RNA–Protein interactions for RNA: ENST00000568219.5

PALB2-206, Transcript of partner and localizer of BRCA2, humanhuman

TSL 1 (best) BASIC

Gene PALB2, Length 3,963 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PALB2-206ENST00000568219 ZFP36L1Q07352 338 aaKnown RBP9.19□□□□□ -0.94
PALB2-206ENST00000568219 MOB1BQ7L9L4 216 aa9.19□□□□□ -0.94
PALB2-206ENST00000568219 LYG1Q8N1E2 194 aa9.19□□□□□ -0.94
PALB2-206ENST00000568219 ZIC4Q8N9L1 334 aa9.19□□□□□ -0.94
PALB2-206ENST00000568219 OR8B3Q8NGG8 313 aa9.19□□□□□ -0.94
PALB2-206ENST00000568219 LOXL4Q96JB6 756 aa9.19□□□□□ -0.94
PALB2-206ENST00000568219 DCTN5Q9BTE1 182 aa9.19□□□□□ -0.94
PALB2-206ENST00000568219 IL19Q9UHD0 177 aa9.19□□□□□ -0.94
PALB2-206ENST00000568219 SLC45A2Q9UMX9 530 aa9.19□□□□□ -0.94
PALB2-206ENST00000568219 SPEGQ15772 3267 aa9.19□□□□□ -0.94
PALB2-206ENST00000568219 OR5B21A6NL26 309 aa9.19□□□□□ -0.94
PALB2-206ENST00000568219 WNT9BO14905 357 aa9.19□□□□□ -0.94
PALB2-206ENST00000568219 FCER1GP30273 86 aa9.19□□□□□ -0.94
PALB2-206ENST00000568219 ZNF324BQ6AW86 544 aaPredicted RBP9.19□□□□□ -0.94
PALB2-206ENST00000568219 PPP1R35Q8TAP8 253 aa9.19□□□□□ -0.94
PALB2-206ENST00000568219 CLEC5AQ9NY25 188 aa9.19□□□□□ -0.94
PALB2-206ENST00000568219 CRIM1Q9NZV1 1036 aa9.19□□□□□ -0.94
PALB2-206ENST00000568219 GAGE10A6NGK3 116 aa9.18□□□□□ -0.94
PALB2-206ENST00000568219 FOXI3A8MTJ6 420 aaPredicted RBP9.18□□□□□ -0.94
PALB2-206ENST00000568219 J3QT63 122 aa9.18□□□□□ -0.94
PALB2-206ENST00000568219 LYZL6O75951 148 aa9.18□□□□□ -0.94
PALB2-206ENST00000568219 Q5PR19 223 aa9.18□□□□□ -0.94
PALB2-206ENST00000568219 C1orf174Q8IYL3 243 aa9.18□□□□□ -0.94
PALB2-206ENST00000568219 NFAM1Q8NET5 270 aaPredicted RBP9.18□□□□□ -0.94
PALB2-206ENST00000568219 KCNE4Q8WWG9 221 aa9.18□□□□□ -0.94
PALB2-206ENST00000568219 CORO2AQ92828 525 aa9.18□□□□□ -0.94
PALB2-206ENST00000568219 SF3B5Q9BWJ5 86 aaKnown RBP9.18□□□□□ -0.94
PALB2-206ENST00000568219 MS4A5Q9H3V2 200 aa9.18□□□□□ -0.94
PALB2-206ENST00000568219 NPVFQ9HCQ7 196 aa9.18□□□□□ -0.94
PALB2-206ENST00000568219 SPTAN1Q13813 2472 aaKnown RBP9.18□□□□□ -0.94
PALB2-206ENST00000568219 H3BTX0 84 aa9.18□□□□□ -0.94
PALB2-206ENST00000568219 FRMD6-AS1P0C7T7 363 aa9.18□□□□□ -0.94
PALB2-206ENST00000568219 CRYGSP22914 178 aa9.18□□□□□ -0.94
PALB2-206ENST00000568219 S100A7AQ86SG5 101 aa9.18□□□□□ -0.94
PALB2-206ENST00000568219 ZNF784Q8NCA9 323 aaPredicted RBP9.18□□□□□ -0.94
PALB2-206ENST00000568219 FAM122AQ96E09 287 aa9.18□□□□□ -0.94
PALB2-206ENST00000568219 NEURL1O76050 574 aa9.18□□□□□ -0.94
PALB2-206ENST00000568219 GPX1P07203 203 aa9.18□□□□□ -0.94
PALB2-206ENST00000568219 NPY1RP25929 384 aa9.18□□□□□ -0.94
PALB2-206ENST00000568219 RPL8P62917 257 aaKnown RBP9.18□□□□□ -0.94
PALB2-206ENST00000568219 HOXA4Q00056 320 aaPredicted RBP9.18□□□□□ -0.94
PALB2-206ENST00000568219 NHLH1Q02575 133 aa9.18□□□□□ -0.94
PALB2-206ENST00000568219 SPATA31B1PQ5VZV4 182 aa9.18□□□□□ -0.94
PALB2-206ENST00000568219 AMMECR1LQ6DCA0 310 aa9.18□□□□□ -0.94
PALB2-206ENST00000568219 MPC1Q9Y5U8 109 aa9.18□□□□□ -0.94
PALB2-206ENST00000568219 APC2O95996 2303 aa9.18□□□□□ -0.94
PALB2-206ENST00000568219 A0A0G2JMM0 328 aa9.17□□□□□ -0.94
PALB2-206ENST00000568219 A0A1W2PPB8 328 aa9.17□□□□□ -0.94
PALB2-206ENST00000568219 A0A1W2PRS3 328 aa9.17□□□□□ -0.94
PALB2-206ENST00000568219 KIR3DP1A8MWS1 328 aa9.17□□□□□ -0.94
PALB2-206ENST00000568219 CCL25O15444 150 aa9.17□□□□□ -0.94
PALB2-206ENST00000568219 COX7A2P2O60397 106 aa9.17□□□□□ -0.94
PALB2-206ENST00000568219 HYPMO75409 117 aa9.17□□□□□ -0.94
PALB2-206ENST00000568219 ZNF324O75467 553 aaPredicted RBP9.17□□□□□ -0.94
PALB2-206ENST00000568219 IGKV1-39P01597 117 aa9.17□□□□□ -0.94
PALB2-206ENST00000568219 IGKV1D-39P04432 117 aa9.17□□□□□ -0.94
PALB2-206ENST00000568219 APELAP0DMC3 54 aa9.17□□□□□ -0.94
PALB2-206ENST00000568219 ORM2P19652 201 aa9.17□□□□□ -0.94
PALB2-206ENST00000568219 SRD5A2P31213 254 aa9.17□□□□□ -0.94
PALB2-206ENST00000568219 COMPP49747 757 aaPredicted RBP9.17□□□□□ -0.94
PALB2-206ENST00000568219 RPL30P62888 115 aaKnown RBP9.17□□□□□ -0.94
PALB2-206ENST00000568219 FOXL1Q12952 345 aa9.17□□□□□ -0.94
PALB2-206ENST00000568219 UBE2V1Q13404 147 aa9.17□□□□□ -0.94
PALB2-206ENST00000568219 MPV17L2Q567V2 206 aa9.17□□□□□ -0.94
PALB2-206ENST00000568219 GTF2H5Q6ZYL4 71 aa9.17□□□□□ -0.94
PALB2-206ENST00000568219 C20orf144Q9BQM9 153 aa9.17□□□□□ -0.94
PALB2-206ENST00000568219 ENSAO43768 121 aaKnown RBP9.17□□□□□ -0.94
PALB2-206ENST00000568219 MNX1P50219 401 aaPredicted RBP9.17□□□□□ -0.94
PALB2-206ENST00000568219 MUC15Q8N387 334 aa9.17□□□□□ -0.94
PALB2-206ENST00000568219 CHRDL1Q9BU40 450 aa9.17□□□□□ -0.94
PALB2-206ENST00000568219 SLC25A5P05141 298 aaKnown RBP9.17□□□□□ -0.94
PALB2-206ENST00000568219 WDR74Q6RFH5 385 aaPredicted RBP9.17□□□□□ -0.94
PALB2-206ENST00000568219 STPG3Q8N7X2 389 aa9.17□□□□□ -0.94
PALB2-206ENST00000568219 SCCPDHQ8NBX0 429 aa9.17□□□□□ -0.94
PALB2-206ENST00000568219 TMEM191AQ9H0A3 160 aa9.17□□□□□ -0.94
PALB2-206ENST00000568219 EPOPA6NHQ4 379 aa9.16□□□□□ -0.94
PALB2-206ENST00000568219 FOXH1O75593 365 aa9.16□□□□□ -0.94
PALB2-206ENST00000568219 HLA-DQA1P01909 254 aa9.16□□□□□ -0.94
PALB2-206ENST00000568219 MT-ND6P03923 174 aa9.16□□□□□ -0.94
PALB2-206ENST00000568219 OR5AL1P0C617 328 aa9.16□□□□□ -0.94
PALB2-206ENST00000568219 GFRA1P56159 465 aa9.16□□□□□ -0.94
PALB2-206ENST00000568219 NIT1Q86X76 327 aa9.16□□□□□ -0.94
PALB2-206ENST00000568219 SPOCK3Q9BQ16 436 aa9.16□□□□□ -0.94
PALB2-206ENST00000568219 GAL3ST2Q9H3Q3 398 aa9.16□□□□□ -0.94
PALB2-206ENST00000568219 SEPSECSQ9HD40 501 aaKnown RBP9.16□□□□□ -0.94
PALB2-206ENST00000568219 TIMM9Q9Y5J7 89 aa9.16□□□□□ -0.94
PALB2-206ENST00000568219 OR4C46A6NHA9 309 aa9.16□□□□□ -0.94
PALB2-206ENST00000568219 C5orf67F2Z3F1 127 aa9.16□□□□□ -0.94
PALB2-206ENST00000568219 LEPROTL1O95214 131 aa9.16□□□□□ -0.94
PALB2-206ENST00000568219 MT-CO3P00414 261 aa9.16□□□□□ -0.94
PALB2-206ENST00000568219 PSG1P11464 419 aa9.16□□□□□ -0.94
PALB2-206ENST00000568219 HTR1DP28221 377 aa9.16□□□□□ -0.94
PALB2-206ENST00000568219 ZNF585BQ52M93 769 aa9.16□□□□□ -0.94
PALB2-206ENST00000568219 ZNF645Q8N7E2 425 aa9.16□□□□□ -0.94
PALB2-206ENST00000568219 SPSB4Q96A44 273 aa9.16□□□□□ -0.94
PALB2-206ENST00000568219 AGMATQ9BSE5 352 aa9.16□□□□□ -0.94
PALB2-206ENST00000568219 DUSP23Q9BVJ7 150 aa9.16□□□□□ -0.94
PALB2-206ENST00000568219 C12orf77C9JDV5 145 aa9.16□□□□□ -0.94
PALB2-206ENST00000568219 FAM90A26D6RGX4 464 aa9.16□□□□□ -0.94
PALB2-206ENST00000568219 NPPCP23582 126 aa9.16□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms