RNA–Protein interactions for RNA: ENST00000560005.6

PSEN1-225, Transcript of presenilin 1, humanhuman

TSL 3

Gene PSEN1, Length 699 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-225ENST00000560005 B9D2Q9BPU9 175 aa16.35■□□□□ 0.21
PSEN1-225ENST00000560005 WNT10AQ9GZT5 417 aa16.35■□□□□ 0.21
PSEN1-225ENST00000560005 TMEM133Q9H2Q1 129 aa16.35■□□□□ 0.21
PSEN1-225ENST00000560005 CCSO14618 274 aa16.34■□□□□ 0.21
PSEN1-225ENST00000560005 TOR1AO14656 332 aa16.34■□□□□ 0.21
PSEN1-225ENST00000560005 ADAP1O75689 374 aa16.34■□□□□ 0.21
PSEN1-225ENST00000560005 MMP23AO75900 390 aa16.34■□□□□ 0.21
PSEN1-225ENST00000560005 PET100P0DJ07 73 aa16.34■□□□□ 0.21
PSEN1-225ENST00000560005 PF4V1P10720 104 aa16.34■□□□□ 0.21
PSEN1-225ENST00000560005 SLC25A6P12236 298 aa16.34■□□□□ 0.21
PSEN1-225ENST00000560005 C4BPBP20851 252 aa16.34■□□□□ 0.21
PSEN1-225ENST00000560005 THBS3P49746 956 aa16.34■□□□□ 0.21
PSEN1-225ENST00000560005 TCTEX1D2Q8WW35 142 aa16.34■□□□□ 0.21
PSEN1-225ENST00000560005 LSM10Q969L4 123 aaKnown RBP16.34■□□□□ 0.21
PSEN1-225ENST00000560005 BIRC6Q9NR09 4857 aa16.34■□□□□ 0.21
PSEN1-225ENST00000560005 J3QR06 171 aa16.33■□□□□ 0.2
PSEN1-225ENST00000560005 RBFOX2O43251 390 aaKnown RBP eCLIP16.33■□□□□ 0.2
PSEN1-225ENST00000560005 PSMB6P28072 239 aa16.33■□□□□ 0.2
PSEN1-225ENST00000560005 DUTP33316 252 aaKnown RBP16.33■□□□□ 0.2
PSEN1-225ENST00000560005 IAH1Q2TAA2 248 aaPredicted RBP16.33■□□□□ 0.2
PSEN1-225ENST00000560005 THOC7Q6I9Y2 204 aaKnown RBP16.33■□□□□ 0.2
PSEN1-225ENST00000560005 FAM53AQ6NSI3 398 aaPredicted RBP16.33■□□□□ 0.2
PSEN1-225ENST00000560005 LYZL2Q7Z4W2 148 aa16.33■□□□□ 0.2
PSEN1-225ENST00000560005 THAP6Q8TBB0 222 aa16.33■□□□□ 0.2
PSEN1-225ENST00000560005 SEC22AQ96IW7 307 aa16.33■□□□□ 0.2
PSEN1-225ENST00000560005 SACSQ9NZJ4 4579 aa16.33■□□□□ 0.2
PSEN1-225ENST00000560005 HMSDA8MTL9 139 aa16.32■□□□□ 0.2
PSEN1-225ENST00000560005 M0R1X1 148 aa16.32■□□□□ 0.2
PSEN1-225ENST00000560005 RLN2P04090 185 aa16.32■□□□□ 0.2
PSEN1-225ENST00000560005 GNG10P50151 68 aa16.32■□□□□ 0.2
PSEN1-225ENST00000560005 RAB13P51153 203 aa16.32■□□□□ 0.2
PSEN1-225ENST00000560005 TMEM219Q86XT9 240 aa16.32■□□□□ 0.2
PSEN1-225ENST00000560005 FAM219AQ8IW50 185 aa16.32■□□□□ 0.2
PSEN1-225ENST00000560005 ABHD12Q8N2K0 398 aa16.32■□□□□ 0.2
PSEN1-225ENST00000560005 C11orf42Q8N5U0 333 aa16.32■□□□□ 0.2
PSEN1-225ENST00000560005 SLC35G3Q8N808 338 aa16.32■□□□□ 0.2
PSEN1-225ENST00000560005 OR10X1Q8NGY0 326 aa16.32■□□□□ 0.2
PSEN1-225ENST00000560005 RRNAD1Q96FB5 475 aaKnown RBP16.32■□□□□ 0.2
PSEN1-225ENST00000560005 PRSS22Q9GZN4 317 aa16.32■□□□□ 0.2
PSEN1-225ENST00000560005 PRR13Q9NZ81 148 aa16.32■□□□□ 0.2
PSEN1-225ENST00000560005 TCF19Q9Y242 345 aa16.32■□□□□ 0.2
PSEN1-225ENST00000560005 PF4P02776 101 aa16.31■□□□□ 0.2
PSEN1-225ENST00000560005 SLC25A4P12235 298 aa16.31■□□□□ 0.2
PSEN1-225ENST00000560005 HOXD3P31249 432 aaPredicted RBP16.31■□□□□ 0.2
PSEN1-225ENST00000560005 LPAR6P43657 344 aa16.31■□□□□ 0.2
PSEN1-225ENST00000560005 TMEM95Q3KNT9 176 aa16.31■□□□□ 0.2
PSEN1-225ENST00000560005 ARSJQ5FYB0 599 aaPredicted RBP16.31■□□□□ 0.2
PSEN1-225ENST00000560005 TMEM65Q6PI78 240 aa16.31■□□□□ 0.2
PSEN1-225ENST00000560005 SPAG16Q8N0X2 631 aa16.31■□□□□ 0.2
PSEN1-225ENST00000560005 ZBTB8BQ8NAP8 495 aaPredicted RBP16.31■□□□□ 0.2
PSEN1-225ENST00000560005 OR13D1Q8NGV5 346 aa16.31■□□□□ 0.2
PSEN1-225ENST00000560005 RNASE11Q8TAA1 199 aaKnown RBP16.31■□□□□ 0.2
PSEN1-225ENST00000560005 LHFPL5Q8TAF8 219 aa16.31■□□□□ 0.2
PSEN1-225ENST00000560005 PPP1R1CQ8WVI7 109 aa16.31■□□□□ 0.2
PSEN1-225ENST00000560005 LEAP2Q969E1 77 aa16.31■□□□□ 0.2
PSEN1-225ENST00000560005 RCC1LQ96I51 464 aaKnown RBP16.31■□□□□ 0.2
PSEN1-225ENST00000560005 OR10C1Q96KK4 312 aa16.31■□□□□ 0.2
PSEN1-225ENST00000560005 AIFM2Q9BRQ8 373 aa16.31■□□□□ 0.2
PSEN1-225ENST00000560005 CLEC7AQ9BXN2 247 aa16.31■□□□□ 0.2
PSEN1-225ENST00000560005 HEXA-AS1Q9H8Q6 139 aa16.31■□□□□ 0.2
PSEN1-225ENST00000560005 GSKIPQ9P0R6 139 aa16.31■□□□□ 0.2
PSEN1-225ENST00000560005 AMMECR1Q9Y4X0 333 aaPredicted RBP16.31■□□□□ 0.2
PSEN1-225ENST00000560005 SAA2-SAA4A0A096LPE2 208 aa16.3■□□□□ 0.2
PSEN1-225ENST00000560005 A0A1B0GU03 582 aa16.3■□□□□ 0.2
PSEN1-225ENST00000560005 SMLR1H3BR10 107 aa16.3■□□□□ 0.2
PSEN1-225ENST00000560005 SLC31A2O15432 143 aa16.3■□□□□ 0.2
PSEN1-225ENST00000560005 SAA2P0DJI9 122 aaPredicted RBP16.3■□□□□ 0.2
PSEN1-225ENST00000560005 RRASP10301 218 aa16.3■□□□□ 0.2
PSEN1-225ENST00000560005 COX7A1P24310 79 aa16.3■□□□□ 0.2
PSEN1-225ENST00000560005 ARHGDIBP52566 201 aa16.3■□□□□ 0.2
PSEN1-225ENST00000560005 LGALS4P56470 323 aa16.3■□□□□ 0.2
PSEN1-225ENST00000560005 SMCO1Q147U7 214 aa16.3■□□□□ 0.2
PSEN1-225ENST00000560005 Q6ZS46 218 aa16.3■□□□□ 0.2
PSEN1-225ENST00000560005 GPHA2Q96T91 129 aa16.3■□□□□ 0.2
PSEN1-225ENST00000560005 PLEKHA2Q9HB19 425 aa16.3■□□□□ 0.2
PSEN1-225ENST00000560005 A6NDX4 124 aa16.29■□□□□ 0.2
PSEN1-225ENST00000560005 HPRT1P00492 218 aa16.29■□□□□ 0.2
PSEN1-225ENST00000560005 IGHV3-7P01780 117 aa16.29■□□□□ 0.2
PSEN1-225ENST00000560005 ZNF137PP52743 207 aa16.29■□□□□ 0.2
PSEN1-225ENST00000560005 IL15RAQ13261 267 aa16.29■□□□□ 0.2
PSEN1-225ENST00000560005 ZNF585BQ52M93 769 aa16.29■□□□□ 0.2
PSEN1-225ENST00000560005 ZNF833PQ6ZTB9 187 aa16.29■□□□□ 0.2
PSEN1-225ENST00000560005 LHFPL4Q7Z7J7 247 aa16.29■□□□□ 0.2
PSEN1-225ENST00000560005 ODF3L1Q8IXM7 274 aa16.29■□□□□ 0.2
PSEN1-225ENST00000560005 DYNAPQ8N1N2 210 aa16.29■□□□□ 0.2
PSEN1-225ENST00000560005 C5orf30Q96GV9 206 aa16.29■□□□□ 0.2
PSEN1-225ENST00000560005 A0A1W2PPE3 182 aa16.28■□□□□ 0.2
PSEN1-225ENST00000560005 MPC2O95563 127 aa16.28■□□□□ 0.2
PSEN1-225ENST00000560005 NUP62P37198 522 aaPredicted RBP16.28■□□□□ 0.2
PSEN1-225ENST00000560005 VDAC2P45880 294 aaPredicted RBP16.28■□□□□ 0.2
PSEN1-225ENST00000560005 AKR1C2P52895 323 aa16.28■□□□□ 0.2
PSEN1-225ENST00000560005 RPL30P62888 115 aaKnown RBP16.28■□□□□ 0.2
PSEN1-225ENST00000560005 BLCAPP62952 87 aa16.28■□□□□ 0.2
PSEN1-225ENST00000560005 EGFEM1PQ0D2K5 195 aa16.28■□□□□ 0.2
PSEN1-225ENST00000560005 RPL39P5Q59GN2 51 aa16.28■□□□□ 0.2
PSEN1-225ENST00000560005 NMSQ5H8A3 153 aa16.28■□□□□ 0.2
PSEN1-225ENST00000560005 OR5AU1Q8NGC0 362 aa16.28■□□□□ 0.2
PSEN1-225ENST00000560005 OR4S2Q8NH73 311 aa16.28■□□□□ 0.2
PSEN1-225ENST00000560005 WDR89Q96FK6 387 aaPredicted RBP16.28■□□□□ 0.2
PSEN1-225ENST00000560005 ZNF251Q9BRH9 671 aa16.28■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 58 ms