RNA–Protein interactions for RNA: ENST00000567674.1

CDH3-206, Transcript of cadherin 3, humanhuman

TSL 3

Gene CDH3, Length 892 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3-206ENST00000567674 S100GP29377 79 aa8.6□□□□□ -1.03
CDH3-206ENST00000567674 PRSS3P35030 304 aa8.6□□□□□ -1.03
CDH3-206ENST00000567674 RORCP51449 518 aa8.6□□□□□ -1.03
CDH3-206ENST00000567674 TNXAQ16473 311 aa8.6□□□□□ -1.03
CDH3-206ENST00000567674 TMEM69Q5SWH9 247 aa8.6□□□□□ -1.03
CDH3-206ENST00000567674 CMTM1Q8IZ96 169 aa8.6□□□□□ -1.03
CDH3-206ENST00000567674 OR5T1Q8NG75 326 aa8.6□□□□□ -1.03
CDH3-206ENST00000567674 OR13F1Q8NGS4 319 aa8.6□□□□□ -1.03
CDH3-206ENST00000567674 TCTEX1D2Q8WW35 142 aa8.6□□□□□ -1.03
CDH3-206ENST00000567674 AP3S1Q92572 193 aa8.6□□□□□ -1.03
CDH3-206ENST00000567674 MS4A10Q96PG2 267 aa8.6□□□□□ -1.03
CDH3-206ENST00000567674 RNF167Q9H6Y7 350 aa8.6□□□□□ -1.03
CDH3-206ENST00000567674 IFT46Q9NQC8 304 aa8.6□□□□□ -1.03
CDH3-206ENST00000567674 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP8.59□□□□□ -1.03
CDH3-206ENST00000567674 SMIM30A4D0T7 59 aa8.59□□□□□ -1.03
CDH3-206ENST00000567674 MPPED1O15442 326 aa8.59□□□□□ -1.03
CDH3-206ENST00000567674 BRWD1-AS2P59051 145 aa8.59□□□□□ -1.03
CDH3-206ENST00000567674 RPL30P62888 115 aaKnown RBP8.59□□□□□ -1.03
CDH3-206ENST00000567674 RPL8P62917 257 aaKnown RBP8.59□□□□□ -1.03
CDH3-206ENST00000567674 ATP5G2Q06055 141 aa8.59□□□□□ -1.03
CDH3-206ENST00000567674 C11orf87Q6NUJ2 197 aa8.59□□□□□ -1.03
CDH3-206ENST00000567674 MZT2AQ6P582 158 aa8.59□□□□□ -1.03
CDH3-206ENST00000567674 LAX1Q8IWV1 398 aa8.59□□□□□ -1.03
CDH3-206ENST00000567674 GVQW1Q8N7I0 195 aa8.59□□□□□ -1.03
CDH3-206ENST00000567674 OR9G4Q8NGQ1 327 aa8.59□□□□□ -1.03
CDH3-206ENST00000567674 OR6F1Q8NGZ6 308 aa8.59□□□□□ -1.03
CDH3-206ENST00000567674 RBMXL1Q96E39 390 aaKnown RBP8.59□□□□□ -1.03
CDH3-206ENST00000567674 OR5B12Q96R08 314 aa8.59□□□□□ -1.03
CDH3-206ENST00000567674 FUNDC2Q9BWH2 189 aa8.59□□□□□ -1.03
CDH3-206ENST00000567674 COA4Q9NYJ1 87 aa8.59□□□□□ -1.03
CDH3-206ENST00000567674 THYN1Q9P016 225 aa8.59□□□□□ -1.03
CDH3-206ENST00000567674 RABL2AQ9UBK7 228 aaPredicted RBP8.59□□□□□ -1.03
CDH3-206ENST00000567674 RABL2BQ9UNT1 228 aa8.59□□□□□ -1.03
CDH3-206ENST00000567674 LGALS9O00182 355 aa8.58□□□□□ -1.04
CDH3-206ENST00000567674 GP9P14770 177 aa8.58□□□□□ -1.04
CDH3-206ENST00000567674 TBPP20226 339 aa8.58□□□□□ -1.04
CDH3-206ENST00000567674 GNRHRP30968 328 aa8.58□□□□□ -1.04
CDH3-206ENST00000567674 RPL27AP46776 148 aaKnown RBP8.58□□□□□ -1.04
CDH3-206ENST00000567674 SLURP1P55000 103 aa8.58□□□□□ -1.04
CDH3-206ENST00000567674 UCP3P55916 312 aa8.58□□□□□ -1.04
CDH3-206ENST00000567674 TAS2R20P59543 309 aa8.58□□□□□ -1.04
CDH3-206ENST00000567674 HERV-K104P61576 105 aa8.58□□□□□ -1.04
CDH3-206ENST00000567674 ANKRD13BQ86YJ7 626 aa8.58□□□□□ -1.04
CDH3-206ENST00000567674 SPAG16Q8N0X2 631 aa8.58□□□□□ -1.04
CDH3-206ENST00000567674 SAMD12Q8N8I0 201 aa8.58□□□□□ -1.04
CDH3-206ENST00000567674 OR1L6Q8NGR2 347 aa8.58□□□□□ -1.04
CDH3-206ENST00000567674 GPX8Q8TED1 209 aa8.58□□□□□ -1.04
CDH3-206ENST00000567674 SECTM1Q8WVN6 248 aa8.58□□□□□ -1.04
CDH3-206ENST00000567674 MOB3AQ96BX8 217 aa8.58□□□□□ -1.04
CDH3-206ENST00000567674 CXorf58Q96LI9 332 aa8.58□□□□□ -1.04
CDH3-206ENST00000567674 BCL7BQ9BQE9 202 aa8.58□□□□□ -1.04
CDH3-206ENST00000567674 SLC5A7Q9GZV3 580 aa8.58□□□□□ -1.04
CDH3-206ENST00000567674 FKBP11Q9NYL4 201 aa8.58□□□□□ -1.04
CDH3-206ENST00000567674 SORL1Q92673 2214 aa8.57□□□□□ -1.04
CDH3-206ENST00000567674 TRBV7-1A0A0A6YYK4 115 aa8.57□□□□□ -1.04
CDH3-206ENST00000567674 DPPA5A6NC42 116 aa8.57□□□□□ -1.04
CDH3-206ENST00000567674 IGHV3-11P01762 117 aa8.57□□□□□ -1.04
CDH3-206ENST00000567674 CTRB1P17538 263 aa8.57□□□□□ -1.04
CDH3-206ENST00000567674 HLA-GP17693 338 aa8.57□□□□□ -1.04
CDH3-206ENST00000567674 F2RP25116 425 aa8.57□□□□□ -1.04
CDH3-206ENST00000567674 PTBP1P26599 531 aaKnown RBP eCLIP8.57□□□□□ -1.04
CDH3-206ENST00000567674 PSMB6P28072 239 aa8.57□□□□□ -1.04
CDH3-206ENST00000567674 RHOGP84095 191 aa8.57□□□□□ -1.04
CDH3-206ENST00000567674 RPEL1Q2QD12 228 aa8.57□□□□□ -1.04
CDH3-206ENST00000567674 CTRB2Q6GPI1 263 aa8.57□□□□□ -1.04
CDH3-206ENST00000567674 LCN12Q6JVE5 192 aa8.57□□□□□ -1.04
CDH3-206ENST00000567674 GPHB5Q86YW7 130 aa8.57□□□□□ -1.04
CDH3-206ENST00000567674 Q8N402 240 aa8.57□□□□□ -1.04
CDH3-206ENST00000567674 OR5H2Q8NGV7 314 aa8.57□□□□□ -1.04
CDH3-206ENST00000567674 FYTTD1Q96QD9 318 aaKnown RBP8.57□□□□□ -1.04
CDH3-206ENST00000567674 TSC22D3Q99576 134 aa8.57□□□□□ -1.04
CDH3-206ENST00000567674 ALX4Q9H161 411 aaPredicted RBP8.57□□□□□ -1.04
CDH3-206ENST00000567674 CCL28Q9NRJ3 127 aa8.57□□□□□ -1.04
CDH3-206ENST00000567674 TAS2R8Q9NYW2 309 aa8.57□□□□□ -1.04
CDH3-206ENST00000567674 TNCP24821 2201 aa8.56□□□□□ -1.04
CDH3-206ENST00000567674 TEX22C9J3V5 150 aa8.56□□□□□ -1.04
CDH3-206ENST00000567674 GGCTO75223 188 aaKnown RBP8.56□□□□□ -1.04
CDH3-206ENST00000567674 GABARAPO95166 117 aa8.56□□□□□ -1.04
CDH3-206ENST00000567674 ZNF182P17025 639 aaPredicted RBP8.56□□□□□ -1.04
CDH3-206ENST00000567674 RCVRNP35243 200 aa8.56□□□□□ -1.04
CDH3-206ENST00000567674 MECP2P51608 486 aaKnown RBP8.56□□□□□ -1.04
CDH3-206ENST00000567674 SSBP1Q04837 148 aaKnown RBP8.56□□□□□ -1.04
CDH3-206ENST00000567674 IDO2Q6ZQW0 420 aa8.56□□□□□ -1.04
CDH3-206ENST00000567674 ZNF818PQ6ZRF7 136 aa8.56□□□□□ -1.04
CDH3-206ENST00000567674 ZNF486Q96H40 463 aaPredicted RBP8.56□□□□□ -1.04
CDH3-206ENST00000567674 COMMD5Q9GZQ3 224 aa8.56□□□□□ -1.04
CDH3-206ENST00000567674 AKIP1Q9NQ31 210 aa8.56□□□□□ -1.04
CDH3-206ENST00000567674 TECRQ9NZ01 308 aaKnown RBP8.56□□□□□ -1.04
CDH3-206ENST00000567674 EHFQ9NZC4 300 aa8.56□□□□□ -1.04
CDH3-206ENST00000567674 GPR31O00270 319 aa8.55□□□□□ -1.04
CDH3-206ENST00000567674 UPK2O00526 184 aa8.55□□□□□ -1.04
CDH3-206ENST00000567674 PGLYRP1O75594 196 aaPredicted RBP8.55□□□□□ -1.04
CDH3-206ENST00000567674 B3GALNT1O75752 331 aa8.55□□□□□ -1.04
CDH3-206ENST00000567674 RPA2P15927 270 aa8.55□□□□□ -1.04
CDH3-206ENST00000567674 SPNP16150 400 aa8.55□□□□□ -1.04
CDH3-206ENST00000567674 ERVK-16P61578 105 aa8.55□□□□□ -1.04
CDH3-206ENST00000567674 MRPS10P82664 201 aaKnown RBP8.55□□□□□ -1.04
CDH3-206ENST00000567674 OR4A47Q6IF82 309 aa8.55□□□□□ -1.04
CDH3-206ENST00000567674 IL34Q6ZMJ4 242 aa8.55□□□□□ -1.04
CDH3-206ENST00000567674 TMEM17Q86X19 198 aa8.55□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 76.6 ms