RNA–Protein interactions for RNA: ENST00000562722.1

SF3B3-202, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 2

Gene SF3B3, Length 881 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-202ENST00000562722 CTXN2P0C2S0 81 aa9.77□□□□□ -0.85
SF3B3-202ENST00000562722 RAB3BP20337 219 aa9.77□□□□□ -0.85
SF3B3-202ENST00000562722 CBLN1P23435 193 aa9.77□□□□□ -0.85
SF3B3-202ENST00000562722 RPL30P62888 115 aaKnown RBP9.77□□□□□ -0.85
SF3B3-202ENST00000562722 CDNFQ49AH0 187 aa9.77□□□□□ -0.85
SF3B3-202ENST00000562722 FAM106AQ4KMX7 169 aa9.77□□□□□ -0.85
SF3B3-202ENST00000562722 ZNF57Q68EA5 555 aaPredicted RBP9.77□□□□□ -0.85
SF3B3-202ENST00000562722 CLEC19AQ6UXS0 136 aa9.77□□□□□ -0.85
SF3B3-202ENST00000562722 Q6ZS49 121 aa9.77□□□□□ -0.85
SF3B3-202ENST00000562722 ZNF367Q7RTV3 350 aa9.77□□□□□ -0.85
SF3B3-202ENST00000562722 OR52B4Q8NGK2 314 aa9.77□□□□□ -0.85
SF3B3-202ENST00000562722 EEF1AKMT3Q96AZ1 226 aa9.77□□□□□ -0.85
SF3B3-202ENST00000562722 ZC4H2Q9NQZ6 224 aa9.77□□□□□ -0.85
SF3B3-202ENST00000562722 SPATA2Q9UM82 520 aa9.77□□□□□ -0.85
SF3B3-202ENST00000562722 SMIM30A4D0T7 59 aa9.76□□□□□ -0.85
SF3B3-202ENST00000562722 NPIPB5A8MRT5 1133 aa9.76□□□□□ -0.85
SF3B3-202ENST00000562722 LGALS9O00182 355 aa9.76□□□□□ -0.85
SF3B3-202ENST00000562722 SCAF4O95104 1147 aaKnown RBP9.76□□□□□ -0.85
SF3B3-202ENST00000562722 NDUFB8O95169 186 aa9.76□□□□□ -0.85
SF3B3-202ENST00000562722 DEFA4P12838 97 aa9.76□□□□□ -0.85
SF3B3-202ENST00000562722 SSX9Q7RTT3 188 aa9.76□□□□□ -0.85
SF3B3-202ENST00000562722 GPHB5Q86YW7 130 aa9.76□□□□□ -0.85
SF3B3-202ENST00000562722 TMEM61Q8N0U2 210 aa9.76□□□□□ -0.85
SF3B3-202ENST00000562722 HSD17B10Q99714 261 aaKnown RBP9.76□□□□□ -0.85
SF3B3-202ENST00000562722 GGTLC1Q9BX51 225 aa9.76□□□□□ -0.85
SF3B3-202ENST00000562722 TAS2R8Q9NYW2 309 aa9.76□□□□□ -0.85
SF3B3-202ENST00000562722 IGKV1D-13A0A0B4J2D9 117 aa9.75□□□□□ -0.85
SF3B3-202ENST00000562722 CXorf65A6NEN9 183 aa9.75□□□□□ -0.85
SF3B3-202ENST00000562722 ANKRD65E5RJM6 399 aa9.75□□□□□ -0.85
SF3B3-202ENST00000562722 HLA-DQB1P01920 261 aa9.75□□□□□ -0.85
SF3B3-202ENST00000562722 REG1AP05451 166 aa9.75□□□□□ -0.85
SF3B3-202ENST00000562722 IL6RP08887 468 aaPredicted RBP9.75□□□□□ -0.85
SF3B3-202ENST00000562722 IGKV1-13P0DP09 117 aa9.75□□□□□ -0.85
SF3B3-202ENST00000562722 AREGP15514 252 aa9.75□□□□□ -0.85
SF3B3-202ENST00000562722 PSMB6P28072 239 aa9.75□□□□□ -0.85
SF3B3-202ENST00000562722 MAS1LP35410 378 aa9.75□□□□□ -0.85
SF3B3-202ENST00000562722 GNG2P59768 71 aa9.75□□□□□ -0.85
SF3B3-202ENST00000562722 PMS2P11Q13670 270 aa9.75□□□□□ -0.85
SF3B3-202ENST00000562722 SSX1Q16384 188 aa9.75□□□□□ -0.85
SF3B3-202ENST00000562722 ANKRD55Q3KP44 614 aa9.75□□□□□ -0.85
SF3B3-202ENST00000562722 HACD4Q5VWC8 232 aa9.75□□□□□ -0.85
SF3B3-202ENST00000562722 C22orf42Q6IC83 251 aa9.75□□□□□ -0.85
SF3B3-202ENST00000562722 OR4A47Q6IF82 309 aa9.75□□□□□ -0.85
SF3B3-202ENST00000562722 UXS1Q8NBZ7 420 aa9.75□□□□□ -0.85
SF3B3-202ENST00000562722 TMEM167AQ8TBQ9 72 aa9.75□□□□□ -0.85
SF3B3-202ENST00000562722 NUDCD2Q8WVJ2 157 aa9.75□□□□□ -0.85
SF3B3-202ENST00000562722 CCDC140Q96MF4 163 aa9.75□□□□□ -0.85
SF3B3-202ENST00000562722 SLC2A9Q9NRM0 540 aa9.75□□□□□ -0.85
SF3B3-202ENST00000562722 MLXQ9UH92 298 aa9.75□□□□□ -0.85
SF3B3-202ENST00000562722 DMRT1Q9Y5R6 373 aa9.75□□□□□ -0.85
SF3B3-202ENST00000562722 LOC102724200A0A096LPH7 203 aaPredicted RBP9.74□□□□□ -0.85
SF3B3-202ENST00000562722 TMEM213A2RRL7 107 aa9.74□□□□□ -0.85
SF3B3-202ENST00000562722 TMEM235A6NFC5 223 aa9.74□□□□□ -0.85
SF3B3-202ENST00000562722 E7EUB6 86 aa9.74□□□□□ -0.85
SF3B3-202ENST00000562722 HRASP01112 189 aa9.74□□□□□ -0.85
SF3B3-202ENST00000562722 HIST1H1BP16401 226 aaKnown RBP9.74□□□□□ -0.85
SF3B3-202ENST00000562722 RPL8P62917 257 aaKnown RBP9.74□□□□□ -0.85
SF3B3-202ENST00000562722 TBCEQ15813 527 aaPredicted RBP9.74□□□□□ -0.85
SF3B3-202ENST00000562722 CNIH2Q6PI25 160 aa9.74□□□□□ -0.85
SF3B3-202ENST00000562722 BTNL8Q6UX41 500 aa9.74□□□□□ -0.85
SF3B3-202ENST00000562722 RBPMS2Q6ZRY4 209 aaKnown RBP9.74□□□□□ -0.85
SF3B3-202ENST00000562722 PUSL1Q8N0Z8 303 aaKnown RBP9.74□□□□□ -0.85
SF3B3-202ENST00000562722 DCSTAMPQ9H295 470 aa9.74□□□□□ -0.85
SF3B3-202ENST00000562722 HRASLSQ9HDD0 168 aa9.74□□□□□ -0.85
SF3B3-202ENST00000562722 NDUFB11Q9NX14 153 aa9.74□□□□□ -0.85
SF3B3-202ENST00000562722 BLOC1S6Q9UL45 172 aa9.74□□□□□ -0.85
SF3B3-202ENST00000562722 TRDV1A0A1B0GX56 115 aa9.73□□□□□ -0.85
SF3B3-202ENST00000562722 A8MWP6 167 aa9.73□□□□□ -0.85
SF3B3-202ENST00000562722 TNFSF12O43508 249 aa9.73□□□□□ -0.85
SF3B3-202ENST00000562722 LY6G6CO95867 125 aa9.73□□□□□ -0.85
SF3B3-202ENST00000562722 IGLV2-14P01704 120 aa9.73□□□□□ -0.85
SF3B3-202ENST00000562722 ZNF735P0CB33 412 aa9.73□□□□□ -0.85
SF3B3-202ENST00000562722 MYOD1P15172 320 aa9.73□□□□□ -0.85
SF3B3-202ENST00000562722 HLA-GP17693 338 aa9.73□□□□□ -0.85
SF3B3-202ENST00000562722 ARPC4P59998 168 aa9.73□□□□□ -0.85
SF3B3-202ENST00000562722 ZNF66Q6ZN08 573 aa9.73□□□□□ -0.85
SF3B3-202ENST00000562722 MFSD4AQ8N468 514 aa9.73□□□□□ -0.85
SF3B3-202ENST00000562722 NRG4Q8WWG1 115 aa9.73□□□□□ -0.85
SF3B3-202ENST00000562722 CXorf58Q96LI9 332 aa9.73□□□□□ -0.85
SF3B3-202ENST00000562722 CNBD2Q96M20 576 aa9.73□□□□□ -0.85
SF3B3-202ENST00000562722 FANCD2OSQ96PS1 177 aa9.73□□□□□ -0.85
SF3B3-202ENST00000562722 GPHA2Q96T91 129 aa9.73□□□□□ -0.85
SF3B3-202ENST00000562722 OVOL2Q9BRP0 275 aa9.73□□□□□ -0.85
SF3B3-202ENST00000562722 ANXA10Q9UJ72 324 aa9.73□□□□□ -0.85
SF3B3-202ENST00000562722 TRBV7-1A0A0A6YYK4 115 aa9.72□□□□□ -0.85
SF3B3-202ENST00000562722 A0A1B0GW64 132 aa9.72□□□□□ -0.85
SF3B3-202ENST00000562722 MFSD2BA6NFX1 497 aa9.72□□□□□ -0.85
SF3B3-202ENST00000562722 SCGNO76038 276 aa9.72□□□□□ -0.85
SF3B3-202ENST00000562722 CLEC3BP05452 202 aa9.72□□□□□ -0.85
SF3B3-202ENST00000562722 CRYGCP07315 174 aa9.72□□□□□ -0.85
SF3B3-202ENST00000562722 GPR183P32249 361 aa9.72□□□□□ -0.85
SF3B3-202ENST00000562722 ZNF585BQ52M93 769 aa9.72□□□□□ -0.85
SF3B3-202ENST00000562722 TM4SF20Q53R12 229 aa9.72□□□□□ -0.85
SF3B3-202ENST00000562722 OR1L6Q8NGR2 347 aa9.72□□□□□ -0.85
SF3B3-202ENST00000562722 SECTM1Q8WVN6 248 aa9.72□□□□□ -0.85
SF3B3-202ENST00000562722 LINC00476Q8WZB0 136 aa9.72□□□□□ -0.85
SF3B3-202ENST00000562722 IGHV3-35A0A0C4DH35 117 aa9.71□□□□□ -0.86
SF3B3-202ENST00000562722 NOTOA8MTQ0 251 aa9.71□□□□□ -0.86
SF3B3-202ENST00000562722 CTRB1P17538 263 aa9.71□□□□□ -0.86
SF3B3-202ENST00000562722 CTRB2Q6GPI1 263 aa9.71□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms