RNA–Protein interactions for RNA: ENST00000559754.1

SPG11-218, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 5

Gene SPG11, Length 411 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-218ENST00000559754 C1QBP02746 253 aa2.12□□□□□ -2.07
SPG11-218ENST00000559754 IDO1P14902 403 aa2.12□□□□□ -2.07
SPG11-218ENST00000559754 NPPCP23582 126 aa2.12□□□□□ -2.07
SPG11-218ENST00000559754 RPS20P60866 119 aaKnown RBP2.12□□□□□ -2.07
SPG11-218ENST00000559754 TBPL1P62380 186 aa2.12□□□□□ -2.07
SPG11-218ENST00000559754 C12orf74Q32Q52 190 aa2.12□□□□□ -2.07
SPG11-218ENST00000559754 ZFAND6Q6FIF0 208 aa2.12□□□□□ -2.07
SPG11-218ENST00000559754 C16orf47Q6ZP98 133 aaPredicted RBP2.12□□□□□ -2.07
SPG11-218ENST00000559754 Q6ZS49 121 aa2.12□□□□□ -2.07
SPG11-218ENST00000559754 GRINAQ7Z429 371 aa2.12□□□□□ -2.07
SPG11-218ENST00000559754 ADM2Q7Z4H4 148 aa2.12□□□□□ -2.07
SPG11-218ENST00000559754 LYZL2Q7Z4W2 148 aa2.12□□□□□ -2.07
SPG11-218ENST00000559754 GPHB5Q86YW7 130 aa2.12□□□□□ -2.07
SPG11-218ENST00000559754 BPIFB6Q8NFQ5 453 aa2.12□□□□□ -2.07
SPG11-218ENST00000559754 OR4K13Q8NH42 304 aa2.12□□□□□ -2.07
SPG11-218ENST00000559754 RAB2BQ8WUD1 216 aa2.12□□□□□ -2.07
SPG11-218ENST00000559754 DYDC1Q8WWB3 177 aa2.12□□□□□ -2.07
SPG11-218ENST00000559754 C20orf27Q9GZN8 174 aa2.12□□□□□ -2.07
SPG11-218ENST00000559754 MIXL1Q9H2W2 232 aa2.12□□□□□ -2.07
SPG11-218ENST00000559754 CISHQ9NSE2 258 aa2.12□□□□□ -2.07
SPG11-218ENST00000559754 UQCC1Q9NVA1 299 aa2.12□□□□□ -2.07
SPG11-218ENST00000559754 SLC23A2Q9UGH3 650 aa2.12□□□□□ -2.07
SPG11-218ENST00000559754 UTP11Q9Y3A2 253 aaKnown RBP2.12□□□□□ -2.07
SPG11-218ENST00000559754 TMEM56-RWDD3S4R434 201 aa2.12□□□□□ -2.07
SPG11-218ENST00000559754 ZCCHC11Q5TAX3 1644 aaKnown RBP2.12□□□□□ -2.07
SPG11-218ENST00000559754 PLA2R1Q13018 1463 aa2.12□□□□□ -2.07
SPG11-218ENST00000559754 DSCAMO60469 2012 aa2.12□□□□□ -2.07
SPG11-218ENST00000559754 SCN10AQ9Y5Y9 1956 aa2.11□□□□□ -2.07
SPG11-218ENST00000559754 C7orf66A4D0T2 115 aa2.11□□□□□ -2.07
SPG11-218ENST00000559754 TRAPPC13A5PLN9 417 aa2.11□□□□□ -2.07
SPG11-218ENST00000559754 A6NED7 52 aa2.11□□□□□ -2.07
SPG11-218ENST00000559754 C16orf90A8MZG2 172 aa2.11□□□□□ -2.07
SPG11-218ENST00000559754 H3BQ85 93 aa2.11□□□□□ -2.07
SPG11-218ENST00000559754 GPR31O00270 319 aa2.11□□□□□ -2.07
SPG11-218ENST00000559754 SLC17A3O00476 420 aa2.11□□□□□ -2.07
SPG11-218ENST00000559754 PIRO00625 290 aa2.11□□□□□ -2.07
SPG11-218ENST00000559754 LECT2O14960 151 aa2.11□□□□□ -2.07
SPG11-218ENST00000559754 SLC25A20O43772 301 aa2.11□□□□□ -2.07
SPG11-218ENST00000559754 C8GP07360 202 aa2.11□□□□□ -2.07
SPG11-218ENST00000559754 NBEAP1P0C6P0 100 aa2.11□□□□□ -2.07
SPG11-218ENST00000559754 CRABP2P29373 138 aa2.11□□□□□ -2.07
SPG11-218ENST00000559754 RAB4BP61018 213 aa2.11□□□□□ -2.07
SPG11-218ENST00000559754 EIF4EBP1Q13541 118 aaPredicted RBP2.11□□□□□ -2.07
SPG11-218ENST00000559754 TMEM69Q5SWH9 247 aa2.11□□□□□ -2.07
SPG11-218ENST00000559754 IBA57Q5T440 356 aaKnown RBP2.11□□□□□ -2.07
SPG11-218ENST00000559754 TMPPEQ6ZT21 453 aa2.11□□□□□ -2.07
SPG11-218ENST00000559754 OR13C8Q8NGS7 320 aa2.11□□□□□ -2.07
SPG11-218ENST00000559754 MRPL30Q8TCC3 161 aaKnown RBP2.11□□□□□ -2.07
SPG11-218ENST00000559754 RASSF5Q8WWW0 418 aa2.11□□□□□ -2.07
SPG11-218ENST00000559754 GPR146Q96CH1 333 aa2.11□□□□□ -2.07
SPG11-218ENST00000559754 NMNAT3Q96T66 252 aa2.11□□□□□ -2.07
SPG11-218ENST00000559754 ABCG5Q9H222 651 aa2.11□□□□□ -2.07
SPG11-218ENST00000559754 C11orf1Q9H5F2 150 aa2.11□□□□□ -2.07
SPG11-218ENST00000559754 BATF3Q9NR55 127 aa2.11□□□□□ -2.07
SPG11-218ENST00000559754 OR5V1Q9UGF6 321 aa2.11□□□□□ -2.07
SPG11-218ENST00000559754 NDUFAF1Q9Y375 327 aa2.11□□□□□ -2.07
SPG11-218ENST00000559754 SIPA1L1O43166 1804 aa2.11□□□□□ -2.07
SPG11-218ENST00000559754 DENND4BO75064 1496 aaPredicted RBP2.11□□□□□ -2.07
SPG11-218ENST00000559754 NID2Q14112 1375 aa2.1□□□□□ -2.07
SPG11-218ENST00000559754 UBR2Q8IWV8 1755 aa2.1□□□□□ -2.07
SPG11-218ENST00000559754 MIA2Q96PC5 1412 aa2.1□□□□□ -2.07
SPG11-218ENST00000559754 NEO1Q92859 1461 aa2.1□□□□□ -2.07
SPG11-218ENST00000559754 IGLV4-60A0A075B6I1 120 aa2.1□□□□□ -2.07
SPG11-218ENST00000559754 IGLV3-12A0A075B6K2 115 aa2.1□□□□□ -2.07
SPG11-218ENST00000559754 IGHV3OR16-8A0A075B7F1 116 aa2.1□□□□□ -2.07
SPG11-218ENST00000559754 A0A0J9YY10 115 aa2.1□□□□□ -2.07
SPG11-218ENST00000559754 A0A1B0GX78 115 aa2.1□□□□□ -2.07
SPG11-218ENST00000559754 VPS37CA5D8V6 355 aaPredicted RBP2.1□□□□□ -2.07
SPG11-218ENST00000559754 LRCOL1A6NCL2 159 aa2.1□□□□□ -2.07
SPG11-218ENST00000559754 ZNF98A6NK75 572 aa2.1□□□□□ -2.07
SPG11-218ENST00000559754 A8MWP6 167 aa2.1□□□□□ -2.07
SPG11-218ENST00000559754 NDUFB2O95178 105 aa2.1□□□□□ -2.07
SPG11-218ENST00000559754 ZNF682O95780 498 aa2.1□□□□□ -2.07
SPG11-218ENST00000559754 CRHP06850 196 aa2.1□□□□□ -2.07
SPG11-218ENST00000559754 SRP19P09132 144 aaKnown RBP2.1□□□□□ -2.07
SPG11-218ENST00000559754 RBP1P09455 135 aa2.1□□□□□ -2.07
SPG11-218ENST00000559754 CRABP1P29762 137 aa2.1□□□□□ -2.07
SPG11-218ENST00000559754 ERP29P30040 261 aaKnown RBP2.1□□□□□ -2.07
SPG11-218ENST00000559754 TSPEAR-AS2P59090 65 aa2.1□□□□□ -2.07
SPG11-218ENST00000559754 LDLRAD2Q5SZI1 272 aa2.1□□□□□ -2.07
SPG11-218ENST00000559754 AKR1C8PQ5T2L2 129 aa2.1□□□□□ -2.07
SPG11-218ENST00000559754 ZNF880Q6PDB4 577 aa2.1□□□□□ -2.07
SPG11-218ENST00000559754 AMTNQ6UX39 209 aa2.1□□□□□ -2.07
SPG11-218ENST00000559754 ZNF695Q8IW36 515 aa2.1□□□□□ -2.07
SPG11-218ENST00000559754 OSR2Q8N2R0 312 aa2.1□□□□□ -2.07
SPG11-218ENST00000559754 STX19Q8N4C7 294 aa2.1□□□□□ -2.07
SPG11-218ENST00000559754 C12orf45Q8N5I9 185 aaPredicted RBP2.1□□□□□ -2.07
SPG11-218ENST00000559754 FNDC9Q8TBE3 224 aa2.1□□□□□ -2.07
SPG11-218ENST00000559754 SPIN2AQ99865 258 aa2.1□□□□□ -2.07
SPG11-218ENST00000559754 SPIN2BQ9BPZ2 258 aa2.1□□□□□ -2.07
SPG11-218ENST00000559754 UPK3BQ9BT76 320 aa2.1□□□□□ -2.07
SPG11-218ENST00000559754 MND1Q9BWT6 205 aa2.1□□□□□ -2.07
SPG11-218ENST00000559754 WDR61Q9GZS3 305 aaKnown RBP2.1□□□□□ -2.07
SPG11-218ENST00000559754 CCDC90BQ9GZT6 254 aa2.1□□□□□ -2.07
SPG11-218ENST00000559754 SH3BGRL3Q9H299 93 aa2.1□□□□□ -2.07
SPG11-218ENST00000559754 LYRM2Q9NU23 88 aaPredicted RBP2.1□□□□□ -2.07
SPG11-218ENST00000559754 FBXL12Q9NXK8 326 aa2.1□□□□□ -2.07
SPG11-218ENST00000559754 PRNDQ9UKY0 176 aa2.1□□□□□ -2.07
SPG11-218ENST00000559754 SNX12Q9UMY4 172 aa2.1□□□□□ -2.07
SPG11-218ENST00000559754 SLC35A3Q9Y2D2 325 aa2.1□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 54 ms