RNA–Protein interactions for RNA: ENST00000562680.5

TCF4-216, Transcript of transcription factor 4, humanhuman

TSL 1 (best)

Gene TCF4, Length 5,733 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-216ENST00000562680 MRGPRFQ96AM1 343 aa6.38□□□□□ -1.39
TCF4-216ENST00000562680 ANAPC13Q9BS18 74 aa6.38□□□□□ -1.39
TCF4-216ENST00000562680 SLC35B3Q9H1N7 401 aa6.38□□□□□ -1.39
TCF4-216ENST00000562680 TRAV39A0A0B4J263 110 aa6.37□□□□□ -1.39
TCF4-216ENST00000562680 EMP1P54849 157 aa6.37□□□□□ -1.39
TCF4-216ENST00000562680 ELLP55199 621 aaPredicted RBP6.37□□□□□ -1.39
TCF4-216ENST00000562680 C20orf204Q6ZNR8 217 aa6.37□□□□□ -1.39
TCF4-216ENST00000562680 MMD2Q8IY49 270 aa6.37□□□□□ -1.39
TCF4-216ENST00000562680 OR8I2Q8N0Y5 310 aa6.37□□□□□ -1.39
TCF4-216ENST00000562680 OR5C1Q8NGR4 320 aa6.37□□□□□ -1.39
TCF4-216ENST00000562680 MPDZO75970 2070 aa6.37□□□□□ -1.39
TCF4-216ENST00000562680 H3BP45 60 aa6.37□□□□□ -1.39
TCF4-216ENST00000562680 EREGO14944 169 aa6.37□□□□□ -1.39
TCF4-216ENST00000562680 F12P00748 615 aaPredicted RBP6.37□□□□□ -1.39
TCF4-216ENST00000562680 WDR82Q6UXN9 313 aa6.37□□□□□ -1.39
TCF4-216ENST00000562680 WDR31Q8NA23 367 aa6.37□□□□□ -1.39
TCF4-216ENST00000562680 CLEC7AQ9BXN2 247 aa6.37□□□□□ -1.39
TCF4-216ENST00000562680 FBXL17Q9UF56 701 aa6.37□□□□□ -1.39
TCF4-216ENST00000562680 LOC105371242A0A075B767 164 aa6.37□□□□□ -1.39
TCF4-216ENST00000562680 NKX2-6A6NCS4 301 aa6.37□□□□□ -1.39
TCF4-216ENST00000562680 RAMP3O60896 148 aa6.37□□□□□ -1.39
TCF4-216ENST00000562680 PGLYRP1O75594 196 aaPredicted RBP6.37□□□□□ -1.39
TCF4-216ENST00000562680 PSG2P11465 335 aa6.37□□□□□ -1.39
TCF4-216ENST00000562680 LGALS7P47929 136 aa6.37□□□□□ -1.39
TCF4-216ENST00000562680 ZNF146Q15072 292 aa6.37□□□□□ -1.39
TCF4-216ENST00000562680 TTC32Q5I0X7 151 aa6.37□□□□□ -1.39
TCF4-216ENST00000562680 LYZL2Q7Z4W2 148 aa6.37□□□□□ -1.39
TCF4-216ENST00000562680 TMEM144Q7Z5S9 345 aa6.37□□□□□ -1.39
TCF4-216ENST00000562680 OR1P1Q8NH06 330 aa6.37□□□□□ -1.39
TCF4-216ENST00000562680 CACNA1BQ00975 2339 aa6.37□□□□□ -1.39
TCF4-216ENST00000562680 M0QZ24 198 aa6.37□□□□□ -1.39
TCF4-216ENST00000562680 RHBDL1O75783 438 aa6.37□□□□□ -1.39
TCF4-216ENST00000562680 CXCL3P19876 107 aa6.37□□□□□ -1.39
TCF4-216ENST00000562680 HTR1DP28221 377 aa6.37□□□□□ -1.39
TCF4-216ENST00000562680 GLIPR1P48060 266 aa6.37□□□□□ -1.39
TCF4-216ENST00000562680 PYY3Q5JQD4 70 aa6.37□□□□□ -1.39
TCF4-216ENST00000562680 CCL19Q99731 98 aa6.37□□□□□ -1.39
TCF4-216ENST00000562680 RASL11BQ9BPW5 248 aa6.37□□□□□ -1.39
TCF4-216ENST00000562680 FAM103A1Q9BTL3 118 aaKnown RBP6.37□□□□□ -1.39
TCF4-216ENST00000562680 A8MWP6 167 aa6.36□□□□□ -1.39
TCF4-216ENST00000562680 CORTO00230 105 aa6.36□□□□□ -1.39
TCF4-216ENST00000562680 NTF3P20783 257 aa6.36□□□□□ -1.39
TCF4-216ENST00000562680 JOSD1Q15040 202 aaPredicted RBP6.36□□□□□ -1.39
TCF4-216ENST00000562680 ZNF787Q6DD87 383 aa6.36□□□□□ -1.39
TCF4-216ENST00000562680 ZNF474Q6S9Z5 364 aaPredicted RBP6.36□□□□□ -1.39
TCF4-216ENST00000562680 DHRS11Q6UWP2 260 aa6.36□□□□□ -1.39
TCF4-216ENST00000562680 ASCL4Q6XD76 172 aa6.36□□□□□ -1.39
TCF4-216ENST00000562680 C19orf35Q6ZS72 473 aa6.36□□□□□ -1.39
TCF4-216ENST00000562680 OR1L4Q8NGR5 311 aa6.36□□□□□ -1.39
TCF4-216ENST00000562680 ATP5SQ99766 215 aa6.36□□□□□ -1.39
TCF4-216ENST00000562680 TLNRD1Q9H1K6 362 aa6.36□□□□□ -1.39
TCF4-216ENST00000562680 PIEZO1Q92508 2521 aa6.36□□□□□ -1.39
TCF4-216ENST00000562680 FAM24AA6NFZ4 105 aa6.36□□□□□ -1.39
TCF4-216ENST00000562680 C12orf77C9JDV5 145 aa6.36□□□□□ -1.39
TCF4-216ENST00000562680 SRP14P37108 136 aaKnown RBP6.36□□□□□ -1.39
TCF4-216ENST00000562680 CSN1S1P47710 185 aa6.36□□□□□ -1.39
TCF4-216ENST00000562680 H1FOOQ8IZA3 346 aaPredicted RBP6.36□□□□□ -1.39
TCF4-216ENST00000562680 TPRX1Q8N7U7 411 aa6.36□□□□□ -1.39
TCF4-216ENST00000562680 C5orf66Q9H5L9 145 aa6.36□□□□□ -1.39
TCF4-216ENST00000562680 TUBA4BQ9H853 241 aa6.36□□□□□ -1.39
TCF4-216ENST00000562680 COL6A6A6NMZ7 2263 aa6.36□□□□□ -1.39
TCF4-216ENST00000562680 TRAV30A0A087WSZ9 112 aa6.36□□□□□ -1.39
TCF4-216ENST00000562680 UBE2L5PA0A1B0GUS4 154 aa6.36□□□□□ -1.39
TCF4-216ENST00000562680 B4DEV8 164 aa6.36□□□□□ -1.39
TCF4-216ENST00000562680 CHST1O43916 411 aa6.36□□□□□ -1.39
TCF4-216ENST00000562680 COX7A2P2O60397 106 aa6.36□□□□□ -1.39
TCF4-216ENST00000562680 TPTE2P1Q5T6R2 138 aa6.36□□□□□ -1.39
TCF4-216ENST00000562680 ZNF562Q6V9R5 426 aa6.36□□□□□ -1.39
TCF4-216ENST00000562680 OR13C6PQ8NH95 151 aa6.36□□□□□ -1.39
TCF4-216ENST00000562680 TMEM230Q96A57 120 aa6.36□□□□□ -1.39
TCF4-216ENST00000562680 GFI1Q99684 422 aa6.36□□□□□ -1.39
TCF4-216ENST00000562680 KBTBD11-OT1A0A1B0GTJ5 212 aa6.36□□□□□ -1.39
TCF4-216ENST00000562680 DSCR9P59020 149 aa6.36□□□□□ -1.39
TCF4-216ENST00000562680 TMEM183AQ8IXX5 376 aa6.36□□□□□ -1.39
TCF4-216ENST00000562680 PAQR4Q8N4S7 273 aaPredicted RBP6.36□□□□□ -1.39
TCF4-216ENST00000562680 MRPL30Q8TCC3 161 aaKnown RBP6.36□□□□□ -1.39
TCF4-216ENST00000562680 PARP12Q9H0J9 701 aaKnown RBP6.36□□□□□ -1.39
TCF4-216ENST00000562680 PEF1Q9UBV8 284 aaKnown RBP6.36□□□□□ -1.39
TCF4-216ENST00000562680 SLC45A2Q9UMX9 530 aa6.36□□□□□ -1.39
TCF4-216ENST00000562680 TNFSF18Q9UNG2 199 aa6.36□□□□□ -1.39
TCF4-216ENST00000562680 NBASA2RRP1 2371 aa6.36□□□□□ -1.39
TCF4-216ENST00000562680 TRBV6-6A0A0A6YYG2 114 aa6.36□□□□□ -1.39
TCF4-216ENST00000562680 C22orf46C9J442 243 aa6.36□□□□□ -1.39
TCF4-216ENST00000562680 MPDU1O75352 247 aa6.36□□□□□ -1.39
TCF4-216ENST00000562680 NPY1RP25929 384 aa6.36□□□□□ -1.39
TCF4-216ENST00000562680 TNXAQ16473 311 aa6.36□□□□□ -1.39
TCF4-216ENST00000562680 PSMG3Q9BT73 122 aaPredicted RBP6.36□□□□□ -1.39
TCF4-216ENST00000562680 TRBV6-7A0A0A0MS04 114 aa6.35□□□□□ -1.39
TCF4-216ENST00000562680 A0A1W2PNU3 283 aaPredicted RBP6.35□□□□□ -1.39
TCF4-216ENST00000562680 IGHV1-46P01743 117 aa6.35□□□□□ -1.39
TCF4-216ENST00000562680 CXCL2P19875 107 aa6.35□□□□□ -1.39
TCF4-216ENST00000562680 TIGITQ495A1 244 aa6.35□□□□□ -1.39
TCF4-216ENST00000562680 DPPA3Q6W0C5 159 aa6.35□□□□□ -1.39
TCF4-216ENST00000562680 ZNF429Q86V71 674 aa6.35□□□□□ -1.39
TCF4-216ENST00000562680 OR52M1Q8NGK5 317 aa6.35□□□□□ -1.39
TCF4-216ENST00000562680 OR52E5Q8NH55 327 aa6.35□□□□□ -1.39
TCF4-216ENST00000562680 ARL2-SNX15V9GYD0 113 aa6.35□□□□□ -1.39
TCF4-216ENST00000562680 PGPEP1LA6NFU8 196 aa6.35□□□□□ -1.39
TCF4-216ENST00000562680 WNT9BO14905 357 aa6.35□□□□□ -1.39
TCF4-216ENST00000562680 FAM106CPP0CH98 169 aa6.35□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms