RNA–Protein interactions for RNA: ENST00000564399.1

VPS4A-203, Transcript of vacuolar protein sorting 4 homolog A, humanhuman

TSL 5

Gene VPS4A, Length 471 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS4A-203ENST00000564399 FABP7O15540 132 aa5.35□□□□□ -1.55
VPS4A-203ENST00000564399 FCGR3BO75015 233 aa5.35□□□□□ -1.55
VPS4A-203ENST00000564399 CA1P00915 261 aaPredicted RBP5.35□□□□□ -1.55
VPS4A-203ENST00000564399 REG1AP05451 166 aa5.35□□□□□ -1.55
VPS4A-203ENST00000564399 CTSDP07339 412 aaPredicted RBP5.35□□□□□ -1.55
VPS4A-203ENST00000564399 AREGP15514 252 aa5.35□□□□□ -1.55
VPS4A-203ENST00000564399 CELP19835 753 aa5.35□□□□□ -1.55
VPS4A-203ENST00000564399 HLA-DMBP28068 263 aa5.35□□□□□ -1.55
VPS4A-203ENST00000564399 PSMB6P28072 239 aa5.35□□□□□ -1.55
VPS4A-203ENST00000564399 ADMP35318 185 aa5.35□□□□□ -1.55
VPS4A-203ENST00000564399 TFPI2P48307 235 aa5.35□□□□□ -1.55
VPS4A-203ENST00000564399 PSMD7P51665 324 aa5.35□□□□□ -1.55
VPS4A-203ENST00000564399 TAS2R43P59537 309 aa5.35□□□□□ -1.55
VPS4A-203ENST00000564399 MRPS15P82914 257 aaKnown RBP5.35□□□□□ -1.55
VPS4A-203ENST00000564399 TMEM187Q14656 261 aa5.35□□□□□ -1.55
VPS4A-203ENST00000564399 ZNF124Q15973 351 aa5.35□□□□□ -1.55
VPS4A-203ENST00000564399 IGSF11Q5DX21 431 aa5.35□□□□□ -1.55
VPS4A-203ENST00000564399 OR2B11Q5JQS5 317 aa5.35□□□□□ -1.55
VPS4A-203ENST00000564399 C1orf100Q5SVJ3 147 aa5.35□□□□□ -1.55
VPS4A-203ENST00000564399 PVRIGQ6DKI7 326 aa5.35□□□□□ -1.55
VPS4A-203ENST00000564399 VKORC1L1Q8N0U8 176 aa5.35□□□□□ -1.55
VPS4A-203ENST00000564399 CBR4Q8N4T8 237 aa5.35□□□□□ -1.55
VPS4A-203ENST00000564399 ZNF645Q8N7E2 425 aa5.35□□□□□ -1.55
VPS4A-203ENST00000564399 APH1BQ8WW43 257 aa5.35□□□□□ -1.55
VPS4A-203ENST00000564399 ARHGAP5-AS1Q96IT6 56 aa5.35□□□□□ -1.55
VPS4A-203ENST00000564399 GINS4Q9BRT9 223 aa5.35□□□□□ -1.55
VPS4A-203ENST00000564399 C20orf24Q9BUV8 137 aa5.35□□□□□ -1.55
VPS4A-203ENST00000564399 LPAR5Q9H1C0 372 aa5.35□□□□□ -1.55
VPS4A-203ENST00000564399 OR51E2Q9H255 320 aa5.35□□□□□ -1.55
VPS4A-203ENST00000564399 DAZ1Q9NQZ3 744 aaKnown RBP5.35□□□□□ -1.55
VPS4A-203ENST00000564399 DIMT1Q9UNQ2 313 aaKnown RBP5.35□□□□□ -1.55
VPS4A-203ENST00000564399 PRELID3BQ9Y3B1 194 aa5.35□□□□□ -1.55
VPS4A-203ENST00000564399 DNAH11Q96DT5 4516 aa5.35□□□□□ -1.55
VPS4A-203ENST00000564399 DMBT1Q9UGM3 2413 aaPredicted RBP5.34□□□□□ -1.55
VPS4A-203ENST00000564399 IGHV3OR16-8A0A075B7F1 116 aa5.34□□□□□ -1.55
VPS4A-203ENST00000564399 TRBV6-7A0A0A0MS04 114 aa5.34□□□□□ -1.55
VPS4A-203ENST00000564399 LOC100130705A0A1B0GUX0 176 aa5.34□□□□□ -1.55
VPS4A-203ENST00000564399 E7EUB6 86 aa5.34□□□□□ -1.55
VPS4A-203ENST00000564399 J3QRK9 145 aa5.34□□□□□ -1.55
VPS4A-203ENST00000564399 RAB27BO00194 218 aa5.34□□□□□ -1.55
VPS4A-203ENST00000564399 ZNF207O43670 478 aaKnown RBP5.34□□□□□ -1.55
VPS4A-203ENST00000564399 MRPS14O60783 128 aaKnown RBP5.34□□□□□ -1.55
VPS4A-203ENST00000564399 WBP4O75554 376 aaKnown RBP5.34□□□□□ -1.55
VPS4A-203ENST00000564399 BPNT1O95861 308 aa5.34□□□□□ -1.55
VPS4A-203ENST00000564399 CRYGCP07315 174 aa5.34□□□□□ -1.55
VPS4A-203ENST00000564399 P0DMU3 169 aa5.34□□□□□ -1.55
VPS4A-203ENST00000564399 FAM231AP0DMU4 169 aa5.34□□□□□ -1.55
VPS4A-203ENST00000564399 FAM231CP0DMU5 169 aa5.34□□□□□ -1.55
VPS4A-203ENST00000564399 CRHBPP24387 322 aa5.34□□□□□ -1.55
VPS4A-203ENST00000564399 CMC4P56277 68 aaPredicted RBP5.34□□□□□ -1.55
VPS4A-203ENST00000564399 SOHLH1Q5JUK2 328 aa5.34□□□□□ -1.55
VPS4A-203ENST00000564399 RBM48Q5RL73 367 aaKnown RBP5.34□□□□□ -1.55
VPS4A-203ENST00000564399 Q6ZTC4 211 aa5.34□□□□□ -1.55
VPS4A-203ENST00000564399 SSX9Q7RTT3 188 aa5.34□□□□□ -1.55
VPS4A-203ENST00000564399 MAPKAPK5-AS1Q8N8E1 139 aa5.34□□□□□ -1.55
VPS4A-203ENST00000564399 VSTM2AQ8TAG5 236 aa5.34□□□□□ -1.55
VPS4A-203ENST00000564399 ZNF502Q8TBZ5 544 aa5.34□□□□□ -1.55
VPS4A-203ENST00000564399 PYDC1Q8WXC3 89 aa5.34□□□□□ -1.55
VPS4A-203ENST00000564399 TMEM190Q8WZ59 177 aa5.34□□□□□ -1.55
VPS4A-203ENST00000564399 TMEM80Q96HE8 168 aa5.34□□□□□ -1.55
VPS4A-203ENST00000564399 OR2A7Q96R45 310 aa5.34□□□□□ -1.55
VPS4A-203ENST00000564399 RNF126Q9BV68 326 aa5.34□□□□□ -1.55
VPS4A-203ENST00000564399 PECRQ9BY49 303 aa5.34□□□□□ -1.55
VPS4A-203ENST00000564399 HRH4Q9H3N8 390 aa5.34□□□□□ -1.55
VPS4A-203ENST00000564399 HSF4Q9ULV5 492 aa5.34□□□□□ -1.55
VPS4A-203ENST00000564399 MRPS7Q9Y2R9 242 aaKnown RBP5.34□□□□□ -1.55
VPS4A-203ENST00000564399 DNAH17Q9UFH2 4485 aa5.34□□□□□ -1.55
VPS4A-203ENST00000564399 DYNC1H1Q14204 4646 aaKnown RBP5.33□□□□□ -1.56
VPS4A-203ENST00000564399 IGKV3-7A0A075B6H7 116 aa5.33□□□□□ -1.56
VPS4A-203ENST00000564399 IGLV11-55A0A075B6I3 123 aa5.33□□□□□ -1.56
VPS4A-203ENST00000564399 IGLV2-18A0A075B6J9 118 aa5.33□□□□□ -1.56
VPS4A-203ENST00000564399 A0A1B0GW64 132 aa5.33□□□□□ -1.56
VPS4A-203ENST00000564399 OR2T8A6NH00 312 aa5.33□□□□□ -1.56
VPS4A-203ENST00000564399 TGOLN2O43493 480 aa5.33□□□□□ -1.56
VPS4A-203ENST00000564399 ATP8B1O43520 1251 aa5.33□□□□□ -1.56
VPS4A-203ENST00000564399 CIB2O75838 187 aa5.33□□□□□ -1.56
VPS4A-203ENST00000564399 KBTBD11O94819 623 aa5.33□□□□□ -1.56
VPS4A-203ENST00000564399 ZNF735P0CB33 412 aa5.33□□□□□ -1.56
VPS4A-203ENST00000564399 MAS1LP35410 378 aa5.33□□□□□ -1.56
VPS4A-203ENST00000564399 TMEM50BP56557 158 aa5.33□□□□□ -1.56
VPS4A-203ENST00000564399 QRFPP83859 136 aa5.33□□□□□ -1.56
VPS4A-203ENST00000564399 ARFRP1Q13795 201 aa5.33□□□□□ -1.56
VPS4A-203ENST00000564399 INSL4Q14641 139 aa5.33□□□□□ -1.56
VPS4A-203ENST00000564399 P2RY14Q15391 338 aa5.33□□□□□ -1.56
VPS4A-203ENST00000564399 LGALS9BQ3B8N2 356 aa5.33□□□□□ -1.56
VPS4A-203ENST00000564399 ACSM3Q53FZ2 586 aa5.33□□□□□ -1.56
VPS4A-203ENST00000564399 KCTD9Q7L273 389 aa5.33□□□□□ -1.56
VPS4A-203ENST00000564399 LRRTM1Q86UE6 522 aa5.33□□□□□ -1.56
VPS4A-203ENST00000564399 FAM89BQ8N5H3 189 aa5.33□□□□□ -1.56
VPS4A-203ENST00000564399 TMEM167AQ8TBQ9 72 aa5.33□□□□□ -1.56
VPS4A-203ENST00000564399 MAFIPQ8WZ33 124 aa5.33□□□□□ -1.56
VPS4A-203ENST00000564399 CABLES2Q9BTV7 478 aa5.33□□□□□ -1.56
VPS4A-203ENST00000564399 ZNF436Q9C0F3 470 aaPredicted RBP5.33□□□□□ -1.56
VPS4A-203ENST00000564399 PLGRKTQ9HBL7 147 aa5.33□□□□□ -1.56
VPS4A-203ENST00000564399 THYN1Q9P016 225 aa5.33□□□□□ -1.56
VPS4A-203ENST00000564399 DEFB131BA0A096LNP1 70 aa5.32□□□□□ -1.56
VPS4A-203ENST00000564399 IGHV4-28A0A0C4DH34 117 aa5.32□□□□□ -1.56
VPS4A-203ENST00000564399 C16orf90A8MZG2 172 aa5.32□□□□□ -1.56
VPS4A-203ENST00000564399 NDUFA4O00483 81 aa5.32□□□□□ -1.56
VPS4A-203ENST00000564399 IFNA10P01566 189 aa5.32□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms