RNA–Protein interactions for RNA: ENST00000564676.5

CDH1-206, Transcript of cadherin 1, humanhuman

TSL 1 (best)

Gene CDH1, Length 969 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-206ENST00000564676 P2RX4Q99571 388 aa7.74□□□□□ -1.17
CDH1-206ENST00000564676 AIFM2Q9BRQ8 373 aa7.74□□□□□ -1.17
CDH1-206ENST00000564676 SLIRPQ9GZT3 109 aaKnown RBP7.74□□□□□ -1.17
CDH1-206ENST00000564676 FXYD6Q9H0Q3 95 aa7.74□□□□□ -1.17
CDH1-206ENST00000564676 ZNF430Q9H8G1 570 aaPredicted RBP7.74□□□□□ -1.17
CDH1-206ENST00000564676 GNB4Q9HAV0 340 aa7.74□□□□□ -1.17
CDH1-206ENST00000564676 MTFP1Q9UDX5 166 aa7.74□□□□□ -1.17
CDH1-206ENST00000564676 GABARAPH6UMI1 98 aa7.73□□□□□ -1.17
CDH1-206ENST00000564676 RBFOX2O43251 390 aaKnown RBP eCLIP7.73□□□□□ -1.17
CDH1-206ENST00000564676 KBTBD11O94819 623 aa7.73□□□□□ -1.17
CDH1-206ENST00000564676 DUS4LO95620 317 aaKnown RBP7.73□□□□□ -1.17
CDH1-206ENST00000564676 HPRT1P00492 218 aa7.73□□□□□ -1.17
CDH1-206ENST00000564676 TRGV3P03979 118 aa7.73□□□□□ -1.17
CDH1-206ENST00000564676 RLN1P04808 185 aa7.73□□□□□ -1.17
CDH1-206ENST00000564676 APELAP0DMC3 54 aa7.73□□□□□ -1.17
CDH1-206ENST00000564676 TAS2R19P59542 299 aa7.73□□□□□ -1.17
CDH1-206ENST00000564676 MRPS10P82664 201 aaKnown RBP7.73□□□□□ -1.17
CDH1-206ENST00000564676 DGCR2P98153 550 aa7.73□□□□□ -1.17
CDH1-206ENST00000564676 MRGPRG-AS1Q2M3A8 158 aa7.73□□□□□ -1.17
CDH1-206ENST00000564676 BEAN1Q3B7T3 259 aa7.73□□□□□ -1.17
CDH1-206ENST00000564676 PHLDA2Q53GA4 152 aa7.73□□□□□ -1.17
CDH1-206ENST00000564676 OR11H1Q8NG94 326 aa7.73□□□□□ -1.17
CDH1-206ENST00000564676 OR1N2Q8NGR9 330 aa7.73□□□□□ -1.17
CDH1-206ENST00000564676 DPF1Q92782 380 aa7.73□□□□□ -1.17
CDH1-206ENST00000564676 RCC1LQ96I51 464 aaKnown RBP7.73□□□□□ -1.17
CDH1-206ENST00000564676 TINAGL1Q9GZM7 467 aaPredicted RBP7.73□□□□□ -1.17
CDH1-206ENST00000564676 SLA2Q9H6Q3 261 aa7.73□□□□□ -1.17
CDH1-206ENST00000564676 HRASLSQ9HDD0 168 aa7.73□□□□□ -1.17
CDH1-206ENST00000564676 RABL2AQ9UBK7 228 aaPredicted RBP7.73□□□□□ -1.17
CDH1-206ENST00000564676 RSL24D1Q9UHA3 163 aaKnown RBP7.73□□□□□ -1.17
CDH1-206ENST00000564676 RABL2BQ9UNT1 228 aa7.73□□□□□ -1.17
CDH1-206ENST00000564676 H3BUA1 57 aa7.72□□□□□ -1.17
CDH1-206ENST00000564676 IGHV3-11P01762 117 aa7.72□□□□□ -1.17
CDH1-206ENST00000564676 CD3DP04234 171 aa7.72□□□□□ -1.17
CDH1-206ENST00000564676 PGAM2P15259 253 aa7.72□□□□□ -1.17
CDH1-206ENST00000564676 NQO2P16083 231 aa7.72□□□□□ -1.17
CDH1-206ENST00000564676 TBPP20226 339 aa7.72□□□□□ -1.17
CDH1-206ENST00000564676 F2RP25116 425 aa7.72□□□□□ -1.17
CDH1-206ENST00000564676 UCP3P55916 312 aa7.72□□□□□ -1.17
CDH1-206ENST00000564676 TAS2R31P59538 309 aa7.72□□□□□ -1.17
CDH1-206ENST00000564676 ERVK-16P61578 105 aa7.72□□□□□ -1.17
CDH1-206ENST00000564676 SSBP1Q04837 148 aaKnown RBP7.72□□□□□ -1.17
CDH1-206ENST00000564676 C10orf55Q5SWW7 151 aa7.72□□□□□ -1.17
CDH1-206ENST00000564676 SLC38A6Q8IZM9 456 aa7.72□□□□□ -1.17
CDH1-206ENST00000564676 PUSL1Q8N0Z8 303 aaKnown RBP7.72□□□□□ -1.17
CDH1-206ENST00000564676 TMEM229BQ8NBD8 167 aa7.72□□□□□ -1.17
CDH1-206ENST00000564676 DMBX1Q8NFW5 382 aa7.72□□□□□ -1.17
CDH1-206ENST00000564676 OR4A5Q8NH83 315 aa7.72□□□□□ -1.17
CDH1-206ENST00000564676 TMEM167AQ8TBQ9 72 aa7.72□□□□□ -1.17
CDH1-206ENST00000564676 DGCR14Q96DF8 476 aaKnown RBP7.72□□□□□ -1.17
CDH1-206ENST00000564676 FYTTD1Q96QD9 318 aaKnown RBP7.72□□□□□ -1.17
CDH1-206ENST00000564676 SPIN2AQ99865 258 aa7.72□□□□□ -1.17
CDH1-206ENST00000564676 SPIN2BQ9BPZ2 258 aa7.72□□□□□ -1.17
CDH1-206ENST00000564676 MCRIP2Q9BUT9 160 aaKnown RBP7.72□□□□□ -1.17
CDH1-206ENST00000564676 GPR61Q9BZJ8 451 aa7.72□□□□□ -1.17
CDH1-206ENST00000564676 PLEKHA2Q9HB19 425 aa7.72□□□□□ -1.17
CDH1-206ENST00000564676 COA4Q9NYJ1 87 aa7.72□□□□□ -1.17
CDH1-206ENST00000564676 C13orf42A0A1B0GVH6 325 aa7.71□□□□□ -1.18
CDH1-206ENST00000564676 DPPA5A6NC42 116 aa7.71□□□□□ -1.18
CDH1-206ENST00000564676 FABP12A6NFH5 140 aa7.71□□□□□ -1.18
CDH1-206ENST00000564676 I3L521 148 aa7.71□□□□□ -1.18
CDH1-206ENST00000564676 CTDSPLO15194 276 aa7.71□□□□□ -1.18
CDH1-206ENST00000564676 S1PR2O95136 353 aa7.71□□□□□ -1.18
CDH1-206ENST00000564676 RAB3DO95716 219 aa7.71□□□□□ -1.18
CDH1-206ENST00000564676 OR8U8P0C7N1 319 aa7.71□□□□□ -1.18
CDH1-206ENST00000564676 OR9G9P0C7N8 305 aa7.71□□□□□ -1.18
CDH1-206ENST00000564676 RPA2P15927 270 aa7.71□□□□□ -1.18
CDH1-206ENST00000564676 TNFSF8P32971 234 aa7.71□□□□□ -1.18
CDH1-206ENST00000564676 MAS1LP35410 378 aa7.71□□□□□ -1.18
CDH1-206ENST00000564676 LPAR6P43657 344 aa7.71□□□□□ -1.18
CDH1-206ENST00000564676 RPL27AP46776 148 aaKnown RBP7.71□□□□□ -1.18
CDH1-206ENST00000564676 RPL8P62917 257 aaKnown RBP7.71□□□□□ -1.18
CDH1-206ENST00000564676 RUNX1Q01196 453 aa7.71□□□□□ -1.18
CDH1-206ENST00000564676 ZNF616Q08AN1 781 aa7.71□□□□□ -1.18
CDH1-206ENST00000564676 SCGB2B2Q4G0G5 96 aa7.71□□□□□ -1.18
CDH1-206ENST00000564676 KPRPQ5T749 579 aaPredicted RBP7.71□□□□□ -1.18
CDH1-206ENST00000564676 ASPHD1Q5U4P2 390 aa7.71□□□□□ -1.18
CDH1-206ENST00000564676 FOXB2Q5VYV0 432 aa7.71□□□□□ -1.18
CDH1-206ENST00000564676 OR4A47Q6IF82 309 aa7.71□□□□□ -1.18
CDH1-206ENST00000564676 STEAP1BQ6NZ63 245 aa7.71□□□□□ -1.18
CDH1-206ENST00000564676 ARRDC1Q8N5I2 433 aa7.71□□□□□ -1.18
CDH1-206ENST00000564676 SMIM4Q8WVI0 70 aa7.71□□□□□ -1.18
CDH1-206ENST00000564676 RSRP1Q9BUV0 290 aa7.71□□□□□ -1.18
CDH1-206ENST00000564676 NXF2Q9GZY0 626 aaKnown RBP7.71□□□□□ -1.18
CDH1-206ENST00000564676 ALX4Q9H161 411 aaPredicted RBP7.71□□□□□ -1.18
CDH1-206ENST00000564676 BET1LQ9NYM9 111 aa7.71□□□□□ -1.18
CDH1-206ENST00000564676 COMMD9Q9P000 198 aa7.71□□□□□ -1.18
CDH1-206ENST00000564676 NOTCH1P46531 2555 aa7.7□□□□□ -1.18
CDH1-206ENST00000564676 A0A0G2JLM5 398 aa7.7□□□□□ -1.18
CDH1-206ENST00000564676 HMX3A6NHT5 357 aa7.7□□□□□ -1.18
CDH1-206ENST00000564676 UPK2O00526 184 aa7.7□□□□□ -1.18
CDH1-206ENST00000564676 PRB2P02812 416 aaPredicted RBP7.7□□□□□ -1.18
CDH1-206ENST00000564676 CD74P04233 296 aa7.7□□□□□ -1.18
CDH1-206ENST00000564676 LGALS1P09382 135 aaKnown RBP7.7□□□□□ -1.18
CDH1-206ENST00000564676 HLA-GP17693 338 aa7.7□□□□□ -1.18
CDH1-206ENST00000564676 S100A5P33763 92 aa7.7□□□□□ -1.18
CDH1-206ENST00000564676 PPP5CP53041 499 aa7.7□□□□□ -1.18
CDH1-206ENST00000564676 MEF2DQ14814 521 aa7.7□□□□□ -1.18
CDH1-206ENST00000564676 POU2AF1Q16633 256 aa7.7□□□□□ -1.18
CDH1-206ENST00000564676 TBC1D26Q86UD7 250 aa7.7□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms