RNA–Protein interactions for RNA: ENST00000560447.1

RTF1-206, Transcript of RTF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 3

Gene RTF1, Length 551 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1-206ENST00000560447 OR4A5Q8NH83 315 aa7.98□□□□□ -1.13
RTF1-206ENST00000560447 SNRNP40Q96DI7 357 aaKnown RBP7.98□□□□□ -1.13
RTF1-206ENST00000560447 NEIL1Q96FI4 390 aaPredicted RBP7.98□□□□□ -1.13
RTF1-206ENST00000560447 RHOVQ96L33 236 aa7.98□□□□□ -1.13
RTF1-206ENST00000560447 YPEL4Q96NS1 127 aa7.98□□□□□ -1.13
RTF1-206ENST00000560447 CCL13Q99616 98 aa7.98□□□□□ -1.13
RTF1-206ENST00000560447 SCNM1Q9BWG6 230 aa7.98□□□□□ -1.13
RTF1-206ENST00000560447 VSIRQ9H7M9 311 aa7.98□□□□□ -1.13
RTF1-206ENST00000560447 SAP30LQ9HAJ7 183 aa7.98□□□□□ -1.13
RTF1-206ENST00000560447 ENY2Q9NPA8 101 aa7.98□□□□□ -1.13
RTF1-206ENST00000560447 HEYLQ9NQ87 328 aaPredicted RBP7.98□□□□□ -1.13
RTF1-206ENST00000560447 BET1LQ9NYM9 111 aa7.98□□□□□ -1.13
RTF1-206ENST00000560447 SLC25A10Q9UBX3 287 aaPredicted RBP7.98□□□□□ -1.13
RTF1-206ENST00000560447 TCF19Q9Y242 345 aa7.98□□□□□ -1.13
RTF1-206ENST00000560447 PUS1Q9Y606 427 aaKnown RBP eCLIP7.98□□□□□ -1.13
RTF1-206ENST00000560447 A0A1B0GV50 99 aa7.97□□□□□ -1.13
RTF1-206ENST00000560447 MED19A0JLT2 244 aaPredicted RBP7.97□□□□□ -1.13
RTF1-206ENST00000560447 B9A039 149 aa7.97□□□□□ -1.13
RTF1-206ENST00000560447 SLC31A2O15432 143 aa7.97□□□□□ -1.13
RTF1-206ENST00000560447 NDUFB3O43676 98 aa7.97□□□□□ -1.13
RTF1-206ENST00000560447 IFNA10P01566 189 aa7.97□□□□□ -1.13
RTF1-206ENST00000560447 APOA2P02652 100 aa7.97□□□□□ -1.13
RTF1-206ENST00000560447 GYPAP02724 150 aa7.97□□□□□ -1.13
RTF1-206ENST00000560447 COL8A1P27658 744 aa7.97□□□□□ -1.13
RTF1-206ENST00000560447 APOBEC3AP31941 199 aaPredicted RBP7.97□□□□□ -1.13
RTF1-206ENST00000560447 CDC34P49427 236 aaPredicted RBP7.97□□□□□ -1.13
RTF1-206ENST00000560447 RAB31Q13636 194 aa7.97□□□□□ -1.13
RTF1-206ENST00000560447 LRRC10Q5BKY1 277 aa7.97□□□□□ -1.13
RTF1-206ENST00000560447 OR4A47Q6IF82 309 aa7.97□□□□□ -1.13
RTF1-206ENST00000560447 CYP2G1PQ6ZSU1 146 aa7.97□□□□□ -1.13
RTF1-206ENST00000560447 C22orf34Q6ZV56 151 aa7.97□□□□□ -1.13
RTF1-206ENST00000560447 LYG1Q8N1E2 194 aa7.97□□□□□ -1.13
RTF1-206ENST00000560447 OR13D1Q8NGV5 346 aa7.97□□□□□ -1.13
RTF1-206ENST00000560447 OR5B3Q8NH48 314 aa7.97□□□□□ -1.13
RTF1-206ENST00000560447 RNASE6Q93091 150 aaKnown RBP7.97□□□□□ -1.13
RTF1-206ENST00000560447 ZNF714Q96N38 554 aa7.97□□□□□ -1.13
RTF1-206ENST00000560447 SPOCK3Q9BQ16 436 aa7.97□□□□□ -1.13
RTF1-206ENST00000560447 NPVFQ9HCQ7 196 aa7.97□□□□□ -1.13
RTF1-206ENST00000560447 TMEM106BQ9NUM4 274 aa7.97□□□□□ -1.13
RTF1-206ENST00000560447 NAT8Q9UHE5 227 aa7.97□□□□□ -1.13
RTF1-206ENST00000560447 A0A087X0M5 115 aa7.96□□□□□ -1.14
RTF1-206ENST00000560447 TRBV23-1A0A0A0MS06 115 aa7.96□□□□□ -1.14
RTF1-206ENST00000560447 A0A1B0GX30 115 aa7.96□□□□□ -1.14
RTF1-206ENST00000560447 ZFP92A6NM28 416 aa7.96□□□□□ -1.14
RTF1-206ENST00000560447 UPK2O00526 184 aa7.96□□□□□ -1.14
RTF1-206ENST00000560447 KBTBD11O94819 623 aa7.96□□□□□ -1.14
RTF1-206ENST00000560447 VENTXO95231 258 aa7.96□□□□□ -1.14
RTF1-206ENST00000560447 NPY1RP25929 384 aa7.96□□□□□ -1.14
RTF1-206ENST00000560447 RND2P52198 227 aa7.96□□□□□ -1.14
RTF1-206ENST00000560447 ZNF137PP52743 207 aa7.96□□□□□ -1.14
RTF1-206ENST00000560447 ELLP55199 621 aaPredicted RBP7.96□□□□□ -1.14
RTF1-206ENST00000560447 RPL31P62899 125 aaKnown RBP7.96□□□□□ -1.14
RTF1-206ENST00000560447 PRCDQ00LT1 54 aa7.96□□□□□ -1.14
RTF1-206ENST00000560447 HABP2Q14520 560 aaPredicted RBP7.96□□□□□ -1.14
RTF1-206ENST00000560447 TMEM177Q53S58 311 aa7.96□□□□□ -1.14
RTF1-206ENST00000560447 FAM201AQ5SY85 155 aa7.96□□□□□ -1.14
RTF1-206ENST00000560447 FAM216BQ8N7L0 139 aa7.96□□□□□ -1.14
RTF1-206ENST00000560447 ZNF383Q8NA42 475 aa7.96□□□□□ -1.14
RTF1-206ENST00000560447 SLC24A4Q8NFF2 622 aa7.96□□□□□ -1.14
RTF1-206ENST00000560447 VSTM2AQ8TAG5 236 aa7.96□□□□□ -1.14
RTF1-206ENST00000560447 NANPQ8TBE9 248 aa7.96□□□□□ -1.14
RTF1-206ENST00000560447 TNFRSF14Q92956 283 aa7.96□□□□□ -1.14
RTF1-206ENST00000560447 TMEM186Q96B77 213 aa7.96□□□□□ -1.14
RTF1-206ENST00000560447 SSX3Q99909 188 aa7.96□□□□□ -1.14
RTF1-206ENST00000560447 PCGF1Q9BSM1 259 aa7.96□□□□□ -1.14
RTF1-206ENST00000560447 SDF2L1Q9HCN8 221 aa7.96□□□□□ -1.14
RTF1-206ENST00000560447 SLC35D1Q9NTN3 355 aa7.96□□□□□ -1.14
RTF1-206ENST00000560447 ARL2-SNX15V9GYD0 113 aa7.96□□□□□ -1.14
RTF1-206ENST00000560447 TET2Q6N021 2002 aaPredicted RBP7.96□□□□□ -1.14
RTF1-206ENST00000560447 ZGRF1Q86YA3 2104 aa7.96□□□□□ -1.14
RTF1-206ENST00000560447 A0A1W2PPE2 198 aa7.95□□□□□ -1.14
RTF1-206ENST00000560447 A0A1W2PPH5 198 aa7.95□□□□□ -1.14
RTF1-206ENST00000560447 SHISA9B4DS77 424 aa7.95□□□□□ -1.14
RTF1-206ENST00000560447 F6UZH7 168 aa7.95□□□□□ -1.14
RTF1-206ENST00000560447 CLDN34H7C241 214 aa7.95□□□□□ -1.14
RTF1-206ENST00000560447 TMPRSS2O15393 492 aa7.95□□□□□ -1.14
RTF1-206ENST00000560447 PDE6DO43924 150 aa7.95□□□□□ -1.14
RTF1-206ENST00000560447 IGKV1D-33P01593 117 aa7.95□□□□□ -1.14
RTF1-206ENST00000560447 IGKV1-33P01594 117 aa7.95□□□□□ -1.14
RTF1-206ENST00000560447 RBP4P02753 201 aa7.95□□□□□ -1.14
RTF1-206ENST00000560447 OPN1MWP04001 364 aa7.95□□□□□ -1.14
RTF1-206ENST00000560447 S100A8P05109 93 aa7.95□□□□□ -1.14
RTF1-206ENST00000560447 CD3EP07766 207 aa7.95□□□□□ -1.14
RTF1-206ENST00000560447 OPN1MW2P0DN77 364 aa7.95□□□□□ -1.14
RTF1-206ENST00000560447 OPN1MW3P0DN78 364 aa7.95□□□□□ -1.14
RTF1-206ENST00000560447 SELLP14151 372 aa7.95□□□□□ -1.14
RTF1-206ENST00000560447 NDUFB7P17568 137 aa7.95□□□□□ -1.14
RTF1-206ENST00000560447 IL3RAP26951 378 aa7.95□□□□□ -1.14
RTF1-206ENST00000560447 CA7P43166 264 aa7.95□□□□□ -1.14
RTF1-206ENST00000560447 CCL8P80075 99 aa7.95□□□□□ -1.14
RTF1-206ENST00000560447 TFF3Q07654 80 aa7.95□□□□□ -1.14
RTF1-206ENST00000560447 AKIRIN2Q53H80 203 aa7.95□□□□□ -1.14
RTF1-206ENST00000560447 WDR25Q64LD2 544 aaPredicted RBP7.95□□□□□ -1.14
RTF1-206ENST00000560447 SSX7Q7RTT5 188 aa7.95□□□□□ -1.14
RTF1-206ENST00000560447 PDPNQ86YL7 162 aa7.95□□□□□ -1.14
RTF1-206ENST00000560447 LINC00518Q8N0U6 118 aa7.95□□□□□ -1.14
RTF1-206ENST00000560447 Q8N7P7 452 aa7.95□□□□□ -1.14
RTF1-206ENST00000560447 DEFB108BQ8NET1 73 aa7.95□□□□□ -1.14
RTF1-206ENST00000560447 OR1L8Q8NGR8 309 aa7.95□□□□□ -1.14
RTF1-206ENST00000560447 ZCCHC14Q8WYQ9 949 aaKnown RBP7.95□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 7.1 ms