RNA–Protein interactions for RNA: ENST00000561206.1

USP8-216, Transcript of ubiquitin specific peptidase 8, humanhuman

TSL 2

Gene USP8, Length 556 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP8-216ENST00000561206 TMEM138Q9NPI0 162 aa1.12□□□□□ -2.23
USP8-216ENST00000561206 NRBP2Q9NSY0 501 aa1.12□□□□□ -2.23
USP8-216ENST00000561206 NLE1Q9NVX2 485 aaPredicted RBP1.12□□□□□ -2.23
USP8-216ENST00000561206 CCDC167Q9P0B6 97 aa1.12□□□□□ -2.23
USP8-216ENST00000561206 GNG8Q9UK08 70 aa1.12□□□□□ -2.23
USP8-216ENST00000561206 NDRG2Q9UN36 371 aaKnown RBP1.12□□□□□ -2.23
USP8-216ENST00000561206 BTRCQ9Y297 605 aa1.12□□□□□ -2.23
USP8-216ENST00000561206 RCL1Q9Y2P8 373 aaKnown RBP1.12□□□□□ -2.23
USP8-216ENST00000561206 FIS1Q9Y3D6 152 aa1.12□□□□□ -2.23
USP8-216ENST00000561206 V9GYH0 126 aa1.12□□□□□ -2.23
USP8-216ENST00000561206 DICER1Q9UPY3 1922 aaKnown RBP1.12□□□□□ -2.23
USP8-216ENST00000561206 KIF1AQ12756 1690 aa1.12□□□□□ -2.23
USP8-216ENST00000561206 TOPAZ1Q8N9V7 1692 aa1.12□□□□□ -2.23
USP8-216ENST00000561206 MAP2P11137 1827 aaKnown RBP1.12□□□□□ -2.23
USP8-216ENST00000561206 KIF13BQ9NQT8 1826 aa1.12□□□□□ -2.23
USP8-216ENST00000561206 SORL1Q92673 2214 aa1.12□□□□□ -2.23
USP8-216ENST00000561206 MYH9P35579 1960 aaKnown RBP1.12□□□□□ -2.23
USP8-216ENST00000561206 AKAP13Q12802 2813 aa1.11□□□□□ -2.23
USP8-216ENST00000561206 RGPD3A6NKT7 1758 aaPredicted RBP1.11□□□□□ -2.23
USP8-216ENST00000561206 RGPD4Q7Z3J3 1758 aa1.11□□□□□ -2.23
USP8-216ENST00000561206 SCN11AQ9UI33 1791 aa1.11□□□□□ -2.23
USP8-216ENST00000561206 PTPRFP10586 1907 aa1.11□□□□□ -2.23
USP8-216ENST00000561206 LOXHD1Q8IVV2 1947 aa1.11□□□□□ -2.23
USP8-216ENST00000561206 USP54Q70EL1 1684 aa1.11□□□□□ -2.23
USP8-216ENST00000561206 FXYD6-FXYD2A0A087WZ82 144 aa1.11□□□□□ -2.23
USP8-216ENST00000561206 A0A0A6YYH2 397 aa1.11□□□□□ -2.23
USP8-216ENST00000561206 IGHV1-69DA0A0B4J2H0 117 aa1.11□□□□□ -2.23
USP8-216ENST00000561206 A0A1W2PQL4 384 aaPredicted RBP1.11□□□□□ -2.23
USP8-216ENST00000561206 KANTRA0A1W2PQU2 76 aa1.11□□□□□ -2.23
USP8-216ENST00000561206 C20orf202A1L168 122 aa1.11□□□□□ -2.23
USP8-216ENST00000561206 TMEM218A2RU14 115 aa1.11□□□□□ -2.23
USP8-216ENST00000561206 A6NJ64 397 aa1.11□□□□□ -2.23
USP8-216ENST00000561206 SLC22A20A6NK97 555 aa1.11□□□□□ -2.23
USP8-216ENST00000561206 NCBP2LA6PVI3 153 aaKnown RBP1.11□□□□□ -2.23
USP8-216ENST00000561206 HMSDA8MTL9 139 aa1.11□□□□□ -2.23
USP8-216ENST00000561206 TMEM238C9JI98 176 aa1.11□□□□□ -2.23
USP8-216ENST00000561206 MCRIP1C9JLW8 97 aa1.11□□□□□ -2.23
USP8-216ENST00000561206 ZNF670-ZNF695F2Z2N8 137 aa1.11□□□□□ -2.23
USP8-216ENST00000561206 K7EN84 100 aa1.11□□□□□ -2.23
USP8-216ENST00000561206 APOC4-APOC2K7ER74 178 aa1.11□□□□□ -2.23
USP8-216ENST00000561206 GPR31O00270 319 aa1.11□□□□□ -2.23
USP8-216ENST00000561206 MFNGO00587 321 aa1.11□□□□□ -2.23
USP8-216ENST00000561206 PLA2G10O15496 165 aa1.11□□□□□ -2.23
USP8-216ENST00000561206 EEF1E1O43324 174 aaKnown RBP1.11□□□□□ -2.23
USP8-216ENST00000561206 TGOLN2O43493 480 aa1.11□□□□□ -2.23
USP8-216ENST00000561206 TCF21O43680 179 aa1.11□□□□□ -2.23
USP8-216ENST00000561206 SLC37A4O43826 429 aa1.11□□□□□ -2.23
USP8-216ENST00000561206 OR2T1O43869 369 aa1.11□□□□□ -2.23
USP8-216ENST00000561206 MPZL2O60487 215 aa1.11□□□□□ -2.23
USP8-216ENST00000561206 CTNSO60931 367 aa1.11□□□□□ -2.23
USP8-216ENST00000561206 CLDN11O75508 207 aa1.11□□□□□ -2.23
USP8-216ENST00000561206 CD160O95971 181 aa1.11□□□□□ -2.23
USP8-216ENST00000561206 APOC2P02655 101 aa1.11□□□□□ -2.23
USP8-216ENST00000561206 PMP2P02689 132 aa1.11□□□□□ -2.23
USP8-216ENST00000561206 MT-ND4LP03901 98 aa1.11□□□□□ -2.23
USP8-216ENST00000561206 RPN2P04844 631 aa1.11□□□□□ -2.23
USP8-216ENST00000561206 IFNA6P05013 189 aa1.11□□□□□ -2.23
USP8-216ENST00000561206 IGKV5-2P06315 115 aa1.11□□□□□ -2.23
USP8-216ENST00000561206 C8GP07360 202 aa1.11□□□□□ -2.23
USP8-216ENST00000561206 GIMD1P0DJR0 217 aa1.11□□□□□ -2.23
USP8-216ENST00000561206 SULT1A3P0DMM9 295 aa1.11□□□□□ -2.23
USP8-216ENST00000561206 SULT1A4P0DMN0 295 aa1.11□□□□□ -2.23
USP8-216ENST00000561206 CT45A6P0DMU7 189 aa1.11□□□□□ -2.23
USP8-216ENST00000561206 CT45A5P0DMU8 189 aa1.11□□□□□ -2.23
USP8-216ENST00000561206 CT45A7P0DMV0 189 aa1.11□□□□□ -2.23
USP8-216ENST00000561206 PRB4P10163 310 aaPredicted RBP1.11□□□□□ -2.23
USP8-216ENST00000561206 GABRA1P14867 456 aa1.11□□□□□ -2.23
USP8-216ENST00000561206 UGT2B7P16662 529 aa1.11□□□□□ -2.23
USP8-216ENST00000561206 NTF3P20783 257 aa1.11□□□□□ -2.23
USP8-216ENST00000561206 FGF7P21781 194 aa1.11□□□□□ -2.23
USP8-216ENST00000561206 NFYAP23511 347 aaPredicted RBP1.11□□□□□ -2.23
USP8-216ENST00000561206 KDELR1P24390 212 aa1.11□□□□□ -2.23
USP8-216ENST00000561206 HTR2CP28335 458 aa1.11□□□□□ -2.23
USP8-216ENST00000561206 TEAD1P28347 426 aa1.11□□□□□ -2.23
USP8-216ENST00000561206 HSD11B1P28845 292 aa1.11□□□□□ -2.23
USP8-216ENST00000561206 ADORA1P30542 326 aa1.11□□□□□ -2.23
USP8-216ENST00000561206 CD200P41217 278 aa1.11□□□□□ -2.23
USP8-216ENST00000561206 MAGEA12P43365 314 aa1.11□□□□□ -2.23
USP8-216ENST00000561206 CDC34P49427 236 aaPredicted RBP1.11□□□□□ -2.23
USP8-216ENST00000561206 HCCSP53701 268 aa1.11□□□□□ -2.23
USP8-216ENST00000561206 CTBP2P56545 445 aa1.11□□□□□ -2.23
USP8-216ENST00000561206 NDUFA6P56556 154 aa1.11□□□□□ -2.23
USP8-216ENST00000561206 CLDN6P56747 220 aa1.11□□□□□ -2.23
USP8-216ENST00000561206 AP3S2P59780 193 aa1.11□□□□□ -2.23
USP8-216ENST00000561206 DNAJB13P59910 316 aa1.11□□□□□ -2.23
USP8-216ENST00000561206 OR2B8PP59922 312 aa1.11□□□□□ -2.23
USP8-216ENST00000561206 RAB8AP61006 207 aa1.11□□□□□ -2.23
USP8-216ENST00000561206 SLC35B1P78383 322 aa1.11□□□□□ -2.23
USP8-216ENST00000561206 MRPS10P82664 201 aaKnown RBP1.11□□□□□ -2.23
USP8-216ENST00000561206 RPL19P84098 196 aaKnown RBP1.11□□□□□ -2.23
USP8-216ENST00000561206 EMX2Q04743 252 aa1.11□□□□□ -2.23
USP8-216ENST00000561206 SIGLEC14Q08ET2 396 aa1.11□□□□□ -2.23
USP8-216ENST00000561206 C1DQ13901 141 aaKnown RBP1.11□□□□□ -2.23
USP8-216ENST00000561206 RHEBQ15382 184 aa1.11□□□□□ -2.23
USP8-216ENST00000561206 SURF2Q15527 256 aaPredicted RBP1.11□□□□□ -2.23
USP8-216ENST00000561206 HMGN3Q15651 99 aa1.11□□□□□ -2.23
USP8-216ENST00000561206 ATP6V1FQ16864 119 aa1.11□□□□□ -2.23
USP8-216ENST00000561206 PGGHGQ32M88 737 aa1.11□□□□□ -2.23
USP8-216ENST00000561206 SPIN4Q56A73 249 aa1.11□□□□□ -2.23
USP8-216ENST00000561206 CT45A1Q5HYN5 189 aa1.11□□□□□ -2.23
Retrieved 100 of 20,778 RNA–protein pairs in 85.5 ms