RNA–Protein interactions for RNA: ENST00000566549.5

MSLN-207, Transcript of mesothelin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene MSLN, Length 2,418 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSLN-207ENST00000566549 ZCCHC14Q8WYQ9 949 aaKnown RBP15.36■□□□□ 0.05
MSLN-207ENST00000566549 YPEL4Q96NS1 127 aa15.36■□□□□ 0.05
MSLN-207ENST00000566549 ACTR3CQ9C0K3 210 aaPredicted RBP15.36■□□□□ 0.05
MSLN-207ENST00000566549 NCOR1P1Q9H4R4 102 aa15.36■□□□□ 0.05
MSLN-207ENST00000566549 KLF2Q9Y5W3 355 aaPredicted RBP15.36■□□□□ 0.05
MSLN-207ENST00000566549 HCFC1P51610 2035 aa15.36■□□□□ 0.05
MSLN-207ENST00000566549 TRAV38-1A0A0B4J264 116 aa15.36■□□□□ 0.05
MSLN-207ENST00000566549 NKX6-3A6NJ46 265 aa15.36■□□□□ 0.05
MSLN-207ENST00000566549 PCP4L1A6NKN8 68 aa15.36■□□□□ 0.05
MSLN-207ENST00000566549 C17orf112F2Z3M2 114 aa15.36■□□□□ 0.05
MSLN-207ENST00000566549 K7ENP7 123 aa15.36■□□□□ 0.05
MSLN-207ENST00000566549 MBP02144 154 aa15.36■□□□□ 0.05
MSLN-207ENST00000566549 IGKV1-16P04430 117 aa15.36■□□□□ 0.05
MSLN-207ENST00000566549 RPS10P46783 165 aaKnown RBP15.36■□□□□ 0.05
MSLN-207ENST00000566549 MEF2BQ02080 365 aaPredicted RBP15.36■□□□□ 0.05
MSLN-207ENST00000566549 Q8WTZ3 238 aa15.36■□□□□ 0.05
MSLN-207ENST00000566549 JKAMPQ9P055 326 aa15.36■□□□□ 0.05
MSLN-207ENST00000566549 C15orf61A6NNL5 157 aa15.35■□□□□ 0.05
MSLN-207ENST00000566549 THBS3P49746 956 aa15.35■□□□□ 0.05
MSLN-207ENST00000566549 RPL31P62899 125 aaKnown RBP15.35■□□□□ 0.05
MSLN-207ENST00000566549 RBMS3Q6XE24 437 aaKnown RBP15.35■□□□□ 0.05
MSLN-207ENST00000566549 Q8N7P7 452 aa15.35■□□□□ 0.05
MSLN-207ENST00000566549 FAM216AQ8WUB2 273 aa15.35■□□□□ 0.05
MSLN-207ENST00000566549 RPUSD4Q96CM3 377 aaKnown RBP15.35■□□□□ 0.05
MSLN-207ENST00000566549 RPUSD1Q9UJJ7 312 aaKnown RBP15.35■□□□□ 0.05
MSLN-207ENST00000566549 WDR83OSQ9Y284 106 aa15.35■□□□□ 0.05
MSLN-207ENST00000566549 SSUH2Q9Y2M2 353 aa15.35■□□□□ 0.05
MSLN-207ENST00000566549 ZNF835Q9Y2P0 537 aa15.35■□□□□ 0.05
MSLN-207ENST00000566549 hADV38S2A0JD32 116 aa15.35■□□□□ 0.05
MSLN-207ENST00000566549 ITGB1BP1O14713 200 aa15.35■□□□□ 0.05
MSLN-207ENST00000566549 CXCL1P09341 107 aa15.35■□□□□ 0.05
MSLN-207ENST00000566549 MDKP21741 143 aaPredicted RBP15.35■□□□□ 0.05
MSLN-207ENST00000566549 RPP30P78346 268 aaKnown RBP15.35■□□□□ 0.05
MSLN-207ENST00000566549 HEPN1Q6WQI6 88 aa15.35■□□□□ 0.05
MSLN-207ENST00000566549 OR52E5Q8NH55 327 aa15.35■□□□□ 0.05
MSLN-207ENST00000566549 MS4A5Q9H3V2 200 aa15.35■□□□□ 0.05
MSLN-207ENST00000566549 PATZ1Q9HBE1 687 aaKnown RBP15.35■□□□□ 0.05
MSLN-207ENST00000566549 SPTA1P02549 2419 aa15.35■□□□□ 0.05
MSLN-207ENST00000566549 TGIF2-C20orf24A0A0A6YYL0 155 aa15.34■□□□□ 0.05
MSLN-207ENST00000566549 FCN3O75636 299 aa15.34■□□□□ 0.05
MSLN-207ENST00000566549 ELOBQ15370 118 aa15.34■□□□□ 0.05
MSLN-207ENST00000566549 H1FXQ92522 213 aaKnown RBP15.34■□□□□ 0.05
MSLN-207ENST00000566549 P2RX4Q99571 388 aa15.34■□□□□ 0.05
MSLN-207ENST00000566549 PTPRQQ9UMZ3 2332 aa15.34■□□□□ 0.05
MSLN-207ENST00000566549 YLPM1P49750 1951 aaKnown RBP15.34■□□□□ 0.05
MSLN-207ENST00000566549 CT45A6P0DMU7 189 aa15.34■□□□□ 0.05
MSLN-207ENST00000566549 CT45A5P0DMU8 189 aa15.34■□□□□ 0.05
MSLN-207ENST00000566549 CT45A7P0DMV0 189 aa15.34■□□□□ 0.05
MSLN-207ENST00000566549 PSMB3P49720 205 aa15.34■□□□□ 0.05
MSLN-207ENST00000566549 TREML4Q6UXN2 200 aa15.34■□□□□ 0.05
MSLN-207ENST00000566549 ZNF436-AS1Q8NC38 126 aaPredicted RBP15.34■□□□□ 0.05
MSLN-207ENST00000566549 IGF2RP11717 2491 aa15.33■□□□□ 0.05
MSLN-207ENST00000566549 A0A087WWC5 75 aa15.33■□□□□ 0.04
MSLN-207ENST00000566549 CDC34P49427 236 aaPredicted RBP15.33■□□□□ 0.04
MSLN-207ENST00000566549 LYPD2Q6UXB3 125 aa15.33■□□□□ 0.04
MSLN-207ENST00000566549 SLC25A48Q6ZT89 311 aaKnown RBP15.33■□□□□ 0.04
MSLN-207ENST00000566549 OR4F5Q8NH21 305 aa15.33■□□□□ 0.04
MSLN-207ENST00000566549 OR4F4Q96R69 305 aa15.33■□□□□ 0.04
MSLN-207ENST00000566549 SMIM7Q9BQ49 75 aa15.33■□□□□ 0.04
MSLN-207ENST00000566549 GAB2Q9UQC2 676 aa15.33■□□□□ 0.04
MSLN-207ENST00000566549 PPIAL4EA0A075B759 164 aa15.33■□□□□ 0.04
MSLN-207ENST00000566549 TRGV8A0A0C4DH27 118 aa15.33■□□□□ 0.04
MSLN-207ENST00000566549 PPIAL4DF5H284 164 aa15.33■□□□□ 0.04
MSLN-207ENST00000566549 PPIAL4FP0DN26 164 aa15.33■□□□□ 0.04
MSLN-207ENST00000566549 REG1BP48304 166 aa15.33■□□□□ 0.04
MSLN-207ENST00000566549 ACOT6Q3I5F7 207 aaPredicted RBP15.33■□□□□ 0.04
MSLN-207ENST00000566549 WDR25Q64LD2 544 aaPredicted RBP15.33■□□□□ 0.04
MSLN-207ENST00000566549 DYNLRB1Q9NP97 96 aa15.33■□□□□ 0.04
MSLN-207ENST00000566549 PPIAL4AQ9Y536 164 aa15.33■□□□□ 0.04
MSLN-207ENST00000566549 LINC00312Q9Y6C7 94 aa15.33■□□□□ 0.04
MSLN-207ENST00000566549 DSCAML1Q8TD84 2053 aa15.32■□□□□ 0.04
MSLN-207ENST00000566549 SRRM4A7MD48 611 aaKnown RBP15.32■□□□□ 0.04
MSLN-207ENST00000566549 TMEM178BH3BS89 294 aa15.32■□□□□ 0.04
MSLN-207ENST00000566549 CYB5BO43169 146 aa15.32■□□□□ 0.04
MSLN-207ENST00000566549 PAGE4O60829 102 aa15.32■□□□□ 0.04
MSLN-207ENST00000566549 MIC13Q5XKP0 118 aa15.32■□□□□ 0.04
MSLN-207ENST00000566549 OR13D1Q8NGV5 346 aa15.32■□□□□ 0.04
MSLN-207ENST00000566549 SSMEM1Q8WWF3 244 aa15.32■□□□□ 0.04
MSLN-207ENST00000566549 CORO2AQ92828 525 aa15.32■□□□□ 0.04
MSLN-207ENST00000566549 DIRC2Q96SL1 478 aa15.32■□□□□ 0.04
MSLN-207ENST00000566549 SSX3Q99909 188 aa15.32■□□□□ 0.04
MSLN-207ENST00000566549 SDF2L1Q9HCN8 221 aa15.32■□□□□ 0.04
MSLN-207ENST00000566549 SLC35D1Q9NTN3 355 aa15.32■□□□□ 0.04
MSLN-207ENST00000566549 PRSS46E5RG02 174 aa15.32■□□□□ 0.04
MSLN-207ENST00000566549 ADIRFQ15847 76 aa15.32■□□□□ 0.04
MSLN-207ENST00000566549 MGST2Q99735 147 aa15.32■□□□□ 0.04
MSLN-207ENST00000566549 ENY2Q9NPA8 101 aa15.32■□□□□ 0.04
MSLN-207ENST00000566549 TMEM14BQ9NUH8 114 aa15.32■□□□□ 0.04
MSLN-207ENST00000566549 OR51B2Q9Y5P1 312 aa15.32■□□□□ 0.04
MSLN-207ENST00000566549 TET2Q6N021 2002 aaPredicted RBP15.31■□□□□ 0.04
MSLN-207ENST00000566549 C5orf52A6NGY3 159 aa15.31■□□□□ 0.04
MSLN-207ENST00000566549 COL8A2P25067 703 aa15.31■□□□□ 0.04
MSLN-207ENST00000566549 UBE2G2P60604 165 aa15.31■□□□□ 0.04
MSLN-207ENST00000566549 FABP9Q0Z7S8 132 aa15.31■□□□□ 0.04
MSLN-207ENST00000566549 TMEM106BQ9NUM4 274 aa15.31■□□□□ 0.04
MSLN-207ENST00000566549 E7EQL1 145 aa15.31■□□□□ 0.04
MSLN-207ENST00000566549 CA2P00918 260 aa15.31■□□□□ 0.04
MSLN-207ENST00000566549 NPY1RP25929 384 aa15.31■□□□□ 0.04
MSLN-207ENST00000566549 HSPE1P61604 102 aaKnown RBP15.31■□□□□ 0.04
MSLN-207ENST00000566549 PDLIM3Q53GG5 364 aaPredicted RBP15.31■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 64.8 ms