RNA–Protein interactions for RNA: ENST00000560299.1

SPG11-221, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 3

Gene SPG11, Length 437 nt, Biotype retained intron, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-221ENST00000560299 BRWD1-AS2P59051 145 aa5.19□□□□□ -1.58
SPG11-221ENST00000560299 LINC00205P59089 165 aa5.19□□□□□ -1.58
SPG11-221ENST00000560299 S100A10P60903 97 aa5.19□□□□□ -1.58
SPG11-221ENST00000560299 PRB3Q04118 309 aaPredicted RBP5.19□□□□□ -1.58
SPG11-221ENST00000560299 DIAPH2-AS1Q14236 149 aa5.19□□□□□ -1.58
SPG11-221ENST00000560299 HES1Q14469 280 aa5.19□□□□□ -1.58
SPG11-221ENST00000560299 POU2AF1Q16633 256 aa5.19□□□□□ -1.58
SPG11-221ENST00000560299 NMSQ5H8A3 153 aa5.19□□□□□ -1.58
SPG11-221ENST00000560299 LHFPL4Q7Z7J7 247 aa5.19□□□□□ -1.58
SPG11-221ENST00000560299 NOXA1Q86UR1 476 aa5.19□□□□□ -1.58
SPG11-221ENST00000560299 OR2T10Q8NGZ9 312 aa5.19□□□□□ -1.58
SPG11-221ENST00000560299 PPP1R1CQ8WVI7 109 aa5.19□□□□□ -1.58
SPG11-221ENST00000560299 GPR146Q96CH1 333 aa5.19□□□□□ -1.58
SPG11-221ENST00000560299 OR10C1Q96KK4 312 aa5.19□□□□□ -1.58
SPG11-221ENST00000560299 FYTTD1Q96QD9 318 aaKnown RBP5.19□□□□□ -1.58
SPG11-221ENST00000560299 BET1LQ9NYM9 111 aa5.19□□□□□ -1.58
SPG11-221ENST00000560299 C1RLQ9NZP8 487 aa5.19□□□□□ -1.58
SPG11-221ENST00000560299 KIAA1456Q9P272 454 aa5.19□□□□□ -1.58
SPG11-221ENST00000560299 CACNG5Q9UF02 275 aa5.19□□□□□ -1.58
SPG11-221ENST00000560299 PRNDQ9UKY0 176 aa5.19□□□□□ -1.58
SPG11-221ENST00000560299 IGHV3-72A0A0B4J1Y9 119 aa5.18□□□□□ -1.58
SPG11-221ENST00000560299 A0A1W2PPI3 338 aa5.18□□□□□ -1.58
SPG11-221ENST00000560299 MPTX1A8MV57 137 aa5.18□□□□□ -1.58
SPG11-221ENST00000560299 L7N2F9 121 aa5.18□□□□□ -1.58
SPG11-221ENST00000560299 CRLF1O75462 422 aa5.18□□□□□ -1.58
SPG11-221ENST00000560299 ACTL6BO94805 426 aa5.18□□□□□ -1.58
SPG11-221ENST00000560299 VENTXO95231 258 aa5.18□□□□□ -1.58
SPG11-221ENST00000560299 SPDEFO95238 335 aa5.18□□□□□ -1.58
SPG11-221ENST00000560299 MPC2O95563 127 aa5.18□□□□□ -1.58
SPG11-221ENST00000560299 SCGB1D2O95969 90 aa5.18□□□□□ -1.58
SPG11-221ENST00000560299 IFNA17P01571 189 aa5.18□□□□□ -1.58
SPG11-221ENST00000560299 IGKV1-5P01602 117 aa5.18□□□□□ -1.58
SPG11-221ENST00000560299 IGKV1-16P04430 117 aa5.18□□□□□ -1.58
SPG11-221ENST00000560299 FGF2P09038 288 aa5.18□□□□□ -1.58
SPG11-221ENST00000560299 HNF1AP20823 631 aa5.18□□□□□ -1.58
SPG11-221ENST00000560299 EIF2B2P49770 351 aaKnown RBP5.18□□□□□ -1.58
SPG11-221ENST00000560299 DYNLT3P51808 116 aa5.18□□□□□ -1.58
SPG11-221ENST00000560299 SPCS3P61009 180 aa5.18□□□□□ -1.58
SPG11-221ENST00000560299 UBE2KP61086 200 aa5.18□□□□□ -1.58
SPG11-221ENST00000560299 VAMP2P63027 116 aa5.18□□□□□ -1.58
SPG11-221ENST00000560299 ID3Q02535 119 aa5.18□□□□□ -1.58
SPG11-221ENST00000560299 RAB32Q13637 225 aa5.18□□□□□ -1.58
SPG11-221ENST00000560299 HABP2Q14520 560 aaPredicted RBP5.18□□□□□ -1.58
SPG11-221ENST00000560299 PLGLAQ15195 96 aa5.18□□□□□ -1.58
SPG11-221ENST00000560299 LINC01559Q495D7 138 aa5.18□□□□□ -1.58
SPG11-221ENST00000560299 LRRC37A5PQ49AS3 106 aa5.18□□□□□ -1.58
SPG11-221ENST00000560299 C11orf87Q6NUJ2 197 aa5.18□□□□□ -1.58
SPG11-221ENST00000560299 SSX9Q7RTT3 188 aa5.18□□□□□ -1.58
SPG11-221ENST00000560299 ZNF546Q86UE3 836 aa5.18□□□□□ -1.58
SPG11-221ENST00000560299 THNSL2Q86YJ6 484 aa5.18□□□□□ -1.58
SPG11-221ENST00000560299 MRPL41Q8IXM3 137 aaKnown RBP5.18□□□□□ -1.58
SPG11-221ENST00000560299 MMD2Q8IY49 270 aa5.18□□□□□ -1.58
SPG11-221ENST00000560299 TEX45Q8NA69 505 aa5.18□□□□□ -1.58
SPG11-221ENST00000560299 INO80EQ8NBZ0 244 aaPredicted RBP5.18□□□□□ -1.58
SPG11-221ENST00000560299 OR8H1Q8NGG4 311 aa5.18□□□□□ -1.58
SPG11-221ENST00000560299 OR4D5Q8NGN0 318 aa5.18□□□□□ -1.58
SPG11-221ENST00000560299 CIB3Q96Q77 187 aaPredicted RBP5.18□□□□□ -1.58
SPG11-221ENST00000560299 MEGF9Q9H1U4 602 aa5.18□□□□□ -1.58
SPG11-221ENST00000560299 ENY2Q9NPA8 101 aa5.18□□□□□ -1.58
SPG11-221ENST00000560299 TMEM140Q9NV12 185 aa5.18□□□□□ -1.58
SPG11-221ENST00000560299 PITPNC1Q9UKF7 332 aa5.18□□□□□ -1.58
SPG11-221ENST00000560299 NUP50Q9UKX7 468 aa5.18□□□□□ -1.58
SPG11-221ENST00000560299 LSM5Q9Y4Y9 91 aaKnown RBP5.18□□□□□ -1.58
SPG11-221ENST00000560299 POMT1Q9Y6A1 747 aa5.18□□□□□ -1.58
SPG11-221ENST00000560299 COL6A5A8TX70 2615 aa5.18□□□□□ -1.58
SPG11-221ENST00000560299 IGHV3OR16-10A0A075B7F0 116 aa5.17□□□□□ -1.58
SPG11-221ENST00000560299 FXYD6-FXYD2A0A087WZ82 144 aa5.17□□□□□ -1.58
SPG11-221ENST00000560299 BTBD17A6NE02 478 aa5.17□□□□□ -1.58
SPG11-221ENST00000560299 HMSDA8MTL9 139 aa5.17□□□□□ -1.58
SPG11-221ENST00000560299 E5RGE8 158 aa5.17□□□□□ -1.58
SPG11-221ENST00000560299 UPK2O00526 184 aa5.17□□□□□ -1.58
SPG11-221ENST00000560299 SYNGR2O43760 224 aa5.17□□□□□ -1.58
SPG11-221ENST00000560299 GPR137BO60478 399 aa5.17□□□□□ -1.58
SPG11-221ENST00000560299 PITX3O75364 302 aa5.17□□□□□ -1.58
SPG11-221ENST00000560299 DEDDO75618 318 aa5.17□□□□□ -1.58
SPG11-221ENST00000560299 KBTBD11O94819 623 aa5.17□□□□□ -1.58
SPG11-221ENST00000560299 IGKV1D-33P01593 117 aa5.17□□□□□ -1.58
SPG11-221ENST00000560299 IGKV1-33P01594 117 aa5.17□□□□□ -1.58
SPG11-221ENST00000560299 MBPP02686 304 aaPredicted RBP5.17□□□□□ -1.58
SPG11-221ENST00000560299 SNRNP70P08621 437 aaKnown RBP5.17□□□□□ -1.58
SPG11-221ENST00000560299 P0C879 139 aa5.17□□□□□ -1.58
SPG11-221ENST00000560299 FAM157CP0CG43 387 aa5.17□□□□□ -1.58
SPG11-221ENST00000560299 SAA1P0DJI8 122 aaPredicted RBP5.17□□□□□ -1.58
SPG11-221ENST00000560299 IGHV4-38-2P0DP08 117 aa5.17□□□□□ -1.58
SPG11-221ENST00000560299 SLC25A4P12235 298 aa5.17□□□□□ -1.58
SPG11-221ENST00000560299 TMEM11P17152 192 aa5.17□□□□□ -1.58
SPG11-221ENST00000560299 MAS1LP35410 378 aa5.17□□□□□ -1.58
SPG11-221ENST00000560299 RPL23AP62750 156 aaKnown RBP5.17□□□□□ -1.58
SPG11-221ENST00000560299 RPL8P62917 257 aaKnown RBP5.17□□□□□ -1.58
SPG11-221ENST00000560299 RPP30P78346 268 aaKnown RBP5.17□□□□□ -1.58
SPG11-221ENST00000560299 IL15RAQ13261 267 aa5.17□□□□□ -1.58
SPG11-221ENST00000560299 EBI3Q14213 229 aa5.17□□□□□ -1.58
SPG11-221ENST00000560299 MMDQ15546 238 aa5.17□□□□□ -1.58
SPG11-221ENST00000560299 AANATQ16613 207 aa5.17□□□□□ -1.58
SPG11-221ENST00000560299 OR4A47Q6IF82 309 aa5.17□□□□□ -1.58
SPG11-221ENST00000560299 PRSS54Q6PEW0 395 aa5.17□□□□□ -1.58
SPG11-221ENST00000560299 TMEM65Q6PI78 240 aa5.17□□□□□ -1.58
SPG11-221ENST00000560299 BRD3OSQ6XYD6 125 aa5.17□□□□□ -1.58
SPG11-221ENST00000560299 ZNF429Q86V71 674 aa5.17□□□□□ -1.58
SPG11-221ENST00000560299 FOXRED2Q8IWF2 684 aa5.17□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms