RNA–Protein interactions for RNA: ENST00000562118.1

CDH1-204, Transcript of cadherin 1, humanhuman

TSL 2

Gene CDH1, Length 952 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-204ENST00000562118 ZNF430Q9H8G1 570 aaPredicted RBP10.51□□□□□ -0.73
CDH1-204ENST00000562118 KLK9Q9UKQ9 250 aa10.51□□□□□ -0.73
CDH1-204ENST00000562118 VSIG4Q9Y279 399 aa10.51□□□□□ -0.73
CDH1-204ENST00000562118 WNK1Q9H4A3 2382 aa10.51□□□□□ -0.73
CDH1-204ENST00000562118 NAP1L6A6NFF2 107 aa10.5□□□□□ -0.73
CDH1-204ENST00000562118 CRYM-AS1A6NIL9 109 aa10.5□□□□□ -0.73
CDH1-204ENST00000562118 MARCH11A6NNE9 402 aa10.5□□□□□ -0.73
CDH1-204ENST00000562118 SOX15O60248 233 aa10.5□□□□□ -0.73
CDH1-204ENST00000562118 ELANEP08246 267 aa10.5□□□□□ -0.73
CDH1-204ENST00000562118 RPA2P15927 270 aa10.5□□□□□ -0.73
CDH1-204ENST00000562118 PI3P19957 117 aa10.5□□□□□ -0.73
CDH1-204ENST00000562118 UCP1P25874 307 aa10.5□□□□□ -0.73
CDH1-204ENST00000562118 CD40LGP29965 261 aa10.5□□□□□ -0.73
CDH1-204ENST00000562118 MAS1LP35410 378 aa10.5□□□□□ -0.73
CDH1-204ENST00000562118 KIAA0141Q14154 515 aaPredicted RBP10.5□□□□□ -0.73
CDH1-204ENST00000562118 PLGLAQ15195 96 aa10.5□□□□□ -0.73
CDH1-204ENST00000562118 ARSJQ5FYB0 599 aaPredicted RBP10.5□□□□□ -0.73
CDH1-204ENST00000562118 TEX38Q6PEX7 206 aa10.5□□□□□ -0.73
CDH1-204ENST00000562118 CENPVQ7Z7K6 275 aaPredicted RBP10.5□□□□□ -0.73
CDH1-204ENST00000562118 MMD2Q8IY49 270 aa10.5□□□□□ -0.73
CDH1-204ENST00000562118 VKORC1L1Q8N0U8 176 aa10.5□□□□□ -0.73
CDH1-204ENST00000562118 CCDC71LQ8N9Z2 235 aa10.5□□□□□ -0.73
CDH1-204ENST00000562118 POC5Q8NA72 575 aa10.5□□□□□ -0.73
CDH1-204ENST00000562118 GALNT14Q96FL9 552 aa10.5□□□□□ -0.73
CDH1-204ENST00000562118 SEC22AQ96IW7 307 aa10.5□□□□□ -0.73
CDH1-204ENST00000562118 TMEM68Q96MH6 324 aa10.5□□□□□ -0.73
CDH1-204ENST00000562118 TP53RKQ96S44 253 aa10.5□□□□□ -0.73
CDH1-204ENST00000562118 CITED2Q99967 270 aaPredicted RBP10.5□□□□□ -0.73
CDH1-204ENST00000562118 SLC25A21Q9BQT8 299 aaPredicted RBP10.5□□□□□ -0.73
CDH1-204ENST00000562118 C7orf50Q9BRJ6 194 aaKnown RBP10.5□□□□□ -0.73
CDH1-204ENST00000562118 PARP11Q9NR21 331 aa10.5□□□□□ -0.73
CDH1-204ENST00000562118 LINC00527Q9UJ94 153 aa10.5□□□□□ -0.73
CDH1-204ENST00000562118 DNAH3Q8TD57 4116 aa10.49□□□□□ -0.73
CDH1-204ENST00000562118 MGAM2Q2M2H8 2515 aa10.49□□□□□ -0.73
CDH1-204ENST00000562118 TRAV41A0A0B4J266 112 aa10.49□□□□□ -0.73
CDH1-204ENST00000562118 A0A1B0GW64 132 aa10.49□□□□□ -0.73
CDH1-204ENST00000562118 CGB1A6NKQ9 187 aa10.49□□□□□ -0.73
CDH1-204ENST00000562118 TEX22C9J3V5 150 aa10.49□□□□□ -0.73
CDH1-204ENST00000562118 G3V318 75 aa10.49□□□□□ -0.73
CDH1-204ENST00000562118 PGAM2P15259 253 aa10.49□□□□□ -0.73
CDH1-204ENST00000562118 VDAC1P21796 283 aa10.49□□□□□ -0.73
CDH1-204ENST00000562118 SLC35B1P78383 322 aa10.49□□□□□ -0.73
CDH1-204ENST00000562118 FXYD3Q14802 87 aa10.49□□□□□ -0.73
CDH1-204ENST00000562118 ZNF329Q86UD4 541 aa10.49□□□□□ -0.73
CDH1-204ENST00000562118 OR4X2Q8NGF9 303 aa10.49□□□□□ -0.73
CDH1-204ENST00000562118 R3HDM4Q96D70 268 aa10.49□□□□□ -0.73
CDH1-204ENST00000562118 TMEM140Q9NV12 185 aa10.49□□□□□ -0.73
CDH1-204ENST00000562118 TSSC4Q9Y5U2 329 aaPredicted RBP10.49□□□□□ -0.73
CDH1-204ENST00000562118 NBEAL1Q6ZS30 2694 aa10.48□□□□□ -0.73
CDH1-204ENST00000562118 C3orf85A0A1B0GTC6 90 aa10.48□□□□□ -0.73
CDH1-204ENST00000562118 H3BUA1 57 aa10.48□□□□□ -0.73
CDH1-204ENST00000562118 UPK2O00526 184 aa10.48□□□□□ -0.73
CDH1-204ENST00000562118 PLA2G10O15496 165 aa10.48□□□□□ -0.73
CDH1-204ENST00000562118 CDS2O95674 445 aa10.48□□□□□ -0.73
CDH1-204ENST00000562118 OPN1MWP04001 364 aa10.48□□□□□ -0.73
CDH1-204ENST00000562118 OPN1MW2P0DN77 364 aa10.48□□□□□ -0.73
CDH1-204ENST00000562118 OPN1MW3P0DN78 364 aa10.48□□□□□ -0.73
CDH1-204ENST00000562118 SLC6A1P30531 599 aa10.48□□□□□ -0.73
CDH1-204ENST00000562118 LPAR6P43657 344 aa10.48□□□□□ -0.73
CDH1-204ENST00000562118 SUPT4H1P63272 117 aaKnown RBP10.48□□□□□ -0.73
CDH1-204ENST00000562118 DHODHQ02127 395 aa10.48□□□□□ -0.73
CDH1-204ENST00000562118 TRIQKQ629K1 86 aa10.48□□□□□ -0.73
CDH1-204ENST00000562118 OR5M8Q8NGP6 311 aa10.48□□□□□ -0.73
CDH1-204ENST00000562118 GLYATL2Q8WU03 294 aa10.48□□□□□ -0.73
CDH1-204ENST00000562118 SRSF12Q8WXF0 261 aaKnown RBP10.48□□□□□ -0.73
CDH1-204ENST00000562118 SCGB3A2Q96PL1 93 aa10.48□□□□□ -0.73
CDH1-204ENST00000562118 CLCC1Q96S66 551 aa10.48□□□□□ -0.73
CDH1-204ENST00000562118 TMEM222Q9H0R3 208 aa10.48□□□□□ -0.73
CDH1-204ENST00000562118 NAA60Q9H7X0 242 aa10.48□□□□□ -0.73
CDH1-204ENST00000562118 ZFP57Q9NU63 452 aa10.48□□□□□ -0.73
CDH1-204ENST00000562118 FOXA2Q9Y261 457 aaPredicted RBP10.48□□□□□ -0.73
CDH1-204ENST00000562118 FBN3Q75N90 2809 aa10.47□□□□□ -0.73
CDH1-204ENST00000562118 E7EUB6 86 aa10.47□□□□□ -0.73
CDH1-204ENST00000562118 RPL23AP62750 156 aaKnown RBP10.47□□□□□ -0.73
CDH1-204ENST00000562118 RPL8P62917 257 aaKnown RBP10.47□□□□□ -0.73
CDH1-204ENST00000562118 TMEM267Q0VDI3 215 aaPredicted RBP10.47□□□□□ -0.73
CDH1-204ENST00000562118 C2orf68Q2NKX9 166 aa10.47□□□□□ -0.73
CDH1-204ENST00000562118 AARDQ4LEZ3 155 aa10.47□□□□□ -0.73
CDH1-204ENST00000562118 TMEM56Q96MV1 263 aa10.47□□□□□ -0.73
CDH1-204ENST00000562118 SRSF8Q9BRL6 282 aaKnown RBP10.47□□□□□ -0.73
CDH1-204ENST00000562118 FAM103A1Q9BTL3 118 aaKnown RBP10.47□□□□□ -0.73
CDH1-204ENST00000562118 WDR12Q9GZL7 423 aaKnown RBP10.47□□□□□ -0.73
CDH1-204ENST00000562118 TMEM14BQ9NUH8 114 aa10.47□□□□□ -0.73
CDH1-204ENST00000562118 MCUBQ9NWR8 336 aa10.47□□□□□ -0.73
CDH1-204ENST00000562118 COPZ2Q9P299 210 aa10.47□□□□□ -0.73
CDH1-204ENST00000562118 C14orf166Q9Y224 244 aaKnown RBP10.47□□□□□ -0.73
CDH1-204ENST00000562118 TMEM56-RWDD3S4R434 201 aa10.47□□□□□ -0.73
CDH1-204ENST00000562118 TRAV3A0A0B4J244 114 aa10.46□□□□□ -0.73
CDH1-204ENST00000562118 M0QZ24 198 aa10.46□□□□□ -0.73
CDH1-204ENST00000562118 NDUFB6O95139 128 aa10.46□□□□□ -0.73
CDH1-204ENST00000562118 IGKV1-5P01602 117 aa10.46□□□□□ -0.73
CDH1-204ENST00000562118 HLA-GP17693 338 aa10.46□□□□□ -0.73
CDH1-204ENST00000562118 CDX1P47902 265 aaPredicted RBP10.46□□□□□ -0.73
CDH1-204ENST00000562118 OR2B8PP59922 312 aa10.46□□□□□ -0.73
CDH1-204ENST00000562118 RUNX1Q01196 453 aa10.46□□□□□ -0.73
CDH1-204ENST00000562118 RBMS2Q15434 407 aaKnown RBP10.46□□□□□ -0.73
CDH1-204ENST00000562118 C10orf55Q5SWW7 151 aa10.46□□□□□ -0.73
CDH1-204ENST00000562118 ZNF57Q68EA5 555 aaPredicted RBP10.46□□□□□ -0.73
CDH1-204ENST00000562118 C11orf44Q8N8P7 122 aa10.46□□□□□ -0.73
CDH1-204ENST00000562118 ADAD2Q8NCV1 583 aaKnown RBP10.46□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms