RNA–Protein interactions for RNA: ENST00000560858.1

SPG11-223, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 5

Gene SPG11, Length 447 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-223ENST00000560858 WDR86Q86TI4 376 aa2.03□□□□□ -2.08
SPG11-223ENST00000560858 MRPL52Q86TS9 123 aaKnown RBP2.03□□□□□ -2.08
SPG11-223ENST00000560858 YRDCQ86U90 279 aaKnown RBP2.03□□□□□ -2.08
SPG11-223ENST00000560858 ZNF573Q86YE8 665 aa2.03□□□□□ -2.08
SPG11-223ENST00000560858 TDHQ8IZJ6 230 aa2.03□□□□□ -2.08
SPG11-223ENST00000560858 FAM58AQ8N1B3 248 aa2.03□□□□□ -2.08
SPG11-223ENST00000560858 RPP25LQ8N5L8 163 aaKnown RBP2.03□□□□□ -2.08
SPG11-223ENST00000560858 DRAM1Q8N682 238 aa2.03□□□□□ -2.08
SPG11-223ENST00000560858 TMEM217Q8N7C4 229 aa2.03□□□□□ -2.08
SPG11-223ENST00000560858 Q8N7P7 452 aa2.03□□□□□ -2.08
SPG11-223ENST00000560858 ZBTB34Q8NCN2 500 aa2.03□□□□□ -2.08
SPG11-223ENST00000560858 NAXEQ8NCW5 288 aa2.03□□□□□ -2.08
SPG11-223ENST00000560858 OR2M7Q8NG81 312 aa2.03□□□□□ -2.08
SPG11-223ENST00000560858 OR10A7Q8NGE5 316 aa2.03□□□□□ -2.08
SPG11-223ENST00000560858 OR51G1Q8NGK1 321 aa2.03□□□□□ -2.08
SPG11-223ENST00000560858 OR1P1Q8NH06 330 aa2.03□□□□□ -2.08
SPG11-223ENST00000560858 OR4X1Q8NH49 305 aa2.03□□□□□ -2.08
SPG11-223ENST00000560858 OR51H1Q8NH63 302 aa2.03□□□□□ -2.08
SPG11-223ENST00000560858 OR10J5Q8NHC4 309 aa2.03□□□□□ -2.08
SPG11-223ENST00000560858 SCGB1C1Q8TD33 95 aa2.03□□□□□ -2.08
SPG11-223ENST00000560858 NEK7Q8TDX7 302 aa2.03□□□□□ -2.08
SPG11-223ENST00000560858 FAM216AQ8WUB2 273 aa2.03□□□□□ -2.08
SPG11-223ENST00000560858 PSMF1Q92530 271 aa2.03□□□□□ -2.08
SPG11-223ENST00000560858 RAB1CQ92928 201 aa2.03□□□□□ -2.08
SPG11-223ENST00000560858 LHX4Q969G2 390 aa2.03□□□□□ -2.08
SPG11-223ENST00000560858 C5orf30Q96GV9 206 aa2.03□□□□□ -2.08
SPG11-223ENST00000560858 ACY3Q96HD9 319 aa2.03□□□□□ -2.08
SPG11-223ENST00000560858 SNX22Q96L94 193 aa2.03□□□□□ -2.08
SPG11-223ENST00000560858 PACRGQ96M98 296 aaPredicted RBP2.03□□□□□ -2.08
SPG11-223ENST00000560858 JSRP1Q96MG2 331 aaPredicted RBP2.03□□□□□ -2.08
SPG11-223ENST00000560858 OR4C12Q96R67 309 aa2.03□□□□□ -2.08
SPG11-223ENST00000560858 SMIM7Q9BQ49 75 aa2.03□□□□□ -2.08
SPG11-223ENST00000560858 FAM173AQ9BQD7 235 aa2.03□□□□□ -2.08
SPG11-223ENST00000560858 C2orf88Q9BSF0 95 aa2.03□□□□□ -2.08
SPG11-223ENST00000560858 NDUFAF3Q9BU61 184 aa2.03□□□□□ -2.08
SPG11-223ENST00000560858 GPR61Q9BZJ8 451 aa2.03□□□□□ -2.08
SPG11-223ENST00000560858 PARLQ9H300 379 aa2.03□□□□□ -2.08
SPG11-223ENST00000560858 OR51I2Q9H344 312 aa2.03□□□□□ -2.08
SPG11-223ENST00000560858 RBKSQ9H477 322 aa2.03□□□□□ -2.08
SPG11-223ENST00000560858 VSIRQ9H7M9 311 aa2.03□□□□□ -2.08
SPG11-223ENST00000560858 SLC25A22Q9H936 323 aa2.03□□□□□ -2.08
SPG11-223ENST00000560858 MAP6D1Q9H9H5 199 aa2.03□□□□□ -2.08
SPG11-223ENST00000560858 SAP30LQ9HAJ7 183 aa2.03□□□□□ -2.08
SPG11-223ENST00000560858 HES4Q9HCC6 221 aa2.03□□□□□ -2.08
SPG11-223ENST00000560858 PSENENQ9NZ42 101 aa2.03□□□□□ -2.08
SPG11-223ENST00000560858 KCNIP1Q9NZI2 227 aa2.03□□□□□ -2.08
SPG11-223ENST00000560858 OR1A1Q9P1Q5 309 aa2.03□□□□□ -2.08
SPG11-223ENST00000560858 PILRBQ9UKJ0 227 aa2.03□□□□□ -2.08
SPG11-223ENST00000560858 TP53TG5Q9Y2B4 290 aa2.03□□□□□ -2.08
SPG11-223ENST00000560858 POLDIP2Q9Y2S7 368 aa2.03□□□□□ -2.08
SPG11-223ENST00000560858 WIPI2Q9Y4P8 454 aa2.03□□□□□ -2.08
SPG11-223ENST00000560858 URGCP-MRPS24S4R325 110 aa2.03□□□□□ -2.08
SPG11-223ENST00000560858 CEP290O15078 2479 aa2.03□□□□□ -2.08
SPG11-223ENST00000560858 CNTRLQ7Z7A1 2325 aa2.03□□□□□ -2.08
SPG11-223ENST00000560858 UNC80Q8N2C7 3258 aa2.03□□□□□ -2.08
SPG11-223ENST00000560858 MED13Q9UHV7 2174 aa2.03□□□□□ -2.08
SPG11-223ENST00000560858 LAMA3Q16787 3333 aa2.02□□□□□ -2.09
SPG11-223ENST00000560858 DSCAMO60469 2012 aa2.02□□□□□ -2.09
SPG11-223ENST00000560858 TRAV9-1A0A075B6T8 112 aa2.02□□□□□ -2.09
SPG11-223ENST00000560858 A0A087X0M5 115 aa2.02□□□□□ -2.09
SPG11-223ENST00000560858 A0A1B0GWJ7 208 aa2.02□□□□□ -2.09
SPG11-223ENST00000560858 A0A1B0GX30 115 aa2.02□□□□□ -2.09
SPG11-223ENST00000560858 ODAMA1E959 279 aa2.02□□□□□ -2.09
SPG11-223ENST00000560858 C5orf49A4QMS7 147 aa2.02□□□□□ -2.09
SPG11-223ENST00000560858 ARGFXA6NJG6 315 aa2.02□□□□□ -2.09
SPG11-223ENST00000560858 TMEM210A6NLX4 147 aa2.02□□□□□ -2.09
SPG11-223ENST00000560858 LRRC30A6NM36 301 aa2.02□□□□□ -2.09
SPG11-223ENST00000560858 FAM90A9PA6NNJ1 464 aa2.02□□□□□ -2.09
SPG11-223ENST00000560858 ANKRD30BLA7E2S9 258 aa2.02□□□□□ -2.09
SPG11-223ENST00000560858 C15orf62A8K5M9 175 aa2.02□□□□□ -2.09
SPG11-223ENST00000560858 A8MWP6 167 aa2.02□□□□□ -2.09
SPG11-223ENST00000560858 IQCF6A8MYZ5 107 aa2.02□□□□□ -2.09
SPG11-223ENST00000560858 PRSS46E5RG02 174 aa2.02□□□□□ -2.09
SPG11-223ENST00000560858 PPP5D1E7EU14 171 aa2.02□□□□□ -2.09
SPG11-223ENST00000560858 H7BYZ3 331 aa2.02□□□□□ -2.09
SPG11-223ENST00000560858 HSPB6O14558 160 aa2.02□□□□□ -2.09
SPG11-223ENST00000560858 RAB29O14966 203 aa2.02□□□□□ -2.09
SPG11-223ENST00000560858 SLC31A2O15432 143 aa2.02□□□□□ -2.09
SPG11-223ENST00000560858 TNFSF12O43508 249 aa2.02□□□□□ -2.09
SPG11-223ENST00000560858 SMPD2O60906 423 aa2.02□□□□□ -2.09
SPG11-223ENST00000560858 ZNF737O75373 536 aa2.02□□□□□ -2.09
SPG11-223ENST00000560858 MRPL33O75394 65 aaKnown RBP2.02□□□□□ -2.09
SPG11-223ENST00000560858 RHBDL1O75783 438 aa2.02□□□□□ -2.09
SPG11-223ENST00000560858 NEURL1O76050 574 aa2.02□□□□□ -2.09
SPG11-223ENST00000560858 SYNGR4O95473 234 aa2.02□□□□□ -2.09
SPG11-223ENST00000560858 CLDN14O95500 239 aa2.02□□□□□ -2.09
SPG11-223ENST00000560858 CER1O95813 267 aa2.02□□□□□ -2.09
SPG11-223ENST00000560858 OR2H2O95918 312 aa2.02□□□□□ -2.09
SPG11-223ENST00000560858 NGFP01138 241 aa2.02□□□□□ -2.09
SPG11-223ENST00000560858 GCGP01275 180 aa2.02□□□□□ -2.09
SPG11-223ENST00000560858 MBP02144 154 aa2.02□□□□□ -2.09
SPG11-223ENST00000560858 GYPAP02724 150 aa2.02□□□□□ -2.09
SPG11-223ENST00000560858 CD55P08174 381 aa2.02□□□□□ -2.09
SPG11-223ENST00000560858 RD3LP0DJH9 198 aa2.02□□□□□ -2.09
SPG11-223ENST00000560858 GZMBP10144 247 aa2.02□□□□□ -2.09
SPG11-223ENST00000560858 CCL4P13236 92 aa2.02□□□□□ -2.09
SPG11-223ENST00000560858 FABP4P15090 132 aa2.02□□□□□ -2.09
SPG11-223ENST00000560858 GZMHP20718 246 aa2.02□□□□□ -2.09
SPG11-223ENST00000560858 GALR1P47211 349 aa2.02□□□□□ -2.09
SPG11-223ENST00000560858 CDC34P49427 236 aaPredicted RBP2.02□□□□□ -2.09
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms