RNA–Protein interactions for RNA: ENST00000562540.1

DENND4A-205, Transcript of DENN domain containing 4A, humanhuman

TSL 2

Gene DENND4A, Length 629 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DENND4A-205ENST00000562540 C7orf50Q9BRJ6 194 aaKnown RBP0.75□□□□□ -2.29
DENND4A-205ENST00000562540 BBS2Q9BXC9 721 aa0.75□□□□□ -2.29
DENND4A-205ENST00000562540 WDR54Q9H977 334 aa0.75□□□□□ -2.29
DENND4A-205ENST00000562540 SPACA1Q9HBV2 294 aa0.75□□□□□ -2.29
DENND4A-205ENST00000562540 HRASLSQ9HDD0 168 aa0.75□□□□□ -2.29
DENND4A-205ENST00000562540 EXPH5Q8NEV8 1989 aa0.74□□□□□ -2.29
DENND4A-205ENST00000562540 ABCC12Q96J65 1359 aa0.74□□□□□ -2.29
DENND4A-205ENST00000562540 A0A0D9SEW6 157 aa0.74□□□□□ -2.29
DENND4A-205ENST00000562540 COX7A2LO14548 114 aa0.74□□□□□ -2.29
DENND4A-205ENST00000562540 MRPS14O60783 128 aaKnown RBP0.74□□□□□ -2.29
DENND4A-205ENST00000562540 IL3P08700 152 aa0.74□□□□□ -2.29
DENND4A-205ENST00000562540 DEFA4P12838 97 aa0.74□□□□□ -2.29
DENND4A-205ENST00000562540 CD40LGP29965 261 aa0.74□□□□□ -2.29
DENND4A-205ENST00000562540 CCR7P32248 378 aa0.74□□□□□ -2.29
DENND4A-205ENST00000562540 EMX1Q04741 257 aaPredicted RBP0.74□□□□□ -2.29
DENND4A-205ENST00000562540 CDK5R1Q15078 307 aa0.74□□□□□ -2.29
DENND4A-205ENST00000562540 LRRC75BQ2VPJ9 315 aa0.74□□□□□ -2.29
DENND4A-205ENST00000562540 CLEC6AQ6EIG7 209 aa0.74□□□□□ -2.29
DENND4A-205ENST00000562540 SBSNQ6UWP8 590 aa0.74□□□□□ -2.29
DENND4A-205ENST00000562540 HIST2H3AQ71DI3 136 aa0.74□□□□□ -2.29
DENND4A-205ENST00000562540 FAM19A5Q7Z5A7 132 aaPredicted RBP0.74□□□□□ -2.29
DENND4A-205ENST00000562540 OR7G1Q8NGA0 311 aa0.74□□□□□ -2.29
DENND4A-205ENST00000562540 OR2T27Q8NH04 317 aa0.74□□□□□ -2.29
DENND4A-205ENST00000562540 DNAJB3Q8WWF6 145 aa0.74□□□□□ -2.29
DENND4A-205ENST00000562540 MBD3L1Q8WWY6 194 aa0.74□□□□□ -2.29
DENND4A-205ENST00000562540 SMIM19Q96E16 107 aa0.74□□□□□ -2.29
DENND4A-205ENST00000562540 DHRS9Q9BPW9 319 aa0.74□□□□□ -2.29
DENND4A-205ENST00000562540 CHST6Q9GZX3 395 aa0.74□□□□□ -2.29
DENND4A-205ENST00000562540 GPR84Q9NQS5 396 aa0.74□□□□□ -2.29
DENND4A-205ENST00000562540 MED9Q9NWA0 146 aa0.74□□□□□ -2.29
DENND4A-205ENST00000562540 EURLQ9NYK6 297 aa0.74□□□□□ -2.29
DENND4A-205ENST00000562540 WDR90Q96KV7 1748 aa0.74□□□□□ -2.29
DENND4A-205ENST00000562540 BIRC5O15392 142 aa0.73□□□□□ -2.29
DENND4A-205ENST00000562540 TRGC1P0CF51 173 aa0.73□□□□□ -2.29
DENND4A-205ENST00000562540 MSNP26038 577 aaKnown RBP0.73□□□□□ -2.29
DENND4A-205ENST00000562540 HAAOP46952 286 aa0.73□□□□□ -2.29
DENND4A-205ENST00000562540 CDC34P49427 236 aaPredicted RBP0.73□□□□□ -2.29
DENND4A-205ENST00000562540 EVX1P49640 407 aa0.73□□□□□ -2.29
DENND4A-205ENST00000562540 CXCR4P61073 352 aa0.73□□□□□ -2.29
DENND4A-205ENST00000562540 POLR2GP62487 172 aaKnown RBP eCLIP0.73□□□□□ -2.29
DENND4A-205ENST00000562540 SKP1P63208 163 aa0.73□□□□□ -2.29
DENND4A-205ENST00000562540 MGAT3Q09327 533 aa0.73□□□□□ -2.29
DENND4A-205ENST00000562540 TMED1Q13445 227 aa0.73□□□□□ -2.29
DENND4A-205ENST00000562540 ELOBQ15370 118 aa0.73□□□□□ -2.29
DENND4A-205ENST00000562540 ARHGAP11BQ3KRB8 267 aa0.73□□□□□ -2.29
DENND4A-205ENST00000562540 ACSM3Q53FZ2 586 aa0.73□□□□□ -2.29
DENND4A-205ENST00000562540 FAM78BQ5VT40 261 aa0.73□□□□□ -2.29
DENND4A-205ENST00000562540 TNFAIP8L2Q6P589 184 aaPredicted RBP0.73□□□□□ -2.29
DENND4A-205ENST00000562540 SLC51BQ86UW2 128 aa0.73□□□□□ -2.29
DENND4A-205ENST00000562540 TMEM86AQ8N2M4 240 aa0.73□□□□□ -2.29
DENND4A-205ENST00000562540 TBC1D19Q8N5T2 526 aa0.73□□□□□ -2.29
DENND4A-205ENST00000562540 UBL4BQ8N7F7 174 aa0.73□□□□□ -2.29
DENND4A-205ENST00000562540 JOSD2Q8TAC2 188 aa0.73□□□□□ -2.29
DENND4A-205ENST00000562540 HAVCR2Q8TDQ0 301 aa0.73□□□□□ -2.29
DENND4A-205ENST00000562540 KCTD7Q96MP8 289 aa0.73□□□□□ -2.29
DENND4A-205ENST00000562540 ADAT1Q9BUB4 502 aaKnown RBP0.73□□□□□ -2.29
DENND4A-205ENST00000562540 CXorf21Q9HAI6 301 aa0.73□□□□□ -2.29
DENND4A-205ENST00000562540 XAGE1AQ9HD64 81 aa0.73□□□□□ -2.29
DENND4A-205ENST00000562540 FKBP14Q9NWM8 211 aa0.73□□□□□ -2.29
DENND4A-205ENST00000562540 PRELID1Q9Y255 219 aa0.73□□□□□ -2.29
DENND4A-205ENST00000562540 SNRNP200O75643 2136 aaKnown RBP0.73□□□□□ -2.29
DENND4A-205ENST00000562540 TRAPPC13A5PLN9 417 aa0.72□□□□□ -2.29
DENND4A-205ENST00000562540 MEIS3P1A6NDR6 274 aa0.72□□□□□ -2.29
DENND4A-205ENST00000562540 OR51F1A6NGY5 319 aa0.72□□□□□ -2.29
DENND4A-205ENST00000562540 PLA2G10O15496 165 aa0.72□□□□□ -2.29
DENND4A-205ENST00000562540 SSNA1O43805 119 aa0.72□□□□□ -2.29
DENND4A-205ENST00000562540 PPBPP02775 128 aa0.72□□□□□ -2.29
DENND4A-205ENST00000562540 PSMB6P28072 239 aa0.72□□□□□ -2.29
DENND4A-205ENST00000562540 CSN1S1P47710 185 aa0.72□□□□□ -2.29
DENND4A-205ENST00000562540 UBE2G2P60604 165 aa0.72□□□□□ -2.29
DENND4A-205ENST00000562540 PPP1R1AQ13522 171 aa0.72□□□□□ -2.29
DENND4A-205ENST00000562540 SURF2Q15527 256 aaPredicted RBP0.72□□□□□ -2.29
DENND4A-205ENST00000562540 CST9Q5W186 159 aa0.72□□□□□ -2.29
DENND4A-205ENST00000562540 PLEKHG7Q6ZR37 379 aa0.72□□□□□ -2.29
DENND4A-205ENST00000562540 DCXRQ7Z4W1 244 aa0.72□□□□□ -2.29
DENND4A-205ENST00000562540 Q8N402 240 aa0.72□□□□□ -2.29
DENND4A-205ENST00000562540 TMEM251Q8N6I4 163 aa0.72□□□□□ -2.29
DENND4A-205ENST00000562540 ZNF676Q8N7Q3 588 aa0.72□□□□□ -2.29
DENND4A-205ENST00000562540 OR8B3Q8NGG8 313 aa0.72□□□□□ -2.29
DENND4A-205ENST00000562540 EEF1AKMT1Q8WVE0 214 aa0.72□□□□□ -2.29
DENND4A-205ENST00000562540 TESCQ96BS2 214 aa0.72□□□□□ -2.29
DENND4A-205ENST00000562540 CMTM5Q96DZ9 223 aa0.72□□□□□ -2.29
DENND4A-205ENST00000562540 ERMAPQ96PL5 475 aaPredicted RBP0.72□□□□□ -2.29
DENND4A-205ENST00000562540 AK3Q9UIJ7 227 aa0.72□□□□□ -2.29
DENND4A-205ENST00000562540 DKKL1Q9UK85 242 aa0.72□□□□□ -2.29
DENND4A-205ENST00000562540 POLR1DQ9Y2S0 133 aa0.72□□□□□ -2.29
DENND4A-205ENST00000562540 CACNA1BQ00975 2339 aa0.72□□□□□ -2.29
DENND4A-205ENST00000562540 CCDC88AQ3V6T2 1871 aa0.71□□□□□ -2.3
DENND4A-205ENST00000562540 RAD50Q92878 1312 aa0.71□□□□□ -2.3
DENND4A-205ENST00000562540 IGKV2D-26A0A0A0MRZ7 120 aa0.71□□□□□ -2.3
DENND4A-205ENST00000562540 F5H768 121 aa0.71□□□□□ -2.3
DENND4A-205ENST00000562540 PFDN6O15212 129 aa0.71□□□□□ -2.3
DENND4A-205ENST00000562540 NSA2O95478 260 aaKnown RBP0.71□□□□□ -2.3
DENND4A-205ENST00000562540 HLA-DRAP01903 254 aa0.71□□□□□ -2.3
DENND4A-205ENST00000562540 CCL5P13501 91 aa0.71□□□□□ -2.3
DENND4A-205ENST00000562540 RAB13P51153 203 aa0.71□□□□□ -2.3
DENND4A-205ENST00000562540 PLCXD2Q0VAA5 305 aa0.71□□□□□ -2.3
DENND4A-205ENST00000562540 C1orf194Q5T5A4 169 aa0.71□□□□□ -2.3
DENND4A-205ENST00000562540 FAM173BQ6P4H8 233 aa0.71□□□□□ -2.3
DENND4A-205ENST00000562540 UMODL1-AS1Q8N2C9 162 aa0.71□□□□□ -2.3
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms