RNA–Protein interactions for RNA: ENST00000566510.5

CDH1-209, Transcript of cadherin 1, humanhuman

TSL 5

Gene CDH1, Length 2,661 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-209ENST00000566510 SCO2A0A1W2PP80 73 aa11.8□□□□□ -0.52
CDH1-209ENST00000566510 AQP7O14520 342 aa11.8□□□□□ -0.52
CDH1-209ENST00000566510 SNRPCP09234 159 aaKnown RBP11.8□□□□□ -0.52
CDH1-209ENST00000566510 COL8A2P25067 703 aa11.8□□□□□ -0.52
CDH1-209ENST00000566510 THBS3P49746 956 aa11.8□□□□□ -0.52
CDH1-209ENST00000566510 ZNF134P52741 427 aa11.8□□□□□ -0.52
CDH1-209ENST00000566510 TCF23Q7RTU1 214 aa11.8□□□□□ -0.52
CDH1-209ENST00000566510 Q8TCH9 128 aa11.8□□□□□ -0.52
CDH1-209ENST00000566510 DIRC2Q96SL1 478 aa11.8□□□□□ -0.52
CDH1-209ENST00000566510 HINT2Q9BX68 163 aa11.8□□□□□ -0.52
CDH1-209ENST00000566510 ZNF891A8MT65 544 aaPredicted RBP11.8□□□□□ -0.52
CDH1-209ENST00000566510 A8MWP6 167 aa11.8□□□□□ -0.52
CDH1-209ENST00000566510 RBFOX2O43251 390 aaKnown RBP eCLIP11.8□□□□□ -0.52
CDH1-209ENST00000566510 KITLGP21583 273 aa11.8□□□□□ -0.52
CDH1-209ENST00000566510 PDLIM4P50479 330 aa11.8□□□□□ -0.52
CDH1-209ENST00000566510 LCN2P80188 198 aa11.8□□□□□ -0.52
CDH1-209ENST00000566510 TMEM140Q9NV12 185 aa11.8□□□□□ -0.52
CDH1-209ENST00000566510 LAMA5O15230 3695 aa11.79□□□□□ -0.52
CDH1-209ENST00000566510 IGKV1D-17A0A075B6S4 117 aa11.79□□□□□ -0.52
CDH1-209ENST00000566510 NKX2-8O15522 239 aa11.79□□□□□ -0.52
CDH1-209ENST00000566510 TYMSP04818 313 aa11.79□□□□□ -0.52
CDH1-209ENST00000566510 OPRK1P41145 380 aa11.79□□□□□ -0.52
CDH1-209ENST00000566510 TRAT1Q6PIZ9 186 aa11.79□□□□□ -0.52
CDH1-209ENST00000566510 MISP3Q96FF7 219 aa11.79□□□□□ -0.52
CDH1-209ENST00000566510 TNCP24821 2201 aa11.79□□□□□ -0.52
CDH1-209ENST00000566510 TRBV20OR9-2A0A075B6H5 130 aa11.79□□□□□ -0.52
CDH1-209ENST00000566510 IGHV2OR16-5A0A0B4J2B6 119 aa11.79□□□□□ -0.52
CDH1-209ENST00000566510 GFRA3O60609 400 aa11.79□□□□□ -0.52
CDH1-209ENST00000566510 MPDU1O75352 247 aa11.79□□□□□ -0.52
CDH1-209ENST00000566510 CXorf1O96002 111 aa11.79□□□□□ -0.52
CDH1-209ENST00000566510 OR4A8P0C604 315 aa11.79□□□□□ -0.52
CDH1-209ENST00000566510 NDUFB7P17568 137 aa11.79□□□□□ -0.52
CDH1-209ENST00000566510 SRSF6Q13247 344 aaKnown RBP11.79□□□□□ -0.52
CDH1-209ENST00000566510 VHLLQ6RSH7 139 aa11.79□□□□□ -0.52
CDH1-209ENST00000566510 LRP11Q86VZ4 500 aa11.79□□□□□ -0.52
CDH1-209ENST00000566510 TMEM256Q8N2U0 113 aa11.79□□□□□ -0.52
CDH1-209ENST00000566510 FDCSPQ8NFU4 85 aa11.79□□□□□ -0.52
CDH1-209ENST00000566510 RAB1CQ92928 201 aa11.79□□□□□ -0.52
CDH1-209ENST00000566510 GGTLC1Q9BX51 225 aa11.79□□□□□ -0.52
CDH1-209ENST00000566510 OPN3Q9H1Y3 402 aaPredicted RBP11.79□□□□□ -0.52
CDH1-209ENST00000566510 TMPRSS2O15393 492 aa11.78□□□□□ -0.52
CDH1-209ENST00000566510 SP9P0CG40 484 aa11.78□□□□□ -0.52
CDH1-209ENST00000566510 IGHV1-18A0A0C4DH31 117 aa11.78□□□□□ -0.52
CDH1-209ENST00000566510 RELBQ01201 579 aa11.78□□□□□ -0.52
CDH1-209ENST00000566510 PAX5Q02548 391 aa11.78□□□□□ -0.52
CDH1-209ENST00000566510 UTF1Q5T230 341 aa11.78□□□□□ -0.52
CDH1-209ENST00000566510 GBGT1Q8N5D6 347 aa11.78□□□□□ -0.52
CDH1-209ENST00000566510 DEFB123Q8N688 67 aa11.78□□□□□ -0.52
CDH1-209ENST00000566510 OCC1Q8TAD7 63 aa11.78□□□□□ -0.52
CDH1-209ENST00000566510 SEPSECSQ9HD40 501 aaKnown RBP11.78□□□□□ -0.52
CDH1-209ENST00000566510 JPT1Q9UK76 154 aa11.78□□□□□ -0.52
CDH1-209ENST00000566510 TCF19Q9Y242 345 aa11.78□□□□□ -0.52
CDH1-209ENST00000566510 CEP250Q9BV73 2442 aa11.77□□□□□ -0.52
CDH1-209ENST00000566510 GRIFINA4D1Z8 144 aa11.77□□□□□ -0.52
CDH1-209ENST00000566510 MKRN2OSH3BPM6 223 aa11.77□□□□□ -0.52
CDH1-209ENST00000566510 SLC31A2O15432 143 aa11.77□□□□□ -0.52
CDH1-209ENST00000566510 STAG3L2P0CL84 134 aa11.77□□□□□ -0.52
CDH1-209ENST00000566510 STAG3L3P0CL85 134 aa11.77□□□□□ -0.52
CDH1-209ENST00000566510 CD99P14209 185 aa11.77□□□□□ -0.52
CDH1-209ENST00000566510 NOL4LQ96MY1 436 aaPredicted RBP11.77□□□□□ -0.52
CDH1-209ENST00000566510 NPVFQ9HCQ7 196 aa11.77□□□□□ -0.52
CDH1-209ENST00000566510 YTHDF2Q9Y5A9 579 aaKnown RBP11.77□□□□□ -0.52
CDH1-209ENST00000566510 ACTL6BO94805 426 aa11.77□□□□□ -0.53
CDH1-209ENST00000566510 CCKARP32238 428 aa11.77□□□□□ -0.53
CDH1-209ENST00000566510 VDAC2P45880 294 aaPredicted RBP11.77□□□□□ -0.53
CDH1-209ENST00000566510 RPL15P61313 204 aaKnown RBP11.77□□□□□ -0.53
CDH1-209ENST00000566510 IQCJQ1A5X6 159 aa11.77□□□□□ -0.53
CDH1-209ENST00000566510 FAM201AQ5SY85 155 aa11.77□□□□□ -0.53
CDH1-209ENST00000566510 SPATA31B1PQ5VZV4 182 aa11.77□□□□□ -0.53
CDH1-209ENST00000566510 PPP1R35Q8TAP8 253 aa11.77□□□□□ -0.53
CDH1-209ENST00000566510 ELOVL5Q9NYP7 299 aa11.77□□□□□ -0.53
CDH1-209ENST00000566510 EP300Q09472 2414 aaPredicted RBP11.77□□□□□ -0.53
CDH1-209ENST00000566510 PLCE1Q9P212 2302 aa11.76□□□□□ -0.53
CDH1-209ENST00000566510 DSCAMO60469 2012 aa11.76□□□□□ -0.53
CDH1-209ENST00000566510 SLC17A3O00476 420 aa11.76□□□□□ -0.53
CDH1-209ENST00000566510 MGST3O14880 152 aa11.76□□□□□ -0.53
CDH1-209ENST00000566510 FOXH1O75593 365 aa11.76□□□□□ -0.53
CDH1-209ENST00000566510 SELLP14151 372 aa11.76□□□□□ -0.53
CDH1-209ENST00000566510 ZNF83P51522 516 aa11.76□□□□□ -0.53
CDH1-209ENST00000566510 ZNF90Q03938 601 aa11.76□□□□□ -0.53
CDH1-209ENST00000566510 FOXL1Q12952 345 aa11.76□□□□□ -0.53
CDH1-209ENST00000566510 SSX2Q16385 188 aa11.76□□□□□ -0.53
CDH1-209ENST00000566510 SPRNQ5BIV9 151 aa11.76□□□□□ -0.53
CDH1-209ENST00000566510 MOGAT3Q86VF5 341 aa11.76□□□□□ -0.53
CDH1-209ENST00000566510 OR10G8Q8NGN5 311 aa11.76□□□□□ -0.53
CDH1-209ENST00000566510 IFI27L2Q9H2X8 130 aa11.76□□□□□ -0.53
CDH1-209ENST00000566510 ENY2Q9NPA8 101 aa11.76□□□□□ -0.53
CDH1-209ENST00000566510 FKBP11Q9NYL4 201 aa11.76□□□□□ -0.53
CDH1-209ENST00000566510 CNOT1A5YKK6 2376 aaKnown RBP11.76□□□□□ -0.53
CDH1-209ENST00000566510 CACNA1GO43497 2377 aa11.76□□□□□ -0.53
CDH1-209ENST00000566510 SMG1Q96Q15 3661 aaKnown RBP11.76□□□□□ -0.53
CDH1-209ENST00000566510 SPRY3O43610 288 aa11.76□□□□□ -0.53
CDH1-209ENST00000566510 NUPR1O60356 82 aa11.76□□□□□ -0.53
CDH1-209ENST00000566510 YPEL1O60688 119 aa11.76□□□□□ -0.53
CDH1-209ENST00000566510 IL6RP08887 468 aaPredicted RBP11.76□□□□□ -0.53
CDH1-209ENST00000566510 ADMP35318 185 aa11.76□□□□□ -0.53
CDH1-209ENST00000566510 RPL31P62899 125 aaKnown RBP11.76□□□□□ -0.53
CDH1-209ENST00000566510 C1orf229Q6ZS94 237 aaPredicted RBP11.76□□□□□ -0.53
CDH1-209ENST00000566510 TMEM144Q7Z5S9 345 aa11.76□□□□□ -0.53
CDH1-209ENST00000566510 DMRTC2Q8IXT2 367 aaPredicted RBP11.76□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms