RNA–Protein interactions for RNA: ENST00000564734.5

HERC2-207, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 2, humanhuman

TSL 1 (best)

Gene HERC2, Length 3,121 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC2-207ENST00000564734 ATRXP46100 2492 aa12.59□□□□□ -0.39
HERC2-207ENST00000564734 C3orf36Q3SXR2 165 aa12.59□□□□□ -0.39
HERC2-207ENST00000564734 TIMM23BQ5SRD1 257 aa12.59□□□□□ -0.39
HERC2-207ENST00000564734 VKORC1L1Q8N0U8 176 aa12.59□□□□□ -0.39
HERC2-207ENST00000564734 OR4A16Q8NH70 328 aa12.59□□□□□ -0.39
HERC2-207ENST00000564734 CALYQ9NYX4 217 aa12.59□□□□□ -0.39
HERC2-207ENST00000564734 DMRT1Q9Y5R6 373 aa12.59□□□□□ -0.39
HERC2-207ENST00000564734 SOX15O60248 233 aa12.59□□□□□ -0.39
HERC2-207ENST00000564734 RPP30P78346 268 aaKnown RBP12.59□□□□□ -0.39
HERC2-207ENST00000564734 CDPF1Q6NVV7 123 aa12.59□□□□□ -0.39
HERC2-207ENST00000564734 TREML4Q6UXN2 200 aa12.59□□□□□ -0.39
HERC2-207ENST00000564734 TGIF2LYQ8IUE0 185 aa12.59□□□□□ -0.39
HERC2-207ENST00000564734 OR10D4PQ8NGN7 298 aa12.59□□□□□ -0.39
HERC2-207ENST00000564734 FAM222BQ8WU58 562 aa12.59□□□□□ -0.39
HERC2-207ENST00000564734 IGLV3-9A0A075B6K5 115 aa12.58□□□□□ -0.4
HERC2-207ENST00000564734 M0R1B8 84 aa12.58□□□□□ -0.4
HERC2-207ENST00000564734 GYPAP02724 150 aa12.58□□□□□ -0.4
HERC2-207ENST00000564734 GLRXP35754 106 aa12.58□□□□□ -0.4
HERC2-207ENST00000564734 KIR2DS2P43631 304 aa12.58□□□□□ -0.4
HERC2-207ENST00000564734 C4orf17Q53FE4 359 aa12.58□□□□□ -0.4
HERC2-207ENST00000564734 C1orf159Q96HA4 380 aa12.58□□□□□ -0.4
HERC2-207ENST00000564734 FAM215AQ9Y5M1 114 aa12.58□□□□□ -0.4
HERC2-207ENST00000564734 MPDU1O75352 247 aa12.58□□□□□ -0.4
HERC2-207ENST00000564734 VENTXO95231 258 aa12.58□□□□□ -0.4
HERC2-207ENST00000564734 IGHV3-7P01780 117 aa12.58□□□□□ -0.4
HERC2-207ENST00000564734 RD3LP0DJH9 198 aa12.58□□□□□ -0.4
HERC2-207ENST00000564734 OPRK1P41145 380 aa12.58□□□□□ -0.4
HERC2-207ENST00000564734 S1PR3Q99500 378 aa12.58□□□□□ -0.4
HERC2-207ENST00000564734 SPENQ96T58 3664 aaKnown RBP12.58□□□□□ -0.4
HERC2-207ENST00000564734 ZZEF1O43149 2961 aa12.58□□□□□ -0.4
HERC2-207ENST00000564734 TRAV38-1A0A0B4J264 116 aa12.57□□□□□ -0.4
HERC2-207ENST00000564734 C11orf94C9JXX5 98 aa12.57□□□□□ -0.4
HERC2-207ENST00000564734 GALR1P47211 349 aa12.57□□□□□ -0.4
HERC2-207ENST00000564734 RTP5Q14D33 572 aa12.57□□□□□ -0.4
HERC2-207ENST00000564734 ANAPC16Q96DE5 110 aa12.57□□□□□ -0.4
HERC2-207ENST00000564734 MGST2Q99735 147 aa12.57□□□□□ -0.4
HERC2-207ENST00000564734 FAM234AQ9H0X4 552 aa12.57□□□□□ -0.4
HERC2-207ENST00000564734 TMEM140Q9NV12 185 aa12.57□□□□□ -0.4
HERC2-207ENST00000564734 DIDO1Q9BTC0 2240 aaKnown RBP12.57□□□□□ -0.4
HERC2-207ENST00000564734 H7BYZ3 331 aa12.57□□□□□ -0.4
HERC2-207ENST00000564734 IFNA10P01566 189 aa12.57□□□□□ -0.4
HERC2-207ENST00000564734 GATA4P43694 442 aa12.57□□□□□ -0.4
HERC2-207ENST00000564734 KLF3P57682 345 aaPredicted RBP12.57□□□□□ -0.4
HERC2-207ENST00000564734 CT45A1Q5HYN5 189 aa12.57□□□□□ -0.4
HERC2-207ENST00000564734 RPRMLQ8N4K4 120 aa12.57□□□□□ -0.4
HERC2-207ENST00000564734 ZADH2Q8N4Q0 377 aa12.57□□□□□ -0.4
HERC2-207ENST00000564734 CT45A3Q8NHU0 189 aa12.57□□□□□ -0.4
HERC2-207ENST00000564734 ITLN1Q8WWA0 313 aa12.57□□□□□ -0.4
HERC2-207ENST00000564734 ELOVL1Q9BW60 279 aa12.57□□□□□ -0.4
HERC2-207ENST00000564734 MS4A5Q9H3V2 200 aa12.57□□□□□ -0.4
HERC2-207ENST00000564734 TRGV8A0A0C4DH27 118 aa12.57□□□□□ -0.4
HERC2-207ENST00000564734 EDDM3BP56851 147 aa12.57□□□□□ -0.4
HERC2-207ENST00000564734 ERVK-16P61578 105 aa12.57□□□□□ -0.4
HERC2-207ENST00000564734 GNB1P62873 340 aa12.57□□□□□ -0.4
HERC2-207ENST00000564734 IGFL3Q6UXB1 125 aa12.57□□□□□ -0.4
HERC2-207ENST00000564734 NECAP1Q8NC96 275 aa12.57□□□□□ -0.4
HERC2-207ENST00000564734 GFOD1Q9NXC2 390 aa12.57□□□□□ -0.4
HERC2-207ENST00000564734 TRAV20A0A0B4J274 112 aa12.56□□□□□ -0.4
HERC2-207ENST00000564734 HRASP01112 189 aa12.56□□□□□ -0.4
HERC2-207ENST00000564734 SELLP14151 372 aa12.56□□□□□ -0.4
HERC2-207ENST00000564734 PDZD11Q5EBL8 140 aa12.56□□□□□ -0.4
HERC2-207ENST00000564734 ABHD12Q8N2K0 398 aa12.56□□□□□ -0.4
HERC2-207ENST00000564734 HEYLQ9NQ87 328 aaPredicted RBP12.56□□□□□ -0.4
HERC2-207ENST00000564734 PITPNC1Q9UKF7 332 aa12.56□□□□□ -0.4
HERC2-207ENST00000564734 TCF19Q9Y242 345 aa12.56□□□□□ -0.4
HERC2-207ENST00000564734 CACNA1DQ01668 2161 aa12.56□□□□□ -0.4
HERC2-207ENST00000564734 CACNA1BQ00975 2339 aa12.56□□□□□ -0.4
HERC2-207ENST00000564734 SPRY3O43610 288 aa12.56□□□□□ -0.4
HERC2-207ENST00000564734 FAM201AQ5SY85 155 aa12.56□□□□□ -0.4
HERC2-207ENST00000564734 GGTLC1Q9BX51 225 aa12.56□□□□□ -0.4
HERC2-207ENST00000564734 LSM4Q9Y4Z0 139 aaKnown RBP12.56□□□□□ -0.4
HERC2-207ENST00000564734 TLN1Q9Y490 2541 aaKnown RBP12.56□□□□□ -0.4
HERC2-207ENST00000564734 TMPRSS2O15393 492 aa12.55□□□□□ -0.4
HERC2-207ENST00000564734 PDE6DO43924 150 aa12.55□□□□□ -0.4
HERC2-207ENST00000564734 GGCTO75223 188 aaKnown RBP12.55□□□□□ -0.4
HERC2-207ENST00000564734 CRYAAP02489 173 aa12.55□□□□□ -0.4
HERC2-207ENST00000564734 ATP5G3P48201 142 aa12.55□□□□□ -0.4
HERC2-207ENST00000564734 RAB7AP51149 207 aa12.55□□□□□ -0.4
HERC2-207ENST00000564734 DNLZQ5SXM8 178 aa12.55□□□□□ -0.4
HERC2-207ENST00000564734 ZNF436-AS1Q8NC38 126 aaPredicted RBP12.55□□□□□ -0.4
HERC2-207ENST00000564734 LEAP2Q969E1 77 aa12.55□□□□□ -0.4
HERC2-207ENST00000564734 SDSLQ96GA7 329 aa12.55□□□□□ -0.4
HERC2-207ENST00000564734 KBTBD11-OT1A0A1B0GTJ5 212 aa12.55□□□□□ -0.4
HERC2-207ENST00000564734 DUX4L9Q6RFH8 374 aaPredicted RBP12.55□□□□□ -0.4
HERC2-207ENST00000564734 TCF23Q7RTU1 214 aa12.55□□□□□ -0.4
HERC2-207ENST00000564734 ZNF383Q8NA42 475 aa12.55□□□□□ -0.4
HERC2-207ENST00000564734 ZNF439Q8NDP4 499 aa12.55□□□□□ -0.4
HERC2-207ENST00000564734 OR5B12Q96R08 314 aa12.55□□□□□ -0.4
HERC2-207ENST00000564734 KCNIP2Q9NS61 270 aa12.55□□□□□ -0.4
HERC2-207ENST00000564734 DOCK11Q5JSL3 2073 aa12.55□□□□□ -0.4
HERC2-207ENST00000564734 C15orf61A6NNL5 157 aa12.55□□□□□ -0.4
HERC2-207ENST00000564734 OR4S2Q8NH73 311 aa12.55□□□□□ -0.4
HERC2-207ENST00000564734 PCGF1Q9BSM1 259 aa12.55□□□□□ -0.4
HERC2-207ENST00000564734 PATZ1Q9HBE1 687 aaKnown RBP12.55□□□□□ -0.4
HERC2-207ENST00000564734 SRP14P37108 136 aaKnown RBP12.54□□□□□ -0.4
HERC2-207ENST00000564734 COA6Q5JTJ3 125 aaKnown RBP12.54□□□□□ -0.4
HERC2-207ENST00000564734 ALKBH2Q6NS38 261 aa12.54□□□□□ -0.4
HERC2-207ENST00000564734 LINC01551Q86U37 167 aa12.54□□□□□ -0.4
HERC2-207ENST00000564734 HIST1H2BLQ99880 126 aa12.54□□□□□ -0.4
HERC2-207ENST00000564734 FOXA2Q9Y261 457 aaPredicted RBP12.54□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 75.3 ms