RNA–Protein interactions for RNA: ENST00000561071.5

MARK3-223, Transcript of microtubule affinity regulating kinase 3, human

TSL 3

Gene MARK3, Length 746 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MARK3-223	ENST00000561071	UBE2E2	Q96LR5	201 aa		5.41	□□□□□ -1.54
MARK3-223	ENST00000561071	MS4A10	Q96PG2	267 aa		5.41	□□□□□ -1.54
MARK3-223	ENST00000561071	FAM103A1	Q9BTL3	118 aa	Known RBP	5.41	□□□□□ -1.54
MARK3-223	ENST00000561071	EXOSC5	Q9NQT4	235 aa	Known RBP eCLIP	5.41	□□□□□ -1.54
MARK3-223	ENST00000561071	C8orf4	Q9NR00	106 aa		5.41	□□□□□ -1.54
MARK3-223	ENST00000561071	PLEKHJ1	Q9NW61	149 aa		5.41	□□□□□ -1.54
MARK3-223	ENST00000561071	ABRACL	Q9P1F3	81 aa		5.41	□□□□□ -1.54
MARK3-223	ENST00000561071	GHRL	Q9UBU3	117 aa		5.41	□□□□□ -1.54
MARK3-223	ENST00000561071	AK3	Q9UIJ7	227 aa		5.41	□□□□□ -1.54
MARK3-223	ENST00000561071	VSIG4	Q9Y279	399 aa		5.41	□□□□□ -1.54
MARK3-223	ENST00000561071	AK6	Q9Y3D8	172 aa	Known RBP	5.41	□□□□□ -1.54
MARK3-223	ENST00000561071	DNAH7	Q8WXX0	4024 aa		5.4	□□□□□ -1.54
MARK3-223	ENST00000561071	HUWE1	Q7Z6Z7	4374 aa	Known RBP	5.4	□□□□□ -1.54
MARK3-223	ENST00000561071		A0A1W2PN81	502 aa		5.4	□□□□□ -1.54
MARK3-223	ENST00000561071		H0YJW9	148 aa		5.4	□□□□□ -1.54
MARK3-223	ENST00000561071		H7C2Y5	167 aa		5.4	□□□□□ -1.54
MARK3-223	ENST00000561071	RAB29	O14966	203 aa		5.4	□□□□□ -1.54
MARK3-223	ENST00000561071	IGHV3-11	P01762	117 aa		5.4	□□□□□ -1.54
MARK3-223	ENST00000561071	CD3G	P09693	182 aa		5.4	□□□□□ -1.54
MARK3-223	ENST00000561071	UCHL1	P09936	223 aa		5.4	□□□□□ -1.54
MARK3-223	ENST00000561071	HSMCR30	P0CW71	290 aa		5.4	□□□□□ -1.54
MARK3-223	ENST00000561071	OR5H8	P0DN80	308 aa		5.4	□□□□□ -1.54
MARK3-223	ENST00000561071	CD37	P11049	281 aa		5.4	□□□□□ -1.54
MARK3-223	ENST00000561071	CHRNA7	P36544	502 aa		5.4	□□□□□ -1.54
MARK3-223	ENST00000561071	CEACAM6	P40199	344 aa		5.4	□□□□□ -1.54
MARK3-223	ENST00000561071	MAP2K4	P45985	399 aa		5.4	□□□□□ -1.54
MARK3-223	ENST00000561071	TMEM50B	P56557	158 aa		5.4	□□□□□ -1.54
MARK3-223	ENST00000561071	RPS25	P62851	125 aa	Known RBP	5.4	□□□□□ -1.54
MARK3-223	ENST00000561071	CX3CL1	P78423	397 aa		5.4	□□□□□ -1.54
MARK3-223	ENST00000561071	ZNF616	Q08AN1	781 aa		5.4	□□□□□ -1.54
MARK3-223	ENST00000561071	PLGLA	Q15195	96 aa		5.4	□□□□□ -1.54
MARK3-223	ENST00000561071	LY6G6F	Q5SQ64	297 aa		5.4	□□□□□ -1.54
MARK3-223	ENST00000561071	RNLS	Q5VYX0	342 aa		5.4	□□□□□ -1.54
MARK3-223	ENST00000561071	ZNF880	Q6PDB4	577 aa		5.4	□□□□□ -1.54
MARK3-223	ENST00000561071	MS4A15	Q8N5U1	240 aa		5.4	□□□□□ -1.54
MARK3-223	ENST00000561071	MINDY2	Q8NBR6	621 aa		5.4	□□□□□ -1.54
MARK3-223	ENST00000561071	PHYHIP	Q92561	330 aa		5.4	□□□□□ -1.54
MARK3-223	ENST00000561071	DLX4	Q92988	240 aa	Predicted RBP	5.4	□□□□□ -1.54
MARK3-223	ENST00000561071	ARHGAP5-AS1	Q96IT6	56 aa		5.4	□□□□□ -1.54
MARK3-223	ENST00000561071	AGMAT	Q9BSE5	352 aa		5.4	□□□□□ -1.54
MARK3-223	ENST00000561071	MND1	Q9BWT6	205 aa		5.4	□□□□□ -1.54
MARK3-223	ENST00000561071	TM2D1	Q9BX74	207 aa		5.4	□□□□□ -1.54
MARK3-223	ENST00000561071	LPAR5	Q9H1C0	372 aa		5.4	□□□□□ -1.54
MARK3-223	ENST00000561071	PLGRKT	Q9HBL7	147 aa		5.4	□□□□□ -1.54
MARK3-223	ENST00000561071	ZMAT5	Q9UDW3	170 aa	Known RBP	5.4	□□□□□ -1.54
MARK3-223	ENST00000561071	ZNF256	Q9Y2P7	627 aa	Predicted RBP	5.4	□□□□□ -1.54
MARK3-223	ENST00000561071	LRRC42	Q9Y546	428 aa		5.4	□□□□□ -1.54
MARK3-223	ENST00000561071		U3KQK5	164 aa		5.4	□□□□□ -1.54
MARK3-223	ENST00000561071	SORL1	Q92673	2214 aa		5.4	□□□□□ -1.55
MARK3-223	ENST00000561071		A0A087WW49	117 aa		5.39	□□□□□ -1.55
MARK3-223	ENST00000561071	IGKV1-6	A0A0C4DH72	117 aa		5.39	□□□□□ -1.55
MARK3-223	ENST00000561071		A0A1W2PS18	150 aa		5.39	□□□□□ -1.55
MARK3-223	ENST00000561071	FOXI3	A8MTJ6	420 aa	Predicted RBP	5.39	□□□□□ -1.55
MARK3-223	ENST00000561071	OVOL1	O14753	267 aa		5.39	□□□□□ -1.55
MARK3-223	ENST00000561071	NDUFA3	O95167	84 aa		5.39	□□□□□ -1.55
MARK3-223	ENST00000561071	IGKV1-16	P04430	117 aa		5.39	□□□□□ -1.55
MARK3-223	ENST00000561071	OR8U8	P0C7N1	319 aa		5.39	□□□□□ -1.55
MARK3-223	ENST00000561071	SPN	P16150	400 aa		5.39	□□□□□ -1.55
MARK3-223	ENST00000561071	VEGFC	P49767	419 aa		5.39	□□□□□ -1.55
MARK3-223	ENST00000561071	AQP4	P55087	323 aa		5.39	□□□□□ -1.55
MARK3-223	ENST00000561071	RUNX1	Q01196	453 aa		5.39	□□□□□ -1.55
MARK3-223	ENST00000561071	PSG5	Q15238	335 aa		5.39	□□□□□ -1.55
MARK3-223	ENST00000561071	RAB11B	Q15907	218 aa		5.39	□□□□□ -1.55
MARK3-223	ENST00000561071	ZNF660	Q6AZW8	331 aa	Predicted RBP	5.39	□□□□□ -1.55
MARK3-223	ENST00000561071	SMIM29	Q86T20	159 aa		5.39	□□□□□ -1.55
MARK3-223	ENST00000561071	PPP1R27	Q86WC6	154 aa		5.39	□□□□□ -1.55
MARK3-223	ENST00000561071	ZNF383	Q8NA42	475 aa		5.39	□□□□□ -1.55
MARK3-223	ENST00000561071	OR6M1	Q8NGM8	313 aa		5.39	□□□□□ -1.55
MARK3-223	ENST00000561071	ARPC1A	Q92747	370 aa		5.39	□□□□□ -1.55
MARK3-223	ENST00000561071	THRSP	Q92748	146 aa		5.39	□□□□□ -1.55
MARK3-223	ENST00000561071	UFD1	Q92890	307 aa		5.39	□□□□□ -1.55
MARK3-223	ENST00000561071	PECR	Q9BY49	303 aa		5.39	□□□□□ -1.55
MARK3-223	ENST00000561071	KRTAP1-5	Q9BYS1	174 aa		5.39	□□□□□ -1.55
MARK3-223	ENST00000561071	CCDC90B	Q9GZT6	254 aa		5.39	□□□□□ -1.55
MARK3-223	ENST00000561071		Q9N2K0	584 aa		5.39	□□□□□ -1.55
MARK3-223	ENST00000561071	ISYNA1	Q9NPH2	558 aa		5.39	□□□□□ -1.55
MARK3-223	ENST00000561071	SCN3B	Q9NY72	215 aa		5.39	□□□□□ -1.55
MARK3-223	ENST00000561071	PIPOX	Q9P0Z9	390 aa		5.39	□□□□□ -1.55
MARK3-223	ENST00000561071	METTL1	Q9UBP6	276 aa	Known RBP	5.39	□□□□□ -1.55
MARK3-223	ENST00000561071	FOXA2	Q9Y261	457 aa	Predicted RBP	5.39	□□□□□ -1.55
MARK3-223	ENST00000561071	NUBP2	Q9Y5Y2	271 aa		5.39	□□□□□ -1.55
MARK3-223	ENST00000561071	TRBV6-6	A0A0A6YYG2	114 aa		5.38	□□□□□ -1.55
MARK3-223	ENST00000561071	LINC01619	G3V211	115 aa		5.38	□□□□□ -1.55
MARK3-223	ENST00000561071	SLC17A2	O00624	439 aa		5.38	□□□□□ -1.55
MARK3-223	ENST00000561071	ARPC1B	O15143	372 aa	Known RBP	5.38	□□□□□ -1.55
MARK3-223	ENST00000561071	SAP30	O75446	220 aa		5.38	□□□□□ -1.55
MARK3-223	ENST00000561071	CA2	P00918	260 aa		5.38	□□□□□ -1.55
MARK3-223	ENST00000561071	ZBTB25	P24278	435 aa		5.38	□□□□□ -1.55
MARK3-223	ENST00000561071	CALR	P27797	417 aa	Known RBP	5.38	□□□□□ -1.55
MARK3-223	ENST00000561071	MC5R	P33032	325 aa		5.38	□□□□□ -1.55
MARK3-223	ENST00000561071	HLA-DRB3	P79483	266 aa		5.38	□□□□□ -1.55
MARK3-223	ENST00000561071	RPL24	P83731	157 aa	Known RBP	5.38	□□□□□ -1.55
MARK3-223	ENST00000561071	FABP5	Q01469	135 aa		5.38	□□□□□ -1.55
MARK3-223	ENST00000561071	DEFA5	Q01523	94 aa		5.38	□□□□□ -1.55
MARK3-223	ENST00000561071	PJVK	Q0ZLH3	352 aa		5.38	□□□□□ -1.55
MARK3-223	ENST00000561071	TPBG	Q13641	420 aa		5.38	□□□□□ -1.55
MARK3-223	ENST00000561071	C2orf76	Q3KRA6	126 aa		5.38	□□□□□ -1.55
MARK3-223	ENST00000561071	MOGAT2	Q3SYC2	334 aa		5.38	□□□□□ -1.55
MARK3-223	ENST00000561071	ACTBL2	Q562R1	376 aa		5.38	□□□□□ -1.55
MARK3-223	ENST00000561071	IGSF11	Q5DX21	431 aa		5.38	□□□□□ -1.55

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