RNA–Protein interactions for RNA: ENST00000567635.5

SF3B3-209, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 5

Gene SF3B3, Length 630 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-209ENST00000567635 PRELID3BQ9Y3B1 194 aa5.35□□□□□ -1.55
SF3B3-209ENST00000567635 IGKV1D-13A0A0B4J2D9 117 aa5.34□□□□□ -1.55
SF3B3-209ENST00000567635 A0A0G2JLM5 398 aa5.34□□□□□ -1.55
SF3B3-209ENST00000567635 C13orf42A0A1B0GVH6 325 aa5.34□□□□□ -1.55
SF3B3-209ENST00000567635 TUSC2O75896 110 aa5.34□□□□□ -1.55
SF3B3-209ENST00000567635 BRI3O95415 125 aa5.34□□□□□ -1.55
SF3B3-209ENST00000567635 PTTG1O95997 202 aa5.34□□□□□ -1.55
SF3B3-209ENST00000567635 IGHV3-11P01762 117 aa5.34□□□□□ -1.55
SF3B3-209ENST00000567635 IGKV1-13P0DP09 117 aa5.34□□□□□ -1.55
SF3B3-209ENST00000567635 SLURP1P55000 103 aa5.34□□□□□ -1.55
SF3B3-209ENST00000567635 UBE2KP61086 200 aa5.34□□□□□ -1.55
SF3B3-209ENST00000567635 SSBP2P81877 361 aaPredicted RBP5.34□□□□□ -1.55
SF3B3-209ENST00000567635 CD69Q07108 199 aa5.34□□□□□ -1.55
SF3B3-209ENST00000567635 CDK10Q15131 360 aa5.34□□□□□ -1.55
SF3B3-209ENST00000567635 PRSS8Q16651 343 aa5.34□□□□□ -1.55
SF3B3-209ENST00000567635 MRGPRG-AS1Q2M3A8 158 aa5.34□□□□□ -1.55
SF3B3-209ENST00000567635 CCDC190Q86UF4 302 aa5.34□□□□□ -1.55
SF3B3-209ENST00000567635 HOGA1Q86XE5 327 aa5.34□□□□□ -1.55
SF3B3-209ENST00000567635 POC5Q8NA72 575 aa5.34□□□□□ -1.55
SF3B3-209ENST00000567635 BEST4Q8NFU0 473 aa5.34□□□□□ -1.55
SF3B3-209ENST00000567635 ACOT12Q8WYK0 555 aa5.34□□□□□ -1.55
SF3B3-209ENST00000567635 AP3S1Q92572 193 aa5.34□□□□□ -1.55
SF3B3-209ENST00000567635 SLC25A38Q96DW6 304 aa5.34□□□□□ -1.55
SF3B3-209ENST00000567635 S100A16Q96FQ6 103 aaKnown RBP5.34□□□□□ -1.55
SF3B3-209ENST00000567635 HSD17B10Q99714 261 aaKnown RBP5.34□□□□□ -1.55
SF3B3-209ENST00000567635 B9D2Q9BPU9 175 aa5.34□□□□□ -1.55
SF3B3-209ENST00000567635 C6orf62Q9GZU0 229 aaPredicted RBP5.34□□□□□ -1.55
SF3B3-209ENST00000567635 AUNIPQ9H7T9 357 aa5.34□□□□□ -1.55
SF3B3-209ENST00000567635 IGHV4OR15-8A0A075B7B6 117 aa5.33□□□□□ -1.56
SF3B3-209ENST00000567635 A0A087WW49 117 aa5.33□□□□□ -1.56
SF3B3-209ENST00000567635 CENPXA8MT69 81 aa5.33□□□□□ -1.56
SF3B3-209ENST00000567635 XRCC3O43542 346 aa5.33□□□□□ -1.56
SF3B3-209ENST00000567635 FCGR3BO75015 233 aa5.33□□□□□ -1.56
SF3B3-209ENST00000567635 SAP30O75446 220 aa5.33□□□□□ -1.56
SF3B3-209ENST00000567635 CCNKO75909 580 aa5.33□□□□□ -1.56
SF3B3-209ENST00000567635 ACTL6BO94805 426 aa5.33□□□□□ -1.56
SF3B3-209ENST00000567635 IGLV2-14P01704 120 aa5.33□□□□□ -1.56
SF3B3-209ENST00000567635 APOA1P02647 267 aa5.33□□□□□ -1.56
SF3B3-209ENST00000567635 TRAPPC2P0DI81 140 aa5.33□□□□□ -1.56
SF3B3-209ENST00000567635 TRAPPC2BP0DI82 140 aa5.33□□□□□ -1.56
SF3B3-209ENST00000567635 AADACP22760 399 aa5.33□□□□□ -1.56
SF3B3-209ENST00000567635 FCGR2CP31995 323 aa5.33□□□□□ -1.56
SF3B3-209ENST00000567635 CBX5P45973 191 aa5.33□□□□□ -1.56
SF3B3-209ENST00000567635 DEFA1P59665 94 aa5.33□□□□□ -1.56
SF3B3-209ENST00000567635 DEFA3P59666 94 aa5.33□□□□□ -1.56
SF3B3-209ENST00000567635 RPL30P62888 115 aaKnown RBP5.33□□□□□ -1.56
SF3B3-209ENST00000567635 TNXAQ16473 311 aa5.33□□□□□ -1.56
SF3B3-209ENST00000567635 ZFP69Q49AA0 526 aa5.33□□□□□ -1.56
SF3B3-209ENST00000567635 VAX1Q5SQQ9 334 aa5.33□□□□□ -1.56
SF3B3-209ENST00000567635 ACSM6Q6P461 480 aa5.33□□□□□ -1.56
SF3B3-209ENST00000567635 KCTD9Q7L273 389 aa5.33□□□□□ -1.56
SF3B3-209ENST00000567635 OVCH2Q7RTZ1 564 aa5.33□□□□□ -1.56
SF3B3-209ENST00000567635 GVQW1Q8N7I0 195 aa5.33□□□□□ -1.56
SF3B3-209ENST00000567635 LINC00469Q8N7U9 141 aa5.33□□□□□ -1.56
SF3B3-209ENST00000567635 TCTEX1D2Q8WW35 142 aa5.33□□□□□ -1.56
SF3B3-209ENST00000567635 USMG5Q96IX5 58 aa5.33□□□□□ -1.56
SF3B3-209ENST00000567635 PRR25Q96S07 402 aa5.33□□□□□ -1.56
SF3B3-209ENST00000567635 PHB2Q99623 299 aa5.33□□□□□ -1.56
SF3B3-209ENST00000567635 SOSTQ9BQB4 213 aa5.33□□□□□ -1.56
SF3B3-209ENST00000567635 TINAGL1Q9GZM7 467 aaPredicted RBP5.33□□□□□ -1.56
SF3B3-209ENST00000567635 MIXL1Q9H2W2 232 aa5.33□□□□□ -1.56
SF3B3-209ENST00000567635 ZNF430Q9H8G1 570 aaPredicted RBP5.33□□□□□ -1.56
SF3B3-209ENST00000567635 RANGRFQ9HD47 186 aaPredicted RBP5.33□□□□□ -1.56
SF3B3-209ENST00000567635 COA4Q9NYJ1 87 aa5.33□□□□□ -1.56
SF3B3-209ENST00000567635 ZNF256Q9Y2P7 627 aaPredicted RBP5.33□□□□□ -1.56
SF3B3-209ENST00000567635 MRPS7Q9Y2R9 242 aaKnown RBP5.33□□□□□ -1.56
SF3B3-209ENST00000567635 LSM4Q9Y4Z0 139 aaKnown RBP5.33□□□□□ -1.56
SF3B3-209ENST00000567635 MPPED1O15442 326 aa5.32□□□□□ -1.56
SF3B3-209ENST00000567635 RGS5O15539 181 aa5.32□□□□□ -1.56
SF3B3-209ENST00000567635 CREBL2O60519 120 aaPredicted RBP5.32□□□□□ -1.56
SF3B3-209ENST00000567635 OR2A4O95047 310 aa5.32□□□□□ -1.56
SF3B3-209ENST00000567635 LY86O95711 162 aa5.32□□□□□ -1.56
SF3B3-209ENST00000567635 HRASP01112 189 aa5.32□□□□□ -1.56
SF3B3-209ENST00000567635 OR9G9P0C7N8 305 aa5.32□□□□□ -1.56
SF3B3-209ENST00000567635 NHLRC4P0CG21 123 aaPredicted RBP5.32□□□□□ -1.56
SF3B3-209ENST00000567635 APELAP0DMC3 54 aa5.32□□□□□ -1.56
SF3B3-209ENST00000567635 PTHLHP12272 177 aa5.32□□□□□ -1.56
SF3B3-209ENST00000567635 ZP3P21754 424 aa5.32□□□□□ -1.56
SF3B3-209ENST00000567635 PTBP1P26599 531 aaKnown RBP eCLIP5.32□□□□□ -1.56
SF3B3-209ENST00000567635 EIF4EBP1Q13541 118 aaPredicted RBP5.32□□□□□ -1.56
SF3B3-209ENST00000567635 MSMO1Q15800 293 aa5.32□□□□□ -1.56
SF3B3-209ENST00000567635 OR2B11Q5JQS5 317 aa5.32□□□□□ -1.56
SF3B3-209ENST00000567635 UBE2NLQ5JXB2 153 aa5.32□□□□□ -1.56
SF3B3-209ENST00000567635 SPANXN2Q5MJ10 180 aa5.32□□□□□ -1.56
SF3B3-209ENST00000567635 ZNF343Q6P1L6 599 aa5.32□□□□□ -1.56
SF3B3-209ENST00000567635 ZNF66Q6ZN08 573 aa5.32□□□□□ -1.56
SF3B3-209ENST00000567635 MMD2Q8IY49 270 aa5.32□□□□□ -1.56
SF3B3-209ENST00000567635 VKORC1L1Q8N0U8 176 aa5.32□□□□□ -1.56
SF3B3-209ENST00000567635 SAMD12Q8N8I0 201 aa5.32□□□□□ -1.56
SF3B3-209ENST00000567635 ZBTB34Q8NCN2 500 aa5.32□□□□□ -1.56
SF3B3-209ENST00000567635 ADAD2Q8NCV1 583 aaKnown RBP5.32□□□□□ -1.56
SF3B3-209ENST00000567635 OR5AP2Q8NGF4 316 aa5.32□□□□□ -1.56
SF3B3-209ENST00000567635 OR4S2Q8NH73 311 aa5.32□□□□□ -1.56
SF3B3-209ENST00000567635 SECTM1Q8WVN6 248 aa5.32□□□□□ -1.56
SF3B3-209ENST00000567635 SRSF12Q8WXF0 261 aaKnown RBP5.32□□□□□ -1.56
SF3B3-209ENST00000567635 CMTM3Q96MX0 182 aa5.32□□□□□ -1.56
SF3B3-209ENST00000567635 OR2A7Q96R45 310 aa5.32□□□□□ -1.56
SF3B3-209ENST00000567635 OR4C12Q96R67 309 aa5.32□□□□□ -1.56
SF3B3-209ENST00000567635 SPIN2AQ99865 258 aa5.32□□□□□ -1.56
SF3B3-209ENST00000567635 SPIN2BQ9BPZ2 258 aa5.32□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 80.6 ms