RNA–Protein interactions for RNA: ENST00000562875.5

KARS-203, Transcript of lysyl-tRNA synthetase, humanhuman

TSL 3

Gene KARS, Length 801 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KARS-203ENST00000562875 RAB7AP51149 207 aa6.62□□□□□ -1.35
KARS-203ENST00000562875 SPCS3P61009 180 aa6.62□□□□□ -1.35
KARS-203ENST00000562875 PSG7Q13046 419 aa6.62□□□□□ -1.35
KARS-203ENST00000562875 HNF4GQ14541 408 aa6.62□□□□□ -1.35
KARS-203ENST00000562875 ZNF726P1Q15940 193 aa6.62□□□□□ -1.35
KARS-203ENST00000562875 VWC2Q2TAL6 325 aa6.62□□□□□ -1.35
KARS-203ENST00000562875 Q3ZCU0 254 aa6.62□□□□□ -1.35
KARS-203ENST00000562875 HES3Q5TGS1 186 aa6.62□□□□□ -1.35
KARS-203ENST00000562875 WDR25Q64LD2 544 aaPredicted RBP6.62□□□□□ -1.35
KARS-203ENST00000562875 C5orf24Q7Z6I8 188 aa6.62□□□□□ -1.35
KARS-203ENST00000562875 HIST3H2BBQ8N257 126 aa6.62□□□□□ -1.35
KARS-203ENST00000562875 TMEM105Q8N8V8 129 aa6.62□□□□□ -1.35
KARS-203ENST00000562875 ZNF383Q8NA42 475 aa6.62□□□□□ -1.35
KARS-203ENST00000562875 OR52E5Q8NH55 327 aa6.62□□□□□ -1.35
KARS-203ENST00000562875 KLF14Q8TD94 323 aaPredicted RBP6.62□□□□□ -1.35
KARS-203ENST00000562875 MRGPRDQ8TDS7 321 aa6.62□□□□□ -1.35
KARS-203ENST00000562875 RAB1CQ92928 201 aa6.62□□□□□ -1.35
KARS-203ENST00000562875 IMMP2LQ96T52 175 aa6.62□□□□□ -1.35
KARS-203ENST00000562875 TMEM204Q9BSN7 226 aa6.62□□□□□ -1.35
KARS-203ENST00000562875 PARLQ9H300 379 aa6.62□□□□□ -1.35
KARS-203ENST00000562875 VSIRQ9H7M9 311 aa6.62□□□□□ -1.35
KARS-203ENST00000562875 SPRR3Q9UBC9 169 aa6.62□□□□□ -1.35
KARS-203ENST00000562875 CLCF1Q9UBD9 225 aa6.62□□□□□ -1.35
KARS-203ENST00000562875 GNG12Q9UBI6 72 aa6.62□□□□□ -1.35
KARS-203ENST00000562875 FREM1Q5H8C1 2179 aa6.62□□□□□ -1.35
KARS-203ENST00000562875 MED12LQ86YW9 2145 aa6.62□□□□□ -1.35
KARS-203ENST00000562875 PTPRBP23467 1997 aa6.62□□□□□ -1.35
KARS-203ENST00000562875 LNP1A1A4G5 178 aa6.61□□□□□ -1.35
KARS-203ENST00000562875 C11orf94C9JXX5 98 aa6.61□□□□□ -1.35
KARS-203ENST00000562875 DVL1O14640 695 aa6.61□□□□□ -1.35
KARS-203ENST00000562875 RBFOX2O43251 390 aaKnown RBP eCLIP6.61□□□□□ -1.35
KARS-203ENST00000562875 ZNHIT1O43257 154 aa6.61□□□□□ -1.35
KARS-203ENST00000562875 CXorf1O96002 111 aa6.61□□□□□ -1.35
KARS-203ENST00000562875 IGHG3P01860 377 aa6.61□□□□□ -1.35
KARS-203ENST00000562875 CD1BP29016 333 aa6.61□□□□□ -1.35
KARS-203ENST00000562875 CCKARP32238 428 aa6.61□□□□□ -1.35
KARS-203ENST00000562875 TIRAPP58753 221 aa6.61□□□□□ -1.35
KARS-203ENST00000562875 RPL23P62829 140 aaKnown RBP6.61□□□□□ -1.35
KARS-203ENST00000562875 LCN2P80188 198 aa6.61□□□□□ -1.35
KARS-203ENST00000562875 PAX5Q02548 391 aa6.61□□□□□ -1.35
KARS-203ENST00000562875 COL10A1Q03692 680 aa6.61□□□□□ -1.35
KARS-203ENST00000562875 AESQ08117 197 aa6.61□□□□□ -1.35
KARS-203ENST00000562875 ARL16Q0P5N6 197 aa6.61□□□□□ -1.35
KARS-203ENST00000562875 IZUMO4Q1ZYL8 232 aa6.61□□□□□ -1.35
KARS-203ENST00000562875 TMEM249Q2WGJ8 235 aa6.61□□□□□ -1.35
KARS-203ENST00000562875 TMEM30BQ3MIR4 351 aa6.61□□□□□ -1.35
KARS-203ENST00000562875 ACSM6Q6P461 480 aa6.61□□□□□ -1.35
KARS-203ENST00000562875 WDR86Q86TI4 376 aa6.61□□□□□ -1.35
KARS-203ENST00000562875 HAPLN4Q86UW8 402 aa6.61□□□□□ -1.35
KARS-203ENST00000562875 OR52L2PQ8NGH6 319 aa6.61□□□□□ -1.35
KARS-203ENST00000562875 OR2T10Q8NGZ9 312 aa6.61□□□□□ -1.35
KARS-203ENST00000562875 OR1P1Q8NH06 330 aa6.61□□□□□ -1.35
KARS-203ENST00000562875 OR4S2Q8NH73 311 aa6.61□□□□□ -1.35
KARS-203ENST00000562875 TMEM18Q96B42 140 aa6.61□□□□□ -1.35
KARS-203ENST00000562875 ADTRPQ96IZ2 230 aa6.61□□□□□ -1.35
KARS-203ENST00000562875 PACRGQ96M98 296 aaPredicted RBP6.61□□□□□ -1.35
KARS-203ENST00000562875 UHRF2Q96PU4 802 aa6.61□□□□□ -1.35
KARS-203ENST00000562875 S1PR3Q99500 378 aa6.61□□□□□ -1.35
KARS-203ENST00000562875 SSX3Q99909 188 aa6.61□□□□□ -1.35
KARS-203ENST00000562875 SERTAD4Q9NUC0 356 aa6.61□□□□□ -1.35
KARS-203ENST00000562875 TINAGQ9UJW2 476 aa6.61□□□□□ -1.35
KARS-203ENST00000562875 PROCRQ9UNN8 238 aa6.61□□□□□ -1.35
KARS-203ENST00000562875 PSG11Q9UQ72 335 aa6.61□□□□□ -1.35
KARS-203ENST00000562875 CDH23Q9H251 3354 aa6.61□□□□□ -1.35
KARS-203ENST00000562875 LAMA3Q16787 3333 aa6.61□□□□□ -1.35
KARS-203ENST00000562875 HCFC1P51610 2035 aa6.6□□□□□ -1.35
KARS-203ENST00000562875 SHANK1Q9Y566 2161 aa6.6□□□□□ -1.35
KARS-203ENST00000562875 TRAV17A0A0B4J275 112 aa6.6□□□□□ -1.35
KARS-203ENST00000562875 A0A1W2PPQ1 181 aa6.6□□□□□ -1.35
KARS-203ENST00000562875 A8MXE2 369 aa6.6□□□□□ -1.35
KARS-203ENST00000562875 MGST3O14880 152 aa6.6□□□□□ -1.35
KARS-203ENST00000562875 YPEL1O60688 119 aa6.6□□□□□ -1.35
KARS-203ENST00000562875 GCGP01275 180 aa6.6□□□□□ -1.35
KARS-203ENST00000562875 IGKV3-15P01624 115 aa6.6□□□□□ -1.35
KARS-203ENST00000562875 P0C879 139 aa6.6□□□□□ -1.35
KARS-203ENST00000562875 SP9P0CG40 484 aa6.6□□□□□ -1.35
KARS-203ENST00000562875 CD59P13987 128 aa6.6□□□□□ -1.35
KARS-203ENST00000562875 HIST1H1BP16401 226 aaKnown RBP6.6□□□□□ -1.35
KARS-203ENST00000562875 NDUFB7P17568 137 aa6.6□□□□□ -1.35
KARS-203ENST00000562875 EGR1P18146 543 aa6.6□□□□□ -1.35
KARS-203ENST00000562875 OPRK1P41145 380 aa6.6□□□□□ -1.35
KARS-203ENST00000562875 TNFSF10P50591 281 aa6.6□□□□□ -1.35
KARS-203ENST00000562875 SELENOVP59797 346 aa6.6□□□□□ -1.35
KARS-203ENST00000562875 ERVS71-1P61550 626 aa6.6□□□□□ -1.35
KARS-203ENST00000562875 EDDM3AQ14507 147 aa6.6□□□□□ -1.35
KARS-203ENST00000562875 BTNL3Q6UXE8 466 aa6.6□□□□□ -1.35
KARS-203ENST00000562875 WDR82Q6UXN9 313 aa6.6□□□□□ -1.35
KARS-203ENST00000562875 SPNS3Q6ZMD2 512 aa6.6□□□□□ -1.35
KARS-203ENST00000562875 RPP25LQ8N5L8 163 aaKnown RBP6.6□□□□□ -1.35
KARS-203ENST00000562875 GCSAMQ8N6F7 178 aa6.6□□□□□ -1.35
KARS-203ENST00000562875 C11orf44Q8N8P7 122 aa6.6□□□□□ -1.35
KARS-203ENST00000562875 ZNF436-AS1Q8NC38 126 aaPredicted RBP6.6□□□□□ -1.35
KARS-203ENST00000562875 NECAP1Q8NC96 275 aa6.6□□□□□ -1.35
KARS-203ENST00000562875 UBALD1Q8TB05 177 aa6.6□□□□□ -1.35
KARS-203ENST00000562875 LRRC29Q8WV35 223 aa6.6□□□□□ -1.35
KARS-203ENST00000562875 TMEM170AQ8WVE7 144 aa6.6□□□□□ -1.35
KARS-203ENST00000562875 FRZBQ92765 325 aa6.6□□□□□ -1.35
KARS-203ENST00000562875 YPEL2Q96QA6 119 aa6.6□□□□□ -1.35
KARS-203ENST00000562875 GPR61Q9BZJ8 451 aa6.6□□□□□ -1.35
KARS-203ENST00000562875 OR6C3Q9NZP0 311 aa6.6□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms