RNA–Protein interactions for RNA: ENST00000567805.5

CLK3-219, Transcript of CDC like kinase 3, humanhuman

TSL 3

Gene CLK3, Length 327 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-219ENST00000567805 SPNP16150 400 aa3.67□□□□□ -1.82
CLK3-219ENST00000567805 FCGR2CP31995 323 aa3.67□□□□□ -1.82
CLK3-219ENST00000567805 MAS1LP35410 378 aa3.67□□□□□ -1.82
CLK3-219ENST00000567805 KIR2DS2P43631 304 aa3.67□□□□□ -1.82
CLK3-219ENST00000567805 BRWD1-AS2P59051 145 aa3.67□□□□□ -1.82
CLK3-219ENST00000567805 DYRK1AQ13627 763 aa3.67□□□□□ -1.82
CLK3-219ENST00000567805 KLF5Q13887 457 aaPredicted RBP3.67□□□□□ -1.82
CLK3-219ENST00000567805 OR2B11Q5JQS5 317 aa3.67□□□□□ -1.82
CLK3-219ENST00000567805 FAM209BQ5JX69 171 aa3.67□□□□□ -1.82
CLK3-219ENST00000567805 UBE2NLQ5JXB2 153 aa3.67□□□□□ -1.82
CLK3-219ENST00000567805 SLC25A42Q86VD7 318 aa3.67□□□□□ -1.82
CLK3-219ENST00000567805 FAM223AQ8IWN6 122 aa3.67□□□□□ -1.82
CLK3-219ENST00000567805 PUSL1Q8N0Z8 303 aaKnown RBP3.67□□□□□ -1.82
CLK3-219ENST00000567805 MFSD4AQ8N468 514 aa3.67□□□□□ -1.82
CLK3-219ENST00000567805 ZBTB34Q8NCN2 500 aa3.67□□□□□ -1.82
CLK3-219ENST00000567805 OR5AP2Q8NGF4 316 aa3.67□□□□□ -1.82
CLK3-219ENST00000567805 OR9G4Q8NGQ1 327 aa3.67□□□□□ -1.82
CLK3-219ENST00000567805 OR13F1Q8NGS4 319 aa3.67□□□□□ -1.82
CLK3-219ENST00000567805 SECTM1Q8WVN6 248 aa3.67□□□□□ -1.82
CLK3-219ENST00000567805 GIMAP1Q8WWP7 306 aa3.67□□□□□ -1.82
CLK3-219ENST00000567805 SNAPC3Q92966 411 aa3.67□□□□□ -1.82
CLK3-219ENST00000567805 BORCS5Q969J3 196 aa3.67□□□□□ -1.82
CLK3-219ENST00000567805 YIPF6Q96EC8 236 aa3.67□□□□□ -1.82
CLK3-219ENST00000567805 S100A16Q96FQ6 103 aaKnown RBP3.67□□□□□ -1.82
CLK3-219ENST00000567805 WWC2-AS2Q96NR7 200 aa3.67□□□□□ -1.82
CLK3-219ENST00000567805 CLUHP3Q96NS8 147 aa3.67□□□□□ -1.82
CLK3-219ENST00000567805 OR2A7Q96R45 310 aa3.67□□□□□ -1.82
CLK3-219ENST00000567805 AIFM2Q9BRQ8 373 aa3.67□□□□□ -1.82
CLK3-219ENST00000567805 AUNIPQ9H7T9 357 aa3.67□□□□□ -1.82
CLK3-219ENST00000567805 IFT46Q9NQC8 304 aa3.67□□□□□ -1.82
CLK3-219ENST00000567805 TAS2R8Q9NYW2 309 aa3.67□□□□□ -1.82
CLK3-219ENST00000567805 PEF1Q9UBV8 284 aaKnown RBP3.67□□□□□ -1.82
CLK3-219ENST00000567805 SMAD5-AS1Q9Y6J3 95 aa3.67□□□□□ -1.82
CLK3-219ENST00000567805 CSMD3Q7Z407 3707 aa3.66□□□□□ -1.82
CLK3-219ENST00000567805 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP3.66□□□□□ -1.82
CLK3-219ENST00000567805 TRBV9A0A0B4J1U6 114 aa3.66□□□□□ -1.82
CLK3-219ENST00000567805 TRIM64CA6NLI5 447 aa3.66□□□□□ -1.82
CLK3-219ENST00000567805 NPIPB5A8MRT5 1133 aa3.66□□□□□ -1.82
CLK3-219ENST00000567805 TEX22C9J3V5 150 aa3.66□□□□□ -1.82
CLK3-219ENST00000567805 SULT1C2O00338 296 aa3.66□□□□□ -1.82
CLK3-219ENST00000567805 RBFOX2O43251 390 aaKnown RBP eCLIP3.66□□□□□ -1.82
CLK3-219ENST00000567805 TNFSF12O43508 249 aa3.66□□□□□ -1.82
CLK3-219ENST00000567805 RBMXL2O75526 392 aaKnown RBP3.66□□□□□ -1.82
CLK3-219ENST00000567805 DHFRP00374 187 aa3.66□□□□□ -1.82
CLK3-219ENST00000567805 FGF2P09038 288 aa3.66□□□□□ -1.82
CLK3-219ENST00000567805 ZNF735P0CB33 412 aa3.66□□□□□ -1.82
CLK3-219ENST00000567805 PTHLHP12272 177 aa3.66□□□□□ -1.82
CLK3-219ENST00000567805 TGFBR1P36897 503 aa3.66□□□□□ -1.82
CLK3-219ENST00000567805 RPS19P39019 145 aaKnown RBP3.66□□□□□ -1.82
CLK3-219ENST00000567805 RPL27AP46776 148 aaKnown RBP3.66□□□□□ -1.82
CLK3-219ENST00000567805 SYNJ2BPP57105 145 aa3.66□□□□□ -1.82
CLK3-219ENST00000567805 TAS2R31P59538 309 aa3.66□□□□□ -1.82
CLK3-219ENST00000567805 FXYD4P59646 89 aa3.66□□□□□ -1.82
CLK3-219ENST00000567805 HERV-K104P61576 105 aa3.66□□□□□ -1.82
CLK3-219ENST00000567805 LSM3P62310 102 aaKnown RBP3.66□□□□□ -1.82
CLK3-219ENST00000567805 RHOGP84095 191 aa3.66□□□□□ -1.82
CLK3-219ENST00000567805 DEFA5Q01523 94 aa3.66□□□□□ -1.82
CLK3-219ENST00000567805 ZNF45Q02386 682 aa3.66□□□□□ -1.82
CLK3-219ENST00000567805 ATP5G2Q06055 141 aa3.66□□□□□ -1.82
CLK3-219ENST00000567805 CATR1Q13166 79 aa3.66□□□□□ -1.82
CLK3-219ENST00000567805 POU2AF1Q16633 256 aa3.66□□□□□ -1.82
CLK3-219ENST00000567805 TATDN3Q17R31 274 aa3.66□□□□□ -1.82
CLK3-219ENST00000567805 RPEL1Q2QD12 228 aa3.66□□□□□ -1.82
CLK3-219ENST00000567805 TMEM69Q5SWH9 247 aa3.66□□□□□ -1.82
CLK3-219ENST00000567805 C10orf55Q5SWW7 151 aa3.66□□□□□ -1.82
CLK3-219ENST00000567805 ZNF818PQ6ZRF7 136 aa3.66□□□□□ -1.82
CLK3-219ENST00000567805 ANKRD13BQ86YJ7 626 aa3.66□□□□□ -1.82
CLK3-219ENST00000567805 VKORC1L1Q8N0U8 176 aa3.66□□□□□ -1.82
CLK3-219ENST00000567805 SPAG16Q8N0X2 631 aa3.66□□□□□ -1.82
CLK3-219ENST00000567805 TTC9CQ8N5M4 171 aa3.66□□□□□ -1.82
CLK3-219ENST00000567805 SAMD12Q8N8I0 201 aa3.66□□□□□ -1.82
CLK3-219ENST00000567805 NECAP1Q8NC96 275 aa3.66□□□□□ -1.82
CLK3-219ENST00000567805 OR4A5Q8NH83 315 aa3.66□□□□□ -1.82
CLK3-219ENST00000567805 TMEM167AQ8TBQ9 72 aa3.66□□□□□ -1.82
CLK3-219ENST00000567805 SLC25A46Q96AG3 418 aa3.66□□□□□ -1.82
CLK3-219ENST00000567805 CMTM3Q96MX0 182 aa3.66□□□□□ -1.82
CLK3-219ENST00000567805 GPHA2Q96T91 129 aa3.66□□□□□ -1.82
CLK3-219ENST00000567805 KRTAP4-9Q9BYQ8 210 aa3.66□□□□□ -1.82
CLK3-219ENST00000567805 SLC5A7Q9GZV3 580 aa3.66□□□□□ -1.82
CLK3-219ENST00000567805 AKIP1Q9NQ31 210 aa3.66□□□□□ -1.82
CLK3-219ENST00000567805 CCL28Q9NRJ3 127 aa3.66□□□□□ -1.82
CLK3-219ENST00000567805 BET1LQ9NYM9 111 aa3.66□□□□□ -1.82
CLK3-219ENST00000567805 SIGLEC8Q9NYZ4 499 aa3.66□□□□□ -1.82
CLK3-219ENST00000567805 EHFQ9NZC4 300 aa3.66□□□□□ -1.82
CLK3-219ENST00000567805 PEMTQ9UBM1 199 aa3.66□□□□□ -1.82
CLK3-219ENST00000567805 ANAPC10Q9UM13 185 aa3.66□□□□□ -1.82
CLK3-219ENST00000567805 ZNF257Q9Y2Q1 563 aa3.66□□□□□ -1.82
CLK3-219ENST00000567805 U3KQK5 164 aa3.66□□□□□ -1.82
CLK3-219ENST00000567805 KMT2CQ8NEZ4 4911 aaKnown RBP3.66□□□□□ -1.82
CLK3-219ENST00000567805 SMIM31A0A1B0GVY4 71 aa3.65□□□□□ -1.83
CLK3-219ENST00000567805 DPPA5A6NC42 116 aa3.65□□□□□ -1.83
CLK3-219ENST00000567805 MEIS3P1A6NDR6 274 aa3.65□□□□□ -1.83
CLK3-219ENST00000567805 HMX3A6NHT5 357 aa3.65□□□□□ -1.83
CLK3-219ENST00000567805 E7EUB6 86 aa3.65□□□□□ -1.83
CLK3-219ENST00000567805 H0Y980 276 aa3.65□□□□□ -1.83
CLK3-219ENST00000567805 BMPR1BO00238 502 aa3.65□□□□□ -1.83
CLK3-219ENST00000567805 HPRT1P00492 218 aa3.65□□□□□ -1.83
CLK3-219ENST00000567805 TRBV12-3P01733 135 aa3.65□□□□□ -1.83
CLK3-219ENST00000567805 APOA1P02647 267 aa3.65□□□□□ -1.83
CLK3-219ENST00000567805 PRH1P02810 166 aa3.65□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 116 ms