RNA–Protein interactions for RNA: ENST00000565393.2

TCF4-228, Transcript of transcription factor 4, humanhuman

TSL 1 (best)

Gene TCF4, Length 314 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-228ENST00000565393 IFNA6P05013 189 aa4.88□□□□□ -1.63
TCF4-228ENST00000565393 REG1AP05451 166 aa4.88□□□□□ -1.63
TCF4-228ENST00000565393 IL6RP08887 468 aaPredicted RBP4.88□□□□□ -1.63
TCF4-228ENST00000565393 MAS1LP35410 378 aa4.88□□□□□ -1.63
TCF4-228ENST00000565393 FXYD4P59646 89 aa4.88□□□□□ -1.63
TCF4-228ENST00000565393 RPL8P62917 257 aaKnown RBP4.88□□□□□ -1.63
TCF4-228ENST00000565393 NEDD8Q15843 81 aa4.88□□□□□ -1.63
TCF4-228ENST00000565393 GUCA2BQ16661 112 aa4.88□□□□□ -1.63
TCF4-228ENST00000565393 C15orf32Q32M92 178 aa4.88□□□□□ -1.63
TCF4-228ENST00000565393 FAM106AQ4KMX7 169 aa4.88□□□□□ -1.63
TCF4-228ENST00000565393 CASC10Q5T4H9 136 aa4.88□□□□□ -1.63
TCF4-228ENST00000565393 ZFAND6Q6FIF0 208 aa4.88□□□□□ -1.63
TCF4-228ENST00000565393 ZNF773Q6PK81 442 aa4.88□□□□□ -1.63
TCF4-228ENST00000565393 CLEC19AQ6UXS0 136 aa4.88□□□□□ -1.63
TCF4-228ENST00000565393 SPAG16Q8N0X2 631 aa4.88□□□□□ -1.63
TCF4-228ENST00000565393 ZBTB34Q8NCN2 500 aa4.88□□□□□ -1.63
TCF4-228ENST00000565393 TMEM167AQ8TBQ9 72 aa4.88□□□□□ -1.63
TCF4-228ENST00000565393 AUNIPQ9H7T9 357 aa4.88□□□□□ -1.63
TCF4-228ENST00000565393 SLC2A9Q9NRM0 540 aa4.88□□□□□ -1.63
TCF4-228ENST00000565393 SLC2A8Q9NY64 477 aa4.88□□□□□ -1.63
TCF4-228ENST00000565393 SIGLEC8Q9NYZ4 499 aa4.88□□□□□ -1.63
TCF4-228ENST00000565393 ETV7Q9Y603 341 aa4.88□□□□□ -1.63
TCF4-228ENST00000565393 S4R3C0 116 aa4.88□□□□□ -1.63
TCF4-228ENST00000565393 TGP01266 2768 aa4.88□□□□□ -1.63
TCF4-228ENST00000565393 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP4.87□□□□□ -1.63
TCF4-228ENST00000565393 A0A0A6YYH2 397 aa4.87□□□□□ -1.63
TCF4-228ENST00000565393 MEIS3P1A6NDR6 274 aa4.87□□□□□ -1.63
TCF4-228ENST00000565393 A6NJ64 397 aa4.87□□□□□ -1.63
TCF4-228ENST00000565393 ZNF785A8K8V0 405 aa4.87□□□□□ -1.63
TCF4-228ENST00000565393 A8MZ25 164 aa4.87□□□□□ -1.63
TCF4-228ENST00000565393 TEX22C9J3V5 150 aa4.87□□□□□ -1.63
TCF4-228ENST00000565393 E7EUB6 86 aa4.87□□□□□ -1.63
TCF4-228ENST00000565393 TPPPO94811 219 aa4.87□□□□□ -1.63
TCF4-228ENST00000565393 KBTBD11O94819 623 aa4.87□□□□□ -1.63
TCF4-228ENST00000565393 HPRT1P00492 218 aa4.87□□□□□ -1.63
TCF4-228ENST00000565393 PPYP01298 95 aa4.87□□□□□ -1.63
TCF4-228ENST00000565393 CLEC3BP05452 202 aa4.87□□□□□ -1.63
TCF4-228ENST00000565393 FOLR2P14207 255 aa4.87□□□□□ -1.63
TCF4-228ENST00000565393 MYOD1P15172 320 aa4.87□□□□□ -1.63
TCF4-228ENST00000565393 RPA2P15927 270 aa4.87□□□□□ -1.63
TCF4-228ENST00000565393 HIST1H1BP16401 226 aaKnown RBP4.87□□□□□ -1.63
TCF4-228ENST00000565393 HLA-GP17693 338 aa4.87□□□□□ -1.63
TCF4-228ENST00000565393 PSMB6P28072 239 aa4.87□□□□□ -1.63
TCF4-228ENST00000565393 ARL3P36405 182 aa4.87□□□□□ -1.63
TCF4-228ENST00000565393 KIR2DS2P43631 304 aa4.87□□□□□ -1.63
TCF4-228ENST00000565393 CBX5P45973 191 aa4.87□□□□□ -1.63
TCF4-228ENST00000565393 MECP2P51608 486 aaKnown RBP4.87□□□□□ -1.63
TCF4-228ENST00000565393 SCAND1P57086 179 aa4.87□□□□□ -1.63
TCF4-228ENST00000565393 BRWD1-AS2P59051 145 aa4.87□□□□□ -1.63
TCF4-228ENST00000565393 CD81P60033 236 aa4.87□□□□□ -1.63
TCF4-228ENST00000565393 LSM3P62310 102 aaKnown RBP4.87□□□□□ -1.63
TCF4-228ENST00000565393 HAGHQ16775 308 aa4.87□□□□□ -1.63
TCF4-228ENST00000565393 DEFB114Q30KQ6 69 aa4.87□□□□□ -1.63
TCF4-228ENST00000565393 CD300EQ496F6 205 aaPredicted RBP4.87□□□□□ -1.63
TCF4-228ENST00000565393 FAM209BQ5JX69 171 aa4.87□□□□□ -1.63
TCF4-228ENST00000565393 OR4A47Q6IF82 309 aa4.87□□□□□ -1.63
TCF4-228ENST00000565393 C19orf35Q6ZS72 473 aa4.87□□□□□ -1.63
TCF4-228ENST00000565393 PUSL1Q8N0Z8 303 aaKnown RBP4.87□□□□□ -1.63
TCF4-228ENST00000565393 TSPAN14Q8NG11 270 aa4.87□□□□□ -1.63
TCF4-228ENST00000565393 OR5AP2Q8NGF4 316 aa4.87□□□□□ -1.63
TCF4-228ENST00000565393 OR13F1Q8NGS4 319 aa4.87□□□□□ -1.63
TCF4-228ENST00000565393 OR2K2Q8NGT1 345 aa4.87□□□□□ -1.63
TCF4-228ENST00000565393 GIMAP1Q8WWP7 306 aa4.87□□□□□ -1.63
TCF4-228ENST00000565393 EEF1AKMT3Q96AZ1 226 aa4.87□□□□□ -1.63
TCF4-228ENST00000565393 CITED4Q96RK1 184 aa4.87□□□□□ -1.63
TCF4-228ENST00000565393 NEURL2Q9BR09 285 aa4.87□□□□□ -1.63
TCF4-228ENST00000565393 SPATA25Q9BR10 227 aa4.87□□□□□ -1.63
TCF4-228ENST00000565393 TM2D3Q9BRN9 247 aa4.87□□□□□ -1.63
TCF4-228ENST00000565393 COMMD5Q9GZQ3 224 aa4.87□□□□□ -1.63
TCF4-228ENST00000565393 PLEKHA3Q9HB20 300 aa4.87□□□□□ -1.63
TCF4-228ENST00000565393 IFT46Q9NQC8 304 aa4.87□□□□□ -1.63
TCF4-228ENST00000565393 ZC4H2Q9NQZ6 224 aa4.87□□□□□ -1.63
TCF4-228ENST00000565393 ZNF257Q9Y2Q1 563 aa4.87□□□□□ -1.63
TCF4-228ENST00000565393 SELENOKQ9Y6D0 94 aa4.87□□□□□ -1.63
TCF4-228ENST00000565393 TRBV7-1A0A0A6YYK4 115 aa4.86□□□□□ -1.63
TCF4-228ENST00000565393 SMIM31A0A1B0GVY4 71 aa4.86□□□□□ -1.63
TCF4-228ENST00000565393 C2orf70A6NJV1 201 aa4.86□□□□□ -1.63
TCF4-228ENST00000565393 NPIPB5A8MRT5 1133 aa4.86□□□□□ -1.63
TCF4-228ENST00000565393 OR11H12B2RN74 326 aa4.86□□□□□ -1.63
TCF4-228ENST00000565393 UPK2O00526 184 aa4.86□□□□□ -1.63
TCF4-228ENST00000565393 CYB5BO43169 146 aa4.86□□□□□ -1.63
TCF4-228ENST00000565393 XRCC3O43542 346 aa4.86□□□□□ -1.63
TCF4-228ENST00000565393 PMP2P02689 132 aa4.86□□□□□ -1.63
TCF4-228ENST00000565393 CD7P09564 240 aa4.86□□□□□ -1.63
TCF4-228ENST00000565393 ZNF735P0CB33 412 aa4.86□□□□□ -1.63
TCF4-228ENST00000565393 AREGP15514 252 aa4.86□□□□□ -1.63
TCF4-228ENST00000565393 NQO2P16083 231 aa4.86□□□□□ -1.63
TCF4-228ENST00000565393 CBLN1P23435 193 aa4.86□□□□□ -1.63
TCF4-228ENST00000565393 RPS19P39019 145 aaKnown RBP4.86□□□□□ -1.63
TCF4-228ENST00000565393 RFX2P48378 723 aa4.86□□□□□ -1.63
TCF4-228ENST00000565393 HERV-K104P61576 105 aa4.86□□□□□ -1.63
TCF4-228ENST00000565393 CATR1Q13166 79 aa4.86□□□□□ -1.63
TCF4-228ENST00000565393 EIF4EBP1Q13541 118 aaPredicted RBP4.86□□□□□ -1.63
TCF4-228ENST00000565393 TIMM50Q3ZCQ8 353 aa4.86□□□□□ -1.63
TCF4-228ENST00000565393 AADACL3Q5VUY0 350 aa4.86□□□□□ -1.63
TCF4-228ENST00000565393 SLC25A24Q6NUK1 477 aa4.86□□□□□ -1.63
TCF4-228ENST00000565393 ADAMTSL5Q6ZMM2 481 aa4.86□□□□□ -1.63
TCF4-228ENST00000565393 TMEM17Q86X19 198 aa4.86□□□□□ -1.63
TCF4-228ENST00000565393 GPHB5Q86YW7 130 aa4.86□□□□□ -1.63
TCF4-228ENST00000565393 CROCCP3Q8IVE0 287 aa4.86□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms