RNA–Protein interactions for RNA: ENST00000561253.5

LRRC28-220, Transcript of leucine rich repeat containing 28, humanhuman

TSL 4

Gene LRRC28, Length 574 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-220ENST00000561253 SOX6P35712 828 aa4.72□□□□□ -1.65
LRRC28-220ENST00000561253 PPP1CCP36873 323 aaKnown RBP4.72□□□□□ -1.65
LRRC28-220ENST00000561253 SRP14P37108 136 aaKnown RBP4.72□□□□□ -1.65
LRRC28-220ENST00000561253 ETV6P41212 452 aa4.72□□□□□ -1.65
LRRC28-220ENST00000561253 DYNLT3P51808 116 aa4.72□□□□□ -1.65
LRRC28-220ENST00000561253 PITPNAQ00169 270 aa4.72□□□□□ -1.65
LRRC28-220ENST00000561253 ZNF415Q09FC8 603 aa4.72□□□□□ -1.65
LRRC28-220ENST00000561253 AANATQ16613 207 aa4.72□□□□□ -1.65
LRRC28-220ENST00000561253 TMEM69Q5SWH9 247 aa4.72□□□□□ -1.65
LRRC28-220ENST00000561253 RBMS3Q6XE24 437 aaKnown RBP4.72□□□□□ -1.65
LRRC28-220ENST00000561253 TRPT1Q86TN4 253 aaKnown RBP4.72□□□□□ -1.65
LRRC28-220ENST00000561253 H1FOOQ8IZA3 346 aaPredicted RBP4.72□□□□□ -1.65
LRRC28-220ENST00000561253 SIGLECL1Q8N7X8 197 aa4.72□□□□□ -1.65
LRRC28-220ENST00000561253 OR11H4Q8NGC9 324 aa4.72□□□□□ -1.65
LRRC28-220ENST00000561253 OR10V1Q8NGI7 309 aa4.72□□□□□ -1.65
LRRC28-220ENST00000561253 OR4A4PQ8NGN8 299 aa4.72□□□□□ -1.65
LRRC28-220ENST00000561253 OR9G1Q8NH87 305 aa4.72□□□□□ -1.65
LRRC28-220ENST00000561253 MCFD2Q8NI22 146 aa4.72□□□□□ -1.65
LRRC28-220ENST00000561253 FCAMRQ8WWV6 532 aa4.72□□□□□ -1.65
LRRC28-220ENST00000561253 YPEL2Q96QA6 119 aa4.72□□□□□ -1.65
LRRC28-220ENST00000561253 OR2S2Q9NQN1 319 aa4.72□□□□□ -1.65
LRRC28-220ENST00000561253 DIABLOQ9NR28 239 aa4.72□□□□□ -1.65
LRRC28-220ENST00000561253 DPM3Q9P2X0 92 aa4.72□□□□□ -1.65
LRRC28-220ENST00000561253 EXTL2Q9UBQ6 330 aa4.72□□□□□ -1.65
LRRC28-220ENST00000561253 MGAT4AQ9UM21 535 aa4.72□□□□□ -1.65
LRRC28-220ENST00000561253 TBL2Q9Y4P3 447 aaKnown RBP4.72□□□□□ -1.65
LRRC28-220ENST00000561253 DNAH3Q8TD57 4116 aa4.72□□□□□ -1.65
LRRC28-220ENST00000561253 NOTCH1P46531 2555 aa4.72□□□□□ -1.65
LRRC28-220ENST00000561253 NOTCH3Q9UM47 2321 aa4.71□□□□□ -1.66
LRRC28-220ENST00000561253 IGLV9-49A0A0B4J1Y8 123 aa4.71□□□□□ -1.66
LRRC28-220ENST00000561253 IGKV1D-13A0A0B4J2D9 117 aa4.71□□□□□ -1.66
LRRC28-220ENST00000561253 A0A1W2PPE3 182 aa4.71□□□□□ -1.66
LRRC28-220ENST00000561253 SMIM1B2RUZ4 78 aa4.71□□□□□ -1.66
LRRC28-220ENST00000561253 SULT1C2O00338 296 aa4.71□□□□□ -1.66
LRRC28-220ENST00000561253 SDCBPO00560 298 aaPredicted RBP4.71□□□□□ -1.66
LRRC28-220ENST00000561253 CTDSPLO15194 276 aa4.71□□□□□ -1.66
LRRC28-220ENST00000561253 NOL3O60936 208 aaKnown RBP4.71□□□□□ -1.66
LRRC28-220ENST00000561253 IGHV4-59P01825 116 aa4.71□□□□□ -1.66
LRRC28-220ENST00000561253 ARG1P05089 322 aa4.71□□□□□ -1.66
LRRC28-220ENST00000561253 FBP1P09467 338 aa4.71□□□□□ -1.66
LRRC28-220ENST00000561253 IGKV1-13P0DP09 117 aa4.71□□□□□ -1.66
LRRC28-220ENST00000561253 NFYBP25208 207 aa4.71□□□□□ -1.66
LRRC28-220ENST00000561253 HTR1DP28221 377 aa4.71□□□□□ -1.66
LRRC28-220ENST00000561253 KIR2DS4P43632 304 aa4.71□□□□□ -1.66
LRRC28-220ENST00000561253 IER3P46695 156 aa4.71□□□□□ -1.66
LRRC28-220ENST00000561253 LINC01547P58512 204 aaPredicted RBP4.71□□□□□ -1.66
LRRC28-220ENST00000561253 ZNF816Q0VGE8 651 aaPredicted RBP4.71□□□□□ -1.66
LRRC28-220ENST00000561253 MADCAM1Q13477 382 aa4.71□□□□□ -1.66
LRRC28-220ENST00000561253 EIF4EBP1Q13541 118 aaPredicted RBP4.71□□□□□ -1.66
LRRC28-220ENST00000561253 ARFRP1Q13795 201 aa4.71□□□□□ -1.66
LRRC28-220ENST00000561253 KIR2DS1Q14954 304 aa4.71□□□□□ -1.66
LRRC28-220ENST00000561253 SLC9A3R2Q15599 337 aa4.71□□□□□ -1.66
LRRC28-220ENST00000561253 ZNF79Q15937 498 aa4.71□□□□□ -1.66
LRRC28-220ENST00000561253 LTC4SQ16873 150 aa4.71□□□□□ -1.66
LRRC28-220ENST00000561253 CNPY1Q3B7I2 92 aa4.71□□□□□ -1.66
LRRC28-220ENST00000561253 TPTE2P1Q5T6R2 138 aa4.71□□□□□ -1.66
LRRC28-220ENST00000561253 PET117Q6UWS5 81 aa4.71□□□□□ -1.66
LRRC28-220ENST00000561253 CCBE1Q6UXH8 406 aaPredicted RBP4.71□□□□□ -1.66
LRRC28-220ENST00000561253 TMEM86BQ8N661 226 aa4.71□□□□□ -1.66
LRRC28-220ENST00000561253 ZNF383Q8NA42 475 aa4.71□□□□□ -1.66
LRRC28-220ENST00000561253 BEST4Q8NFU0 473 aa4.71□□□□□ -1.66
LRRC28-220ENST00000561253 OR6Q1Q8NGQ2 317 aa4.71□□□□□ -1.66
LRRC28-220ENST00000561253 PHLDA1Q8WV24 401 aaPredicted RBP4.71□□□□□ -1.66
LRRC28-220ENST00000561253 SMIM4Q8WVI0 70 aa4.71□□□□□ -1.66
LRRC28-220ENST00000561253 GALMQ96C23 342 aa4.71□□□□□ -1.66
LRRC28-220ENST00000561253 MALSU1Q96EH3 234 aa4.71□□□□□ -1.66
LRRC28-220ENST00000561253 SDHCQ99643 169 aaPredicted RBP4.71□□□□□ -1.66
LRRC28-220ENST00000561253 C6orf62Q9GZU0 229 aaPredicted RBP4.71□□□□□ -1.66
LRRC28-220ENST00000561253 SDF2L1Q9HCN8 221 aa4.71□□□□□ -1.66
LRRC28-220ENST00000561253 KCNIP1Q9NZI2 227 aa4.71□□□□□ -1.66
LRRC28-220ENST00000561253 GNG12Q9UBI6 72 aa4.71□□□□□ -1.66
LRRC28-220ENST00000561253 MTFP1Q9UDX5 166 aa4.71□□□□□ -1.66
LRRC28-220ENST00000561253 ANXA10Q9UJ72 324 aa4.71□□□□□ -1.66
LRRC28-220ENST00000561253 MEIS3P1A6NDR6 274 aa4.7□□□□□ -1.66
LRRC28-220ENST00000561253 A6NDX4 124 aa4.7□□□□□ -1.66
LRRC28-220ENST00000561253 CCDC160A6NGH7 325 aa4.7□□□□□ -1.66
LRRC28-220ENST00000561253 OOSP1A8MZH6 123 aa4.7□□□□□ -1.66
LRRC28-220ENST00000561253 GABARAPH6UMI1 98 aa4.7□□□□□ -1.66
LRRC28-220ENST00000561253 ATP6V0E1O15342 81 aa4.7□□□□□ -1.66
LRRC28-220ENST00000561253 RGS5O15539 181 aa4.7□□□□□ -1.66
LRRC28-220ENST00000561253 GSTZ1O43708 216 aaPredicted RBP4.7□□□□□ -1.66
LRRC28-220ENST00000561253 LANCL1O43813 399 aa4.7□□□□□ -1.66
LRRC28-220ENST00000561253 CD74P04233 296 aa4.7□□□□□ -1.66
LRRC28-220ENST00000561253 CSN3P07498 182 aa4.7□□□□□ -1.66
LRRC28-220ENST00000561253 ZBTB25P24278 435 aa4.7□□□□□ -1.66
LRRC28-220ENST00000561253 PRSS3P35030 304 aa4.7□□□□□ -1.66
LRRC28-220ENST00000561253 CBX5P45973 191 aa4.7□□□□□ -1.66
LRRC28-220ENST00000561253 OR3A3P47888 321 aa4.7□□□□□ -1.66
LRRC28-220ENST00000561253 GNG10P50151 68 aa4.7□□□□□ -1.66
LRRC28-220ENST00000561253 GNG2P59768 71 aa4.7□□□□□ -1.66
LRRC28-220ENST00000561253 UBA52P62987 128 aaKnown RBP4.7□□□□□ -1.66
LRRC28-220ENST00000561253 EBI3Q14213 229 aa4.7□□□□□ -1.66
LRRC28-220ENST00000561253 SSX2Q16385 188 aa4.7□□□□□ -1.66
LRRC28-220ENST00000561253 KRTAP21-3Q3LHN1 58 aa4.7□□□□□ -1.66
LRRC28-220ENST00000561253 PYHIN1Q6K0P9 492 aa4.7□□□□□ -1.66
LRRC28-220ENST00000561253 ZNF833PQ6ZTB9 187 aa4.7□□□□□ -1.66
LRRC28-220ENST00000561253 SNX29P2Q8IUI4 249 aa4.7□□□□□ -1.66
LRRC28-220ENST00000561253 Q8N6K4 173 aa4.7□□□□□ -1.66
LRRC28-220ENST00000561253 MAPKAPK5-AS1Q8N8E1 139 aa4.7□□□□□ -1.66
LRRC28-220ENST00000561253 RTN4IP1Q8WWV3 396 aaPredicted RBP4.7□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms