RNA–Protein interactions for RNA: ENST00000561266.5

TPM1-230, Transcript of tropomyosin 1, humanhuman

TSL 3

Gene TPM1, Length 671 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-230ENST00000561266 SRSF12Q8WXF0 261 aaKnown RBP10.78□□□□□ -0.68
TPM1-230ENST00000561266 OR2A7Q96R45 310 aa10.78□□□□□ -0.68
TPM1-230ENST00000561266 FABP12A6NFH5 140 aa10.77□□□□□ -0.69
TPM1-230ENST00000561266 HMX3A6NHT5 357 aa10.77□□□□□ -0.69
TPM1-230ENST00000561266 TEX22C9J3V5 150 aa10.77□□□□□ -0.69
TPM1-230ENST00000561266 CCL24O00175 119 aa10.77□□□□□ -0.69
TPM1-230ENST00000561266 RBFOX2O43251 390 aaKnown RBP eCLIP10.77□□□□□ -0.69
TPM1-230ENST00000561266 GSTZ1O43708 216 aaPredicted RBP10.77□□□□□ -0.69
TPM1-230ENST00000561266 RAB3DO95716 219 aa10.77□□□□□ -0.69
TPM1-230ENST00000561266 IGKV1-39P01597 117 aa10.77□□□□□ -0.69
TPM1-230ENST00000561266 PF4P02776 101 aa10.77□□□□□ -0.69
TPM1-230ENST00000561266 PRB2P02812 416 aaPredicted RBP10.77□□□□□ -0.69
TPM1-230ENST00000561266 IGKV1D-39P04432 117 aa10.77□□□□□ -0.69
TPM1-230ENST00000561266 KIR2DS2P43631 304 aa10.77□□□□□ -0.69
TPM1-230ENST00000561266 LPAR6P43657 344 aa10.77□□□□□ -0.69
TPM1-230ENST00000561266 DEFA6Q01524 100 aa10.77□□□□□ -0.69
TPM1-230ENST00000561266 TMEM267Q0VDI3 215 aaPredicted RBP10.77□□□□□ -0.69
TPM1-230ENST00000561266 BEAN1Q3B7T3 259 aa10.77□□□□□ -0.69
TPM1-230ENST00000561266 OR4A47Q6IF82 309 aa10.77□□□□□ -0.69
TPM1-230ENST00000561266 TBC1D26Q86UD7 250 aa10.77□□□□□ -0.69
TPM1-230ENST00000561266 CCDC190Q86UF4 302 aa10.77□□□□□ -0.69
TPM1-230ENST00000561266 OR4C16Q8NGL9 310 aa10.77□□□□□ -0.69
TPM1-230ENST00000561266 C15orf40Q8WUR7 153 aa10.77□□□□□ -0.69
TPM1-230ENST00000561266 C4orf3Q8WVX3 66 aa10.77□□□□□ -0.69
TPM1-230ENST00000561266 ANKRD20A5PA0PJZ0 165 aa10.76□□□□□ -0.69
TPM1-230ENST00000561266 HPRT1P00492 218 aa10.76□□□□□ -0.69
TPM1-230ENST00000561266 IGHV3-11P01762 117 aa10.76□□□□□ -0.69
TPM1-230ENST00000561266 PRH1P02810 166 aa10.76□□□□□ -0.69
TPM1-230ENST00000561266 F2RP25116 425 aa10.76□□□□□ -0.69
TPM1-230ENST00000561266 MYCNOSP40205 109 aa10.76□□□□□ -0.69
TPM1-230ENST00000561266 PPP5CP53041 499 aa10.76□□□□□ -0.69
TPM1-230ENST00000561266 TAS2R19P59542 299 aa10.76□□□□□ -0.69
TPM1-230ENST00000561266 MRPS10P82664 201 aaKnown RBP10.76□□□□□ -0.69
TPM1-230ENST00000561266 CATR1Q13166 79 aa10.76□□□□□ -0.69
TPM1-230ENST00000561266 POU2AF1Q16633 256 aa10.76□□□□□ -0.69
TPM1-230ENST00000561266 TMEM65Q6PI78 240 aa10.76□□□□□ -0.69
TPM1-230ENST00000561266 MMD2Q8IY49 270 aa10.76□□□□□ -0.69
TPM1-230ENST00000561266 TCTEX1D1Q8N7M0 179 aa10.76□□□□□ -0.69
TPM1-230ENST00000561266 ADAD2Q8NCV1 583 aaKnown RBP10.76□□□□□ -0.69
TPM1-230ENST00000561266 DGCR14Q96DF8 476 aaKnown RBP10.76□□□□□ -0.69
TPM1-230ENST00000561266 UBE2E2Q96LR5 201 aa10.76□□□□□ -0.69
TPM1-230ENST00000561266 PRKDCP78527 4128 aaKnown RBP10.75□□□□□ -0.69
TPM1-230ENST00000561266 UPK2O00526 184 aa10.75□□□□□ -0.69
TPM1-230ENST00000561266 HRASP01112 189 aa10.75□□□□□ -0.69
TPM1-230ENST00000561266 CD33P20138 364 aa10.75□□□□□ -0.69
TPM1-230ENST00000561266 TBPP20226 339 aa10.75□□□□□ -0.69
TPM1-230ENST00000561266 TAS2R31P59538 309 aa10.75□□□□□ -0.69
TPM1-230ENST00000561266 ZNF45Q02386 682 aa10.75□□□□□ -0.69
TPM1-230ENST00000561266 SSBP1Q04837 148 aaKnown RBP10.75□□□□□ -0.69
TPM1-230ENST00000561266 FHL3Q13643 280 aa10.75□□□□□ -0.69
TPM1-230ENST00000561266 ARRDC1Q8N5I2 433 aa10.75□□□□□ -0.69
TPM1-230ENST00000561266 POC5Q8NA72 575 aa10.75□□□□□ -0.69
TPM1-230ENST00000561266 OR5M8Q8NGP6 311 aa10.75□□□□□ -0.69
TPM1-230ENST00000561266 OR13C8Q8NGS7 320 aa10.75□□□□□ -0.69
TPM1-230ENST00000561266 TERB2Q8NHR7 220 aa10.75□□□□□ -0.69
TPM1-230ENST00000561266 MARCH1Q8TCQ1 289 aa10.75□□□□□ -0.69
TPM1-230ENST00000561266 TRIM63Q969Q1 353 aa10.75□□□□□ -0.69
TPM1-230ENST00000561266 PLEKHA2Q9HB19 425 aa10.75□□□□□ -0.69
TPM1-230ENST00000561266 SLC2A9Q9NRM0 540 aa10.75□□□□□ -0.69
TPM1-230ENST00000561266 TMEM140Q9NV12 185 aa10.75□□□□□ -0.69
TPM1-230ENST00000561266 BET1LQ9NYM9 111 aa10.75□□□□□ -0.69
TPM1-230ENST00000561266 VSIG4Q9Y279 399 aa10.75□□□□□ -0.69
TPM1-230ENST00000561266 WIPF1O43516 503 aa10.74□□□□□ -0.69
TPM1-230ENST00000561266 TRGV3P03979 118 aa10.74□□□□□ -0.69
TPM1-230ENST00000561266 IFNA6P05013 189 aa10.74□□□□□ -0.69
TPM1-230ENST00000561266 OR9G9P0C7N8 305 aa10.74□□□□□ -0.69
TPM1-230ENST00000561266 PGAM2P15259 253 aa10.74□□□□□ -0.69
TPM1-230ENST00000561266 AREGP15514 252 aa10.74□□□□□ -0.69
TPM1-230ENST00000561266 NQO2P16083 231 aa10.74□□□□□ -0.69
TPM1-230ENST00000561266 G6PCP35575 357 aa10.74□□□□□ -0.69
TPM1-230ENST00000561266 TPPP2P59282 170 aa10.74□□□□□ -0.69
TPM1-230ENST00000561266 RUNX1Q01196 453 aa10.74□□□□□ -0.69
TPM1-230ENST00000561266 SCGB2B2Q4G0G5 96 aa10.74□□□□□ -0.69
TPM1-230ENST00000561266 KPRPQ5T749 579 aaPredicted RBP10.74□□□□□ -0.69
TPM1-230ENST00000561266 CMTM1Q8IZ96 169 aa10.74□□□□□ -0.69
TPM1-230ENST00000561266 SLC38A6Q8IZM9 456 aa10.74□□□□□ -0.69
TPM1-230ENST00000561266 OR11H1Q8NG94 326 aa10.74□□□□□ -0.69
TPM1-230ENST00000561266 OR6Q1Q8NGQ2 317 aa10.74□□□□□ -0.69
TPM1-230ENST00000561266 TP53RKQ96S44 253 aa10.74□□□□□ -0.69
TPM1-230ENST00000561266 PHB2Q99623 299 aa10.74□□□□□ -0.69
TPM1-230ENST00000561266 RTBDNQ9BSG5 229 aaPredicted RBP10.74□□□□□ -0.69
TPM1-230ENST00000561266 THAP7Q9BT49 309 aaPredicted RBP10.74□□□□□ -0.69
TPM1-230ENST00000561266 ZNF355PQ9NSJ1 428 aa10.74□□□□□ -0.69
TPM1-230ENST00000561266 NSG2Q9Y328 171 aa10.74□□□□□ -0.69
TPM1-230ENST00000561266 IGHV4OR15-8A0A075B7B6 117 aa10.73□□□□□ -0.69
TPM1-230ENST00000561266 A0A087WW49 117 aa10.73□□□□□ -0.69
TPM1-230ENST00000561266 DBX1A6NMT0 343 aa10.73□□□□□ -0.69
TPM1-230ENST00000561266 MPPED1O15442 326 aa10.73□□□□□ -0.69
TPM1-230ENST00000561266 KRASP01116 189 aa10.73□□□□□ -0.69
TPM1-230ENST00000561266 AKAIN1P0CW23 69 aa10.73□□□□□ -0.69
TPM1-230ENST00000561266 SLC6A1P30531 599 aa10.73□□□□□ -0.69
TPM1-230ENST00000561266 RPL27AP46776 148 aaKnown RBP10.73□□□□□ -0.69
TPM1-230ENST00000561266 PIGPP57054 158 aa10.73□□□□□ -0.69
TPM1-230ENST00000561266 OR2B8PP59922 312 aa10.73□□□□□ -0.69
TPM1-230ENST00000561266 RND3P61587 244 aa10.73□□□□□ -0.69
TPM1-230ENST00000561266 RPL8P62917 257 aaKnown RBP10.73□□□□□ -0.69
TPM1-230ENST00000561266 KLF9Q13886 244 aaPredicted RBP10.73□□□□□ -0.69
TPM1-230ENST00000561266 IZUMO4Q1ZYL8 232 aa10.73□□□□□ -0.69
TPM1-230ENST00000561266 PYDC2Q56P42 97 aa10.73□□□□□ -0.69
TPM1-230ENST00000561266 LPCAT3Q6P1A2 487 aa10.73□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 87.5 ms