RNA–Protein interactions for RNA: ENST00000560448.5

PKNOX1-209, Transcript of PBX/knotted 1 homeobox 1, humanhuman

TSL 5

Gene PKNOX1, Length 1,429 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKNOX1-209ENST00000560448 LIN54Q6MZP7 749 aa11.09□□□□□ -0.63
PKNOX1-209ENST00000560448 KCTD9Q7L273 389 aa11.09□□□□□ -0.63
PKNOX1-209ENST00000560448 SLC35E3Q7Z769 313 aa11.09□□□□□ -0.63
PKNOX1-209ENST00000560448 CMTM1Q8IZ96 169 aa11.09□□□□□ -0.63
PKNOX1-209ENST00000560448 SGMS2Q8NHU3 365 aa11.09□□□□□ -0.63
PKNOX1-209ENST00000560448 GRPEL2Q8TAA5 225 aa11.09□□□□□ -0.63
PKNOX1-209ENST00000560448 CASTOR1Q8WTX7 329 aa11.09□□□□□ -0.63
PKNOX1-209ENST00000560448 AIFM2Q9BRQ8 373 aa11.09□□□□□ -0.63
PKNOX1-209ENST00000560448 RSRP1Q9BUV0 290 aa11.09□□□□□ -0.63
PKNOX1-209ENST00000560448 SLC5A7Q9GZV3 580 aa11.09□□□□□ -0.63
PKNOX1-209ENST00000560448 SLA2Q9H6Q3 261 aa11.09□□□□□ -0.63
PKNOX1-209ENST00000560448 HSPB11Q9Y547 144 aa11.09□□□□□ -0.63
PKNOX1-209ENST00000560448 IGKV1D-13A0A0B4J2D9 117 aa11.09□□□□□ -0.63
PKNOX1-209ENST00000560448 CRYM-AS1A6NIL9 109 aa11.09□□□□□ -0.63
PKNOX1-209ENST00000560448 RRHO14718 337 aa11.09□□□□□ -0.63
PKNOX1-209ENST00000560448 IGLV2-14P01704 120 aa11.09□□□□□ -0.63
PKNOX1-209ENST00000560448 IGKV1-13P0DP09 117 aa11.09□□□□□ -0.63
PKNOX1-209ENST00000560448 F2RL1P55085 397 aa11.09□□□□□ -0.63
PKNOX1-209ENST00000560448 TMEM177Q53S58 311 aa11.09□□□□□ -0.63
PKNOX1-209ENST00000560448 COMMD1Q8N668 190 aa11.09□□□□□ -0.63
PKNOX1-209ENST00000560448 KLHDC1Q8N7A1 406 aa11.09□□□□□ -0.63
PKNOX1-209ENST00000560448 TCTEX1D1Q8N7M0 179 aa11.09□□□□□ -0.63
PKNOX1-209ENST00000560448 BVESQ8NE79 360 aa11.09□□□□□ -0.63
PKNOX1-209ENST00000560448 CD300LFQ8TDQ1 290 aa11.09□□□□□ -0.63
PKNOX1-209ENST00000560448 SECTM1Q8WVN6 248 aa11.09□□□□□ -0.63
PKNOX1-209ENST00000560448 TAF15Q92804 592 aaKnown RBP eCLIP11.09□□□□□ -0.63
PKNOX1-209ENST00000560448 TRAV14DV4A0A0A6YYC5 116 aa11.08□□□□□ -0.64
PKNOX1-209ENST00000560448 HMSDA8MTL9 139 aa11.08□□□□□ -0.64
PKNOX1-209ENST00000560448 HAX1O00165 279 aa11.08□□□□□ -0.64
PKNOX1-209ENST00000560448 CCSO14618 274 aa11.08□□□□□ -0.64
PKNOX1-209ENST00000560448 RBFOX2O43251 390 aaKnown RBP eCLIP11.08□□□□□ -0.64
PKNOX1-209ENST00000560448 IGKV1-16P04430 117 aa11.08□□□□□ -0.64
PKNOX1-209ENST00000560448 IGF1P05019 195 aa11.08□□□□□ -0.64
PKNOX1-209ENST00000560448 RPS16P62249 146 aaKnown RBP11.08□□□□□ -0.64
PKNOX1-209ENST00000560448 SLC35B1P78383 322 aa11.08□□□□□ -0.64
PKNOX1-209ENST00000560448 EIF4EBP1Q13541 118 aaPredicted RBP11.08□□□□□ -0.64
PKNOX1-209ENST00000560448 SLC38A6Q8IZM9 456 aa11.08□□□□□ -0.64
PKNOX1-209ENST00000560448 OR4S2Q8NH73 311 aa11.08□□□□□ -0.64
PKNOX1-209ENST00000560448 WIPF2Q8TF74 440 aaPredicted RBP11.08□□□□□ -0.64
PKNOX1-209ENST00000560448 HARBI1Q96MB7 349 aa11.08□□□□□ -0.64
PKNOX1-209ENST00000560448 PAIP2BQ9ULR5 123 aaKnown RBP11.08□□□□□ -0.64
PKNOX1-209ENST00000560448 LINC00473A8K010 186 aa11.07□□□□□ -0.64
PKNOX1-209ENST00000560448 SHOXO15266 292 aa11.07□□□□□ -0.64
PKNOX1-209ENST00000560448 FXYD4P59646 89 aa11.07□□□□□ -0.64
PKNOX1-209ENST00000560448 C9orf152Q5JTZ5 239 aa11.07□□□□□ -0.64
PKNOX1-209ENST00000560448 OR4X2Q8NGF9 303 aa11.07□□□□□ -0.64
PKNOX1-209ENST00000560448 COQ8AQ8NI60 647 aa11.07□□□□□ -0.64
PKNOX1-209ENST00000560448 VSTM2AQ8TAG5 236 aa11.07□□□□□ -0.64
PKNOX1-209ENST00000560448 GALNT14Q96FL9 552 aa11.07□□□□□ -0.64
PKNOX1-209ENST00000560448 C5orf30Q96GV9 206 aa11.07□□□□□ -0.64
PKNOX1-209ENST00000560448 FAM212BQ9NTI7 297 aaPredicted RBP11.07□□□□□ -0.64
PKNOX1-209ENST00000560448 PRR13Q9NZ81 148 aa11.07□□□□□ -0.64
PKNOX1-209ENST00000560448 SIGLEC9Q9Y336 463 aa11.07□□□□□ -0.64
PKNOX1-209ENST00000560448 GPR31O00270 319 aa11.06□□□□□ -0.64
PKNOX1-209ENST00000560448 SNAPC5O75971 98 aa11.06□□□□□ -0.64
PKNOX1-209ENST00000560448 CXCL2P19875 107 aa11.06□□□□□ -0.64
PKNOX1-209ENST00000560448 GNRHRP30968 328 aa11.06□□□□□ -0.64
PKNOX1-209ENST00000560448 PIGPP57054 158 aa11.06□□□□□ -0.64
PKNOX1-209ENST00000560448 PLGLAQ15195 96 aa11.06□□□□□ -0.64
PKNOX1-209ENST00000560448 PSG5Q15238 335 aa11.06□□□□□ -0.64
PKNOX1-209ENST00000560448 VMA21Q3ZAQ7 101 aa11.06□□□□□ -0.64
PKNOX1-209ENST00000560448 ZNF562Q6V9R5 426 aa11.06□□□□□ -0.64
PKNOX1-209ENST00000560448 Q6ZS46 218 aa11.06□□□□□ -0.64
PKNOX1-209ENST00000560448 CENPVQ7Z7K6 275 aaPredicted RBP11.06□□□□□ -0.64
PKNOX1-209ENST00000560448 SGPP2Q8IWX5 399 aa11.06□□□□□ -0.64
PKNOX1-209ENST00000560448 TEX45Q8NA69 505 aa11.06□□□□□ -0.64
PKNOX1-209ENST00000560448 TCTEX1D2Q8WW35 142 aa11.06□□□□□ -0.64
PKNOX1-209ENST00000560448 NAA60Q9H7X0 242 aa11.06□□□□□ -0.64
PKNOX1-209ENST00000560448 CCL28Q9NRJ3 127 aa11.06□□□□□ -0.64
PKNOX1-209ENST00000560448 PSMB11A5LHX3 300 aa11.05□□□□□ -0.64
PKNOX1-209ENST00000560448 M0QZ24 198 aa11.05□□□□□ -0.64
PKNOX1-209ENST00000560448 FBXO24O75426 580 aa11.05□□□□□ -0.64
PKNOX1-209ENST00000560448 OPN1MWP04001 364 aa11.05□□□□□ -0.64
PKNOX1-209ENST00000560448 OPN1MW2P0DN77 364 aa11.05□□□□□ -0.64
PKNOX1-209ENST00000560448 OPN1MW3P0DN78 364 aa11.05□□□□□ -0.64
PKNOX1-209ENST00000560448 CRIP2P52943 208 aaPredicted RBP11.05□□□□□ -0.64
PKNOX1-209ENST00000560448 UBE2KP61086 200 aa11.05□□□□□ -0.64
PKNOX1-209ENST00000560448 RND3P61587 244 aa11.05□□□□□ -0.64
PKNOX1-209ENST00000560448 TMEM187Q14656 261 aa11.05□□□□□ -0.64
PKNOX1-209ENST00000560448 ZNF818PQ6ZRF7 136 aa11.05□□□□□ -0.64
PKNOX1-209ENST00000560448 PPP1R27Q86WC6 154 aa11.05□□□□□ -0.64
PKNOX1-209ENST00000560448 STPG2Q8N412 459 aa11.05□□□□□ -0.64
PKNOX1-209ENST00000560448 SEC22AQ96IW7 307 aa11.05□□□□□ -0.64
PKNOX1-209ENST00000560448 NMES1Q9C002 83 aa11.05□□□□□ -0.64
PKNOX1-209ENST00000560448 SLC2A9Q9NRM0 540 aa11.05□□□□□ -0.64
PKNOX1-209ENST00000560448 METTL1Q9UBP6 276 aaKnown RBP11.05□□□□□ -0.64
PKNOX1-209ENST00000560448 STAB1Q9NY15 2570 aa11.04□□□□□ -0.64
PKNOX1-209ENST00000560448 TEX13DA0A0J9YY54 714 aaPredicted RBP11.04□□□□□ -0.64
PKNOX1-209ENST00000560448 FCGR3BO75015 233 aa11.04□□□□□ -0.64
PKNOX1-209ENST00000560448 ADAP1O75689 374 aa11.04□□□□□ -0.64
PKNOX1-209ENST00000560448 CRYZL1O95825 349 aa11.04□□□□□ -0.64
PKNOX1-209ENST00000560448 HRASP01112 189 aa11.04□□□□□ -0.64
PKNOX1-209ENST00000560448 FGF2P09038 288 aa11.04□□□□□ -0.64
PKNOX1-209ENST00000560448 SLC25A4P12235 298 aa11.04□□□□□ -0.64
PKNOX1-209ENST00000560448 VDAC1P21796 283 aa11.04□□□□□ -0.64
PKNOX1-209ENST00000560448 TMEM267Q0VDI3 215 aaPredicted RBP11.04□□□□□ -0.64
PKNOX1-209ENST00000560448 IL15RAQ13261 267 aa11.04□□□□□ -0.64
PKNOX1-209ENST00000560448 TMEM65Q6PI78 240 aa11.04□□□□□ -0.64
PKNOX1-209ENST00000560448 GSG1LQ6UXU4 331 aa11.04□□□□□ -0.64
PKNOX1-209ENST00000560448 LRTM2Q8N967 370 aa11.04□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms