RNA–Protein interactions for RNA: ENST00000566843.1

COMMD4-215, Transcript of COMM domain containing 4, humanhuman

TSL 2

Gene COMMD4, Length 2,284 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-215ENST00000566843 USF3Q68DE3 2245 aa13.04□□□□□ -0.32
COMMD4-215ENST00000566843 TRGV10A0A0A0MS01 117 aa13.04□□□□□ -0.32
COMMD4-215ENST00000566843 SLC17A3O00476 420 aa13.04□□□□□ -0.32
COMMD4-215ENST00000566843 FCN1O00602 326 aa13.04□□□□□ -0.32
COMMD4-215ENST00000566843 OR9G9P0C7N8 305 aa13.04□□□□□ -0.32
COMMD4-215ENST00000566843 HNF1AP20823 631 aa13.04□□□□□ -0.32
COMMD4-215ENST00000566843 RPP30P78346 268 aaKnown RBP13.04□□□□□ -0.32
COMMD4-215ENST00000566843 DCAF12Q5T6F0 453 aa13.04□□□□□ -0.32
COMMD4-215ENST00000566843 SLC45A2Q9UMX9 530 aa13.04□□□□□ -0.32
COMMD4-215ENST00000566843 A8MXE2 369 aa13.03□□□□□ -0.32
COMMD4-215ENST00000566843 GCHFRP30047 84 aa13.03□□□□□ -0.32
COMMD4-215ENST00000566843 RAB7AP51149 207 aa13.03□□□□□ -0.32
COMMD4-215ENST00000566843 OR5I1Q13606 314 aa13.03□□□□□ -0.32
COMMD4-215ENST00000566843 OR1C1Q15619 314 aa13.03□□□□□ -0.32
COMMD4-215ENST00000566843 RPEL1Q2QD12 228 aa13.03□□□□□ -0.32
COMMD4-215ENST00000566843 C1orf174Q8IYL3 243 aa13.03□□□□□ -0.32
COMMD4-215ENST00000566843 SIGLECL1Q8N7X8 197 aa13.03□□□□□ -0.32
COMMD4-215ENST00000566843 ZNF586Q9NXT0 402 aa13.03□□□□□ -0.32
COMMD4-215ENST00000566843 V9GYV3 84 aa13.03□□□□□ -0.32
COMMD4-215ENST00000566843 YLPM1P49750 1951 aaKnown RBP13.03□□□□□ -0.32
COMMD4-215ENST00000566843 J3QW42 95 aa13.02□□□□□ -0.32
COMMD4-215ENST00000566843 NTN3O00634 580 aaPredicted RBP13.02□□□□□ -0.32
COMMD4-215ENST00000566843 VDAC2P45880 294 aaPredicted RBP13.02□□□□□ -0.32
COMMD4-215ENST00000566843 IER3P46695 156 aa13.02□□□□□ -0.32
COMMD4-215ENST00000566843 RPL31P62899 125 aaKnown RBP13.02□□□□□ -0.32
COMMD4-215ENST00000566843 DMRTA1Q5VZB9 504 aa13.02□□□□□ -0.32
COMMD4-215ENST00000566843 MIC13Q5XKP0 118 aa13.02□□□□□ -0.32
COMMD4-215ENST00000566843 NINJ1Q92982 152 aa13.02□□□□□ -0.32
COMMD4-215ENST00000566843 EAF1Q96JC9 268 aaPredicted RBP13.02□□□□□ -0.32
COMMD4-215ENST00000566843 MS4A5Q9H3V2 200 aa13.02□□□□□ -0.32
COMMD4-215ENST00000566843 GNB4Q9HAV0 340 aa13.02□□□□□ -0.32
COMMD4-215ENST00000566843 SNURFLB1AK76 121 aa13.02□□□□□ -0.33
COMMD4-215ENST00000566843 OTX2P32243 289 aa13.02□□□□□ -0.33
COMMD4-215ENST00000566843 CEBPDP49716 269 aaPredicted RBP13.02□□□□□ -0.33
COMMD4-215ENST00000566843 BATFQ16520 125 aa13.02□□□□□ -0.33
COMMD4-215ENST00000566843 PDLIM3Q53GG5 364 aaPredicted RBP13.02□□□□□ -0.33
COMMD4-215ENST00000566843 FBXW9Q5XUX1 488 aa13.02□□□□□ -0.33
COMMD4-215ENST00000566843 MMD2Q8IY49 270 aa13.02□□□□□ -0.33
COMMD4-215ENST00000566843 OR52E5Q8NH55 327 aa13.02□□□□□ -0.33
COMMD4-215ENST00000566843 BCL2L2Q92843 193 aaPredicted RBP13.02□□□□□ -0.33
COMMD4-215ENST00000566843 ZNF891A8MT65 544 aaPredicted RBP13.01□□□□□ -0.33
COMMD4-215ENST00000566843 DIRC3C9JPN6 131 aa13.01□□□□□ -0.33
COMMD4-215ENST00000566843 AQP7O14520 342 aa13.01□□□□□ -0.33
COMMD4-215ENST00000566843 CELA3AP09093 270 aa13.01□□□□□ -0.33
COMMD4-215ENST00000566843 OR10J4P0C629 311 aa13.01□□□□□ -0.33
COMMD4-215ENST00000566843 FRMD6-AS1P0C7T7 363 aa13.01□□□□□ -0.33
COMMD4-215ENST00000566843 AREGP15514 252 aa13.01□□□□□ -0.33
COMMD4-215ENST00000566843 OR10J3Q5JRS4 329 aa13.01□□□□□ -0.33
COMMD4-215ENST00000566843 COQ2Q96H96 371 aa13.01□□□□□ -0.33
COMMD4-215ENST00000566843 FAM173AQ9BQD7 235 aa13.01□□□□□ -0.33
COMMD4-215ENST00000566843 LSM4Q9Y4Z0 139 aaKnown RBP13.01□□□□□ -0.33
COMMD4-215ENST00000566843 PTPRBP23467 1997 aa13.01□□□□□ -0.33
COMMD4-215ENST00000566843 SIAH2O43255 324 aa13.01□□□□□ -0.33
COMMD4-215ENST00000566843 CER1O95813 267 aa13.01□□□□□ -0.33
COMMD4-215ENST00000566843 MT-ND6P03923 174 aa13.01□□□□□ -0.33
COMMD4-215ENST00000566843 REG1AP05451 166 aa13.01□□□□□ -0.33
COMMD4-215ENST00000566843 GNG10P50151 68 aa13.01□□□□□ -0.33
COMMD4-215ENST00000566843 GABRA6Q16445 453 aa13.01□□□□□ -0.33
COMMD4-215ENST00000566843 MDP1Q86V88 176 aa13.01□□□□□ -0.33
COMMD4-215ENST00000566843 C1orf159Q96HA4 380 aa13.01□□□□□ -0.33
COMMD4-215ENST00000566843 SLC35E1Q96K37 410 aa13.01□□□□□ -0.33
COMMD4-215ENST00000566843 CHRNB4P30926 498 aa13□□□□□ -0.33
COMMD4-215ENST00000566843 TFPI2P48307 235 aa13□□□□□ -0.33
COMMD4-215ENST00000566843 LINC00205P59089 165 aa13□□□□□ -0.33
COMMD4-215ENST00000566843 AESQ08117 197 aa13□□□□□ -0.33
COMMD4-215ENST00000566843 COX19Q49B96 90 aa13□□□□□ -0.33
COMMD4-215ENST00000566843 WDR73Q6P4I2 378 aa13□□□□□ -0.33
COMMD4-215ENST00000566843 TMPRSS7Q7RTY8 843 aa13□□□□□ -0.33
COMMD4-215ENST00000566843 C11orf42Q8N5U0 333 aa13□□□□□ -0.33
COMMD4-215ENST00000566843 ST6GALNAC3Q8NDV1 305 aa13□□□□□ -0.33
COMMD4-215ENST00000566843 UHRF2Q96PU4 802 aa13□□□□□ -0.33
COMMD4-215ENST00000566843 UQCR10Q9UDW1 63 aa13□□□□□ -0.33
COMMD4-215ENST00000566843 PCSK5Q92824 1860 aa13□□□□□ -0.33
COMMD4-215ENST00000566843 KRTDAPP60985 99 aa13□□□□□ -0.33
COMMD4-215ENST00000566843 FOXF2Q12947 444 aa13□□□□□ -0.33
COMMD4-215ENST00000566843 SAPCD1Q5SSQ6 148 aa13□□□□□ -0.33
COMMD4-215ENST00000566843 SPINK14Q6IE38 97 aa13□□□□□ -0.33
COMMD4-215ENST00000566843 PRR7Q8TB68 274 aa13□□□□□ -0.33
COMMD4-215ENST00000566843 NANOS1Q8WY41 292 aaKnown RBP13□□□□□ -0.33
COMMD4-215ENST00000566843 NRN1Q9NPD7 142 aa13□□□□□ -0.33
COMMD4-215ENST00000566843 TBL2Q9Y4P3 447 aaKnown RBP13□□□□□ -0.33
COMMD4-215ENST00000566843 ARL2-SNX15V9GYD0 113 aa13□□□□□ -0.33
COMMD4-215ENST00000566843 MT-CO2P00403 227 aa12.99□□□□□ -0.33
COMMD4-215ENST00000566843 CX3CL1P78423 397 aa12.99□□□□□ -0.33
COMMD4-215ENST00000566843 SPATA45Q537H7 98 aa12.99□□□□□ -0.33
COMMD4-215ENST00000566843 MRGPRDQ8TDS7 321 aa12.99□□□□□ -0.33
COMMD4-215ENST00000566843 DNAJC4Q9NNZ3 241 aa12.99□□□□□ -0.33
COMMD4-215ENST00000566843 GFRA3O60609 400 aa12.99□□□□□ -0.33
COMMD4-215ENST00000566843 SMPD2O60906 423 aa12.99□□□□□ -0.33
COMMD4-215ENST00000566843 ZNF253O75346 499 aa12.99□□□□□ -0.33
COMMD4-215ENST00000566843 NDUFB8O95169 186 aa12.99□□□□□ -0.33
COMMD4-215ENST00000566843 IGLC2P0DOY2 106 aa12.99□□□□□ -0.33
COMMD4-215ENST00000566843 IGLC3P0DOY3 106 aa12.99□□□□□ -0.33
COMMD4-215ENST00000566843 RHOBP62745 196 aa12.99□□□□□ -0.33
COMMD4-215ENST00000566843 SUMO1P63165 101 aaKnown RBP12.99□□□□□ -0.33
COMMD4-215ENST00000566843 RPL19P84098 196 aaKnown RBP12.99□□□□□ -0.33
COMMD4-215ENST00000566843 MMDQ15546 238 aa12.99□□□□□ -0.33
COMMD4-215ENST00000566843 TBC1D28Q2M2D7 210 aa12.99□□□□□ -0.33
COMMD4-215ENST00000566843 TMEM136Q6ZRR5 245 aa12.99□□□□□ -0.33
COMMD4-215ENST00000566843 OR8I2Q8N0Y5 310 aa12.99□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms