1.4
ATXN3-250ENST00000568290 TAS2R60P59551 318 aa6.33□□□□□ -1.4
ATXN3-250ENST00000568290 TFF3Q07654 80 aa6.33□□□□□ -1.4
ATXN3-250ENST00000568290 LPAL2Q16609 132 aa6.33□□□□□ -1.4
ATXN3-250ENST00000568290 C2orf83Q53S99 150 aa6.33□□□□□ -1.4
ATXN3-250ENST00000568290 FAM78BQ5VT40 261 aa6.33□□□□□ -1.4
ATXN3-250ENST00000568290 CXorf67Q86X51 503 aaPredicted RBP6.33□□□□□ -1.4
ATXN3-250ENST00000568290 TMEM105Q8N8V8 129 aa6.33□□□□□ -1.4
ATXN3-250ENST00000568290 C8orf31Q8N9H6 132 aa6.33□□□□□ -1.4
ATXN3-250ENST00000568290 SGMS2Q8NHU3 365 aa6.33□□□□□ -1.4
ATXN3-250ENST00000568290 Q8TCH9 128 aa6.33□□□□□ -1.4
ATXN3-250ENST00000568290 FAM222BQ8WU58 562 aa6.33□□□□□ -1.4
ATXN3-250ENST00000568290 NDUFAF3Q9BU61 184 aa6.33□□□□□ -1.4
ATXN3-250ENST00000568290 SSBP4Q9BWG4 385 aaPredicted RBP6.33□□□□□ -1.4
ATXN3-250ENST00000568290 GGTLC1Q9BX51 225 aa6.33□□□□□ -1.4
ATXN3-250ENST00000568290 GNB1LQ9BYB4 327 aa6.33□□□□□ -1.4
ATXN3-250ENST00000568290 LINC00574Q9H8X3 128 aa6.33□□□□□ -1.4
ATXN3-250ENST00000568290 DUSP13Q9UII6 198 aa6.33□□□□□ -1.4
ATXN3-250ENST00000568290 RNF24Q9Y225 148 aa6.33□□□□□ -1.4
ATXN3-250ENST00000568290 FUT9Q9Y231 359 aa6.33□□□□□ -1.4
ATXN3-250ENST00000568290 SLC25A15Q9Y619 301 aa6.33□□□□□ -1.4
ATXN3-250ENST00000568290 LAMA2P24043 3122 aaKnown RBP6.32□□□□□ -1.4
ATXN3-250ENST00000568290 C5orf42Q9H799 3197 aa6.32□□□□□ -1.4
ATXN3-250ENST00000568290 IGLV3-9A0A075B6K5 115 aa6.32□□□□□ -1.4
ATXN3-250ENST00000568290 IGHV1-18A0A0C4DH31 117 aa6.32□□□□□ -1.4
ATXN3-250ENST00000568290 HELTA6NFD8 242 aa6.32□□□□□ -1.4
ATXN3-250ENST00000568290 LINC00473A8K010 186 aa6.32□□□□□ -1.4
ATXN3-250ENST00000568290 ZNF705GA8MUZ8 300 aaPredicted RBP6.32□□□□□ -1.4
ATXN3-250ENST00000568290 J3QR06 171 aa6.32□□□□□ -1.4
ATXN3-250ENST00000568290 CORTO00230 105 aa6.32□□□□□ -1.4
ATXN3-250ENST00000568290 CDX4O14627 284 aaPredicted RBP6.32□□□□□ -1.4
ATXN3-250ENST00000568290 PHOX2AO14813 284 aa6.32□□□□□ -1.4
ATXN3-250ENST00000568290 IGKV1D-33P01593 117 aa6.32□□□□□ -1.4
ATXN3-250ENST00000568290 IGKV1-33P01594 117 aa6.32□□□□□ -1.4
ATXN3-250ENST00000568290 HLA-DQA1P01909 254 aa6.32□□□□□ -1.4
ATXN3-250ENST00000568290 AMBPP02760 352 aa6.32□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 51.8 ms