RNA–Protein interactions for RNA: ENST00000566290.5

RAB40C-210, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 3

Gene RAB40C, Length 753 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-210ENST00000566290 ZNF383Q8NA42 475 aa13.69□□□□□ -0.22
RAB40C-210ENST00000566290 LY6G5BQ8NDX9 201 aa13.69□□□□□ -0.22
RAB40C-210ENST00000566290 OR8B3Q8NGG8 313 aa13.69□□□□□ -0.22
RAB40C-210ENST00000566290 OR5C1Q8NGR4 320 aa13.69□□□□□ -0.22
RAB40C-210ENST00000566290 OSR1Q8TAX0 266 aaPredicted RBP13.69□□□□□ -0.22
RAB40C-210ENST00000566290 ST6GALNAC6Q969X2 333 aa13.69□□□□□ -0.22
RAB40C-210ENST00000566290 BSCL2Q96G97 398 aaPredicted RBP13.69□□□□□ -0.22
RAB40C-210ENST00000566290 OR8B2Q96RD0 313 aa13.69□□□□□ -0.22
RAB40C-210ENST00000566290 MMP26Q9NRE1 261 aa13.69□□□□□ -0.22
RAB40C-210ENST00000566290 PSENENQ9NZ42 101 aa13.69□□□□□ -0.22
RAB40C-210ENST00000566290 TEX46H3BTG2 121 aa13.68□□□□□ -0.22
RAB40C-210ENST00000566290 IGHV4-39P01824 125 aa13.68□□□□□ -0.22
RAB40C-210ENST00000566290 ARG1P05089 322 aa13.68□□□□□ -0.22
RAB40C-210ENST00000566290 IGHV1-8P0DP01 117 aa13.68□□□□□ -0.22
RAB40C-210ENST00000566290 NFYBP25208 207 aa13.68□□□□□ -0.22
RAB40C-210ENST00000566290 IL3RAP26951 378 aa13.68□□□□□ -0.22
RAB40C-210ENST00000566290 F2RL1P55085 397 aa13.68□□□□□ -0.22
RAB40C-210ENST00000566290 C11orf42Q8N5U0 333 aa13.68□□□□□ -0.22
RAB40C-210ENST00000566290 OR5AN1Q8NGI8 311 aa13.68□□□□□ -0.22
RAB40C-210ENST00000566290 H1FXQ92522 213 aaKnown RBP13.68□□□□□ -0.22
RAB40C-210ENST00000566290 MARC2Q969Z3 335 aa13.68□□□□□ -0.22
RAB40C-210ENST00000566290 PSMG3Q9BT73 122 aaPredicted RBP13.68□□□□□ -0.22
RAB40C-210ENST00000566290 RBKSQ9H477 322 aa13.68□□□□□ -0.22
RAB40C-210ENST00000566290 FOXA2Q9Y261 457 aaPredicted RBP13.68□□□□□ -0.22
RAB40C-210ENST00000566290 ZNF257Q9Y2Q1 563 aa13.68□□□□□ -0.22
RAB40C-210ENST00000566290 J3QR06 171 aa13.67□□□□□ -0.22
RAB40C-210ENST00000566290 SHOXO15266 292 aa13.67□□□□□ -0.22
RAB40C-210ENST00000566290 CCL3L1P16619 93 aa13.67□□□□□ -0.22
RAB40C-210ENST00000566290 ATP5IP56385 69 aaPredicted RBP13.67□□□□□ -0.22
RAB40C-210ENST00000566290 RELBQ01201 579 aa13.67□□□□□ -0.22
RAB40C-210ENST00000566290 IZUMO4Q1ZYL8 232 aa13.67□□□□□ -0.22
RAB40C-210ENST00000566290 OR2B11Q5JQS5 317 aa13.67□□□□□ -0.22
RAB40C-210ENST00000566290 PRSS57Q6UWY2 283 aa13.67□□□□□ -0.22
RAB40C-210ENST00000566290 C1orf229Q6ZS94 237 aaPredicted RBP13.67□□□□□ -0.22
RAB40C-210ENST00000566290 BEND2Q8NDZ0 799 aa13.67□□□□□ -0.22
RAB40C-210ENST00000566290 DTD1Q8TEA8 209 aa13.67□□□□□ -0.22
RAB40C-210ENST00000566290 PCNPQ8WW12 178 aaKnown RBP13.67□□□□□ -0.22
RAB40C-210ENST00000566290 SMIM3Q9BZL3 60 aa13.67□□□□□ -0.22
RAB40C-210ENST00000566290 hCG_1809904A0A1W2PP81 198 aa13.66□□□□□ -0.22
RAB40C-210ENST00000566290 A0A1W2PPE2 198 aa13.66□□□□□ -0.22
RAB40C-210ENST00000566290 A0A1W2PR64 198 aa13.66□□□□□ -0.22
RAB40C-210ENST00000566290 A0A1W2PRV1 198 aa13.66□□□□□ -0.22
RAB40C-210ENST00000566290 C15orf61A6NNL5 157 aa13.66□□□□□ -0.22
RAB40C-210ENST00000566290 I3L521 148 aa13.66□□□□□ -0.22
RAB40C-210ENST00000566290 SOX15O60248 233 aa13.66□□□□□ -0.22
RAB40C-210ENST00000566290 APOA2P02652 100 aa13.66□□□□□ -0.22
RAB40C-210ENST00000566290 CT45A6P0DMU7 189 aa13.66□□□□□ -0.22
RAB40C-210ENST00000566290 CT45A5P0DMU8 189 aa13.66□□□□□ -0.22
RAB40C-210ENST00000566290 CT45A7P0DMV0 189 aa13.66□□□□□ -0.22
RAB40C-210ENST00000566290 DYNLT3P51808 116 aa13.66□□□□□ -0.22
RAB40C-210ENST00000566290 RPP30P78346 268 aaKnown RBP13.66□□□□□ -0.22
RAB40C-210ENST00000566290 TMEM177Q53S58 311 aa13.66□□□□□ -0.22
RAB40C-210ENST00000566290 WDR25Q64LD2 544 aaPredicted RBP13.66□□□□□ -0.22
RAB40C-210ENST00000566290 BTNL8Q6UX41 500 aa13.66□□□□□ -0.22
RAB40C-210ENST00000566290 PDPNQ86YL7 162 aa13.66□□□□□ -0.22
RAB40C-210ENST00000566290 PINX1Q96BK5 328 aaKnown RBP13.66□□□□□ -0.22
RAB40C-210ENST00000566290 TMEM133Q9H2Q1 129 aa13.66□□□□□ -0.22
RAB40C-210ENST00000566290 PATZ1Q9HBE1 687 aaKnown RBP13.66□□□□□ -0.22
RAB40C-210ENST00000566290 TMEM14BQ9NUH8 114 aa13.66□□□□□ -0.22
RAB40C-210ENST00000566290 TMEM140Q9NV12 185 aa13.66□□□□□ -0.22
RAB40C-210ENST00000566290 BET1LQ9NYM9 111 aa13.66□□□□□ -0.22
RAB40C-210ENST00000566290 MEX3AA1L020 520 aaKnown RBP13.65□□□□□ -0.22
RAB40C-210ENST00000566290 ZNF705EA8MWA4 302 aaPredicted RBP13.65□□□□□ -0.22
RAB40C-210ENST00000566290 IFNA5P01569 189 aa13.65□□□□□ -0.22
RAB40C-210ENST00000566290 IGLV1-47P01700 117 aa13.65□□□□□ -0.22
RAB40C-210ENST00000566290 OR9G9P0C7N8 305 aa13.65□□□□□ -0.22
RAB40C-210ENST00000566290 GNB2P62879 340 aa13.65□□□□□ -0.22
RAB40C-210ENST00000566290 PJVKQ0ZLH3 352 aa13.65□□□□□ -0.22
RAB40C-210ENST00000566290 VWC2Q2TAL6 325 aa13.65□□□□□ -0.22
RAB40C-210ENST00000566290 UTF1Q5T230 341 aa13.65□□□□□ -0.22
RAB40C-210ENST00000566290 PXDC1Q5TGL8 231 aa13.65□□□□□ -0.22
RAB40C-210ENST00000566290 CENPVQ7Z7K6 275 aaPredicted RBP13.65□□□□□ -0.22
RAB40C-210ENST00000566290 KIR3DL3Q8N743 410 aa13.65□□□□□ -0.22
RAB40C-210ENST00000566290 ZNF525Q8N782 197 aa13.65□□□□□ -0.22
RAB40C-210ENST00000566290 OR4A5Q8NH83 315 aa13.65□□□□□ -0.22
RAB40C-210ENST00000566290 TMEM158Q8WZ71 300 aa13.65□□□□□ -0.22
RAB40C-210ENST00000566290 LEAP2Q969E1 77 aa13.65□□□□□ -0.22
RAB40C-210ENST00000566290 RHOVQ96L33 236 aa13.65□□□□□ -0.22
RAB40C-210ENST00000566290 GGACTQ9BVM4 153 aa13.65□□□□□ -0.22
RAB40C-210ENST00000566290 SLC35D1Q9NTN3 355 aa13.65□□□□□ -0.22
RAB40C-210ENST00000566290 PRNDQ9UKY0 176 aa13.65□□□□□ -0.22
RAB40C-210ENST00000566290 TIMM9Q9Y5J7 89 aa13.65□□□□□ -0.22
RAB40C-210ENST00000566290 ANK2Q01484 3957 aa13.64□□□□□ -0.23
RAB40C-210ENST00000566290 PMS2P5A8MQ11 134 aa13.64□□□□□ -0.23
RAB40C-210ENST00000566290 INS-IGF2F8WCM5 200 aa13.64□□□□□ -0.23
RAB40C-210ENST00000566290 M0R1W7 72 aa13.64□□□□□ -0.23
RAB40C-210ENST00000566290 CST7O76096 145 aa13.64□□□□□ -0.23
RAB40C-210ENST00000566290 F12P00748 615 aaPredicted RBP13.64□□□□□ -0.23
RAB40C-210ENST00000566290 ATP6V0CP27449 155 aa13.64□□□□□ -0.23
RAB40C-210ENST00000566290 MC5RP33032 325 aa13.64□□□□□ -0.23
RAB40C-210ENST00000566290 GNG10P50151 68 aa13.64□□□□□ -0.23
RAB40C-210ENST00000566290 RAB13P51153 203 aa13.64□□□□□ -0.23
RAB40C-210ENST00000566290 C1orf122Q6ZSJ8 110 aa13.64□□□□□ -0.23
RAB40C-210ENST00000566290 LFNGQ8NES3 379 aa13.64□□□□□ -0.23
RAB40C-210ENST00000566290 OR4A16Q8NH70 328 aa13.64□□□□□ -0.23
RAB40C-210ENST00000566290 FKBP11Q9NYL4 201 aa13.64□□□□□ -0.23
RAB40C-210ENST00000566290 BTBD17A6NE02 478 aa13.63□□□□□ -0.23
RAB40C-210ENST00000566290 H0YJW9 148 aa13.63□□□□□ -0.23
RAB40C-210ENST00000566290 LY6HO94772 140 aa13.63□□□□□ -0.23
RAB40C-210ENST00000566290 CRYZL1O95825 349 aa13.63□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 103.2 ms