RNA–Protein interactions for RNA: ENST00000560540.5

SHF-207, Transcript of Src homology 2 domain containing F, humanhuman

TSL 5 BASIC

Gene SHF, Length 2,062 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHF-207ENST00000560540 A0A1W2PPV4 95 aa20.4■□□□□ 0.86
SHF-207ENST00000560540 SPINT2O43291 252 aa20.4■□□□□ 0.86
SHF-207ENST00000560540 LYZL6O75951 148 aa20.4■□□□□ 0.86
SHF-207ENST00000560540 UCNP55089 124 aa20.4■□□□□ 0.86
SHF-207ENST00000560540 FOXF2Q12947 444 aa20.4■□□□□ 0.86
SHF-207ENST00000560540 RBMXL3Q8N7X1 1067 aaKnown RBP20.4■□□□□ 0.86
SHF-207ENST00000560540 TPRP12270 2363 aaKnown RBP20.4■□□□□ 0.86
SHF-207ENST00000560540 TRAV38-1A0A0B4J264 116 aa20.39■□□□□ 0.86
SHF-207ENST00000560540 C15orf65H3BRN8 121 aa20.39■□□□□ 0.86
SHF-207ENST00000560540 CRYAAP02489 173 aa20.39■□□□□ 0.86
SHF-207ENST00000560540 SPCS3P61009 180 aa20.39■□□□□ 0.86
SHF-207ENST00000560540 PDLIM3Q53GG5 364 aaPredicted RBP20.39■□□□□ 0.86
SHF-207ENST00000560540 OR52E5Q8NH55 327 aa20.39■□□□□ 0.86
SHF-207ENST00000560540 TP53TG5Q9Y2B4 290 aa20.39■□□□□ 0.86
SHF-207ENST00000560540 IGHV3-43A0A0B4J1X8 118 aa20.39■□□□□ 0.85
SHF-207ENST00000560540 ZNF705GA8MUZ8 300 aaPredicted RBP20.39■□□□□ 0.85
SHF-207ENST00000560540 HPRT1P00492 218 aa20.39■□□□□ 0.85
SHF-207ENST00000560540 IGHV3-43DP0DP04 118 aa20.39■□□□□ 0.85
SHF-207ENST00000560540 DUTP33316 252 aaKnown RBP20.39■□□□□ 0.85
SHF-207ENST00000560540 IQCJQ1A5X6 159 aa20.39■□□□□ 0.85
SHF-207ENST00000560540 CST9LP1Q5W188 147 aa20.39■□□□□ 0.85
SHF-207ENST00000560540 Q6ZT83 130 aa20.39■□□□□ 0.85
SHF-207ENST00000560540 TUBG2Q9NRH3 451 aa20.39■□□□□ 0.85
SHF-207ENST00000560540 CLCF1Q9UBD9 225 aa20.39■□□□□ 0.85
SHF-207ENST00000560540 NDUFB4O95168 129 aa20.38■□□□□ 0.85
SHF-207ENST00000560540 GCSAMLQ5JQS6 135 aa20.38■□□□□ 0.85
SHF-207ENST00000560540 PRAMEF6Q5VXH4 476 aa20.38■□□□□ 0.85
SHF-207ENST00000560540 OR5T1Q8NG75 326 aa20.38■□□□□ 0.85
SHF-207ENST00000560540 PXMP4Q9Y6I8 212 aa20.38■□□□□ 0.85
SHF-207ENST00000560540 IGKV3-15P01624 115 aa20.38■□□□□ 0.85
SHF-207ENST00000560540 KITLGP21583 273 aa20.38■□□□□ 0.85
SHF-207ENST00000560540 EDDM3BP56851 147 aa20.38■□□□□ 0.85
SHF-207ENST00000560540 LINC00205P59089 165 aa20.38■□□□□ 0.85
SHF-207ENST00000560540 UBE2G2P60604 165 aa20.38■□□□□ 0.85
SHF-207ENST00000560540 Q6ZS92 163 aa20.38■□□□□ 0.85
SHF-207ENST00000560540 MRPL41Q8IXM3 137 aaKnown RBP20.38■□□□□ 0.85
SHF-207ENST00000560540 METRNQ9UJH8 293 aa20.38■□□□□ 0.85
SHF-207ENST00000560540 TRAPPC1Q9Y5R8 145 aa20.38■□□□□ 0.85
SHF-207ENST00000560540 GPR12P47775 334 aa20.37■□□□□ 0.85
SHF-207ENST00000560540 PRAMEF5Q5TYX0 476 aa20.37■□□□□ 0.85
SHF-207ENST00000560540 SFRP2Q96HF1 295 aa20.37■□□□□ 0.85
SHF-207ENST00000560540 A0A0U1RQK1 487 aa20.36■□□□□ 0.85
SHF-207ENST00000560540 ZNF320A2RRD8 509 aa20.36■□□□□ 0.85
SHF-207ENST00000560540 PRSS46E5RG02 174 aa20.36■□□□□ 0.85
SHF-207ENST00000560540 RBFOX2O43251 390 aaKnown RBP eCLIP20.36■□□□□ 0.85
SHF-207ENST00000560540 STAG3L2P0CL84 134 aa20.36■□□□□ 0.85
SHF-207ENST00000560540 STAG3L3P0CL85 134 aa20.36■□□□□ 0.85
SHF-207ENST00000560540 EGR1P18146 543 aa20.36■□□□□ 0.85
SHF-207ENST00000560540 TREML4Q6UXN2 200 aa20.36■□□□□ 0.85
SHF-207ENST00000560540 TPRX1Q8N7U7 411 aa20.36■□□□□ 0.85
SHF-207ENST00000560540 DERL1Q9BUN8 251 aa20.36■□□□□ 0.85
SHF-207ENST00000560540 HCFC1P51610 2035 aa20.36■□□□□ 0.85
SHF-207ENST00000560540 TLN1Q9Y490 2541 aaKnown RBP20.36■□□□□ 0.85
SHF-207ENST00000560540 MDFIC2A0A1B0GVS7 189 aa20.36■□□□□ 0.85
SHF-207ENST00000560540 TFF1P04155 84 aa20.36■□□□□ 0.85
SHF-207ENST00000560540 FAM87AP0C7U9 286 aa20.36■□□□□ 0.85
SHF-207ENST00000560540 RNF224P0DH78 156 aa20.36■□□□□ 0.85
SHF-207ENST00000560540 HOXA4Q00056 320 aaPredicted RBP20.36■□□□□ 0.85
SHF-207ENST00000560540 SSX2Q16385 188 aa20.36■□□□□ 0.85
SHF-207ENST00000560540 ZNF71Q9NQZ8 489 aaPredicted RBP20.36■□□□□ 0.85
SHF-207ENST00000560540 JPT1Q9UK76 154 aa20.36■□□□□ 0.85
SHF-207ENST00000560540 ACACBO00763 2458 aa20.35■□□□□ 0.85
SHF-207ENST00000560540 TIMM8AO60220 97 aaPredicted RBP20.35■□□□□ 0.85
SHF-207ENST00000560540 CXorf1O96002 111 aa20.35■□□□□ 0.85
SHF-207ENST00000560540 VDAC2P45880 294 aaPredicted RBP20.35■□□□□ 0.85
SHF-207ENST00000560540 PRSS8Q16651 343 aa20.35■□□□□ 0.85
SHF-207ENST00000560540 FAM214BQ7L5A3 538 aa20.35■□□□□ 0.85
SHF-207ENST00000560540 OR4A16Q8NH70 328 aa20.35■□□□□ 0.85
SHF-207ENST00000560540 RFESDQ8TAC1 157 aa20.35■□□□□ 0.85
SHF-207ENST00000560540 GGTLC1Q9BX51 225 aa20.35■□□□□ 0.85
SHF-207ENST00000560540 ELOVL5Q9NYP7 299 aa20.35■□□□□ 0.85
SHF-207ENST00000560540 DEFB108AA8MXU0 73 aa20.34■□□□□ 0.85
SHF-207ENST00000560540 FCGR3BO75015 233 aa20.34■□□□□ 0.85
SHF-207ENST00000560540 ARL14EPLP0DKL9 152 aa20.34■□□□□ 0.85
SHF-207ENST00000560540 GUSBP1Q15486 140 aa20.34■□□□□ 0.85
SHF-207ENST00000560540 MISP3Q96FF7 219 aa20.34■□□□□ 0.85
SHF-207ENST00000560540 NDUFB7P17568 137 aa20.34■□□□□ 0.85
SHF-207ENST00000560540 HOXC12P31275 282 aa20.34■□□□□ 0.85
SHF-207ENST00000560540 ZNF114Q8NC26 417 aa20.34■□□□□ 0.85
SHF-207ENST00000560540 C1orf162Q8NEQ5 155 aaPredicted RBP20.34■□□□□ 0.85
SHF-207ENST00000560540 MGST2Q99735 147 aa20.34■□□□□ 0.85
SHF-207ENST00000560540 PROP1O75360 226 aa20.33■□□□□ 0.85
SHF-207ENST00000560540 GCNT2Q8N0V5 402 aa20.33■□□□□ 0.85
SHF-207ENST00000560540 PATZ1Q9HBE1 687 aaKnown RBP20.33■□□□□ 0.85
SHF-207ENST00000560540 HEYLQ9NQ87 328 aaPredicted RBP20.33■□□□□ 0.85
SHF-207ENST00000560540 ITPR1Q14643 2758 aa20.33■□□□□ 0.84
SHF-207ENST00000560540 A0A1B0GWJ7 208 aa20.33■□□□□ 0.84
SHF-207ENST00000560540 YPEL3P61236 119 aaPredicted RBP20.33■□□□□ 0.84
SHF-207ENST00000560540 ERVK-16P61578 105 aa20.33■□□□□ 0.84
SHF-207ENST00000560540 CD177Q8N6Q3 437 aa20.33■□□□□ 0.84
SHF-207ENST00000560540 SGMS2Q8NHU3 365 aa20.33■□□□□ 0.84
SHF-207ENST00000560540 Q8TCH9 128 aa20.33■□□□□ 0.84
SHF-207ENST00000560540 NBEAQ8NFP9 2946 aa20.32■□□□□ 0.84
SHF-207ENST00000560540 TRBV20OR9-2A0A075B6H5 130 aa20.32■□□□□ 0.84
SHF-207ENST00000560540 TRAV9-1A0A075B6T8 112 aa20.32■□□□□ 0.84
SHF-207ENST00000560540 RRHO14718 337 aa20.32■□□□□ 0.84
SHF-207ENST00000560540 YPEL1O60688 119 aa20.32■□□□□ 0.84
SHF-207ENST00000560540 BMP5P22003 454 aa20.32■□□□□ 0.84
SHF-207ENST00000560540 FAM90A1Q86YD7 464 aa20.32■□□□□ 0.84
SHF-207ENST00000560540 YPEL2Q96QA6 119 aa20.32■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms